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CSPI03G45570 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G45570
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionGeranylgeranyl transferase type-2 subunit alpha
Genome locationChr3:38976377..38976739
RNA-Seq ExpressionCSPI03G45570
SyntenyCSPI03G45570
Gene Ontology termsGO:0018344 - protein geranylgeranylation (biological process)
GO:0005968 - Rab-protein geranylgeranyltransferase complex (cellular component)
GO:0004663 - Rab geranylgeranyltransferase activity (molecular function)
InterPro domainsIPR002088 - Protein prenyltransferase, alpha subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038661.1 geranylgeranyl transferase type-2 subunit alpha [Cucumis melo var. makuwa]3.4e-2979.07Show/hide
Query:  SALLAKLLSKKASGK---GVVLGEEYELVHQTIFTDPDDQSGWFYHLWLLDQTVKTHLHHLVSSWPPRSLNVALSRTGCLDDHTLS
        S LLAKLL+KKA        VL EEYELVHQ IFTDPDDQSGWFYHLW LDQT+KT+L +LVSSWPPRSL+VALSRTGCLDDHTLS
Subjt:  SALLAKLLSKKASGK---GVVLGEEYELVHQTIFTDPDDQSGWFYHLWLLDQTVKTHLHHLVSSWPPRSLNVALSRTGCLDDHTLS

KAA0052504.1 geranylgeranyl transferase type-2 subunit alpha [Cucumis melo var. makuwa]3.4e-2979.07Show/hide
Query:  SALLAKLLSKKASG---KGVVLGEEYELVHQTIFTDPDDQSGWFYHLWLLDQTVKTHLHHLVSSWPPRSLNVALSRTGCLDDHTLS
        SALLAKLL++KA G      VL EEYELVHQ IFTDPDDQSGWFYHLWLLDQTVKT+  +LVSSWPP S NVALSRTGCLD+HTLS
Subjt:  SALLAKLLSKKASG---KGVVLGEEYELVHQTIFTDPDDQSGWFYHLWLLDQTVKTHLHHLVSSWPPRSLNVALSRTGCLDDHTLS

XP_008439572.1 PREDICTED: geranylgeranyl transferase type-2 subunit alpha [Cucumis melo]3.4e-2979.07Show/hide
Query:  SALLAKLLSKKASG---KGVVLGEEYELVHQTIFTDPDDQSGWFYHLWLLDQTVKTHLHHLVSSWPPRSLNVALSRTGCLDDHTLS
        SALLAKLL++KA G      VL EEYELVHQ IFTDPDDQSGWFYHLWLLDQTVKT+  +LVSSWPP S NVALSRTGCLD+HTLS
Subjt:  SALLAKLLSKKASG---KGVVLGEEYELVHQTIFTDPDDQSGWFYHLWLLDQTVKTHLHHLVSSWPPRSLNVALSRTGCLDDHTLS

XP_022136662.1 geranylgeranyl transferase type-2 subunit alpha 1 [Momordica charantia]2.9e-2877.27Show/hide
Query:  SALLAKLLSKKAS---GKGVVLGEEYELVHQTIFTDPDDQSGWFYHLWLLDQTVKTHLHHLVSSWPPRSLNVALSRTGCLDDHTLSHL
        SALL KLL+KKA        VL EEY+LVHQ IFTDPDDQSGWFYHLWLLDQTVKT+   LVSSWPP S NVALSRTGCLDDHTLS L
Subjt:  SALLAKLLSKKAS---GKGVVLGEEYELVHQTIFTDPDDQSGWFYHLWLLDQTVKTHLHHLVSSWPPRSLNVALSRTGCLDDHTLSHL

XP_038898631.1 geranylgeranyl transferase type-2 subunit alpha 1 isoform X1 [Benincasa hispida]1.9e-2776.74Show/hide
Query:  SALLAKLLSKKASG---KGVVLGEEYELVHQTIFTDPDDQSGWFYHLWLLDQTVKTHLHHLVSSWPPRSLNVALSRTGCLDDHTLS
        S LLAKLL++KA G      VL EEYELVHQ IFTDPDDQSGWFYHLWLLDQTVKT+  +LVSSWPP S NVALSRTGCLDD  LS
Subjt:  SALLAKLLSKKASG---KGVVLGEEYELVHQTIFTDPDDQSGWFYHLWLLDQTVKTHLHHLVSSWPPRSLNVALSRTGCLDDHTLS

TrEMBL top hitse value%identityAlignment
A0A0A0LE25 Geranylgeranyl transferase type-2 subunit alpha2.1e-5698.21Show/hide
Query:  SALLAKLLSKKASGKGVVLGEEYELVHQTIFTDPDDQSGWFYHLWLLDQTVKTHLHHLVSSWPPRSLNVALSRTGCLDDHTLSHLVVSFRIQENYSSFFT
        SALLAKLLSKKASGKGVVLGEEYELVHQTIFTDPDD+SGWFYHLWLLDQTVKTHLHHLVSSWPPRSLNVALSRTGCLDDHTLSHLVVSFRIQENYSSFFT
Subjt:  SALLAKLLSKKASGKGVVLGEEYELVHQTIFTDPDDQSGWFYHLWLLDQTVKTHLHHLVSSWPPRSLNVALSRTGCLDDHTLSHLVVSFRIQENYSSFFT

Query:  LINLFKVSTHLQ
        LINLFK STHLQ
Subjt:  LINLFKVSTHLQ

A0A1S3AZP9 geranylgeranyl transferase type-2 subunit alpha1.7e-2979.07Show/hide
Query:  SALLAKLLSKKASG---KGVVLGEEYELVHQTIFTDPDDQSGWFYHLWLLDQTVKTHLHHLVSSWPPRSLNVALSRTGCLDDHTLS
        SALLAKLL++KA G      VL EEYELVHQ IFTDPDDQSGWFYHLWLLDQTVKT+  +LVSSWPP S NVALSRTGCLD+HTLS
Subjt:  SALLAKLLSKKASG---KGVVLGEEYELVHQTIFTDPDDQSGWFYHLWLLDQTVKTHLHHLVSSWPPRSLNVALSRTGCLDDHTLS

A0A5A7UAV7 Geranylgeranyl transferase type-2 subunit alpha1.7e-2979.07Show/hide
Query:  SALLAKLLSKKASG---KGVVLGEEYELVHQTIFTDPDDQSGWFYHLWLLDQTVKTHLHHLVSSWPPRSLNVALSRTGCLDDHTLS
        SALLAKLL++KA G      VL EEYELVHQ IFTDPDDQSGWFYHLWLLDQTVKT+  +LVSSWPP S NVALSRTGCLD+HTLS
Subjt:  SALLAKLLSKKASG---KGVVLGEEYELVHQTIFTDPDDQSGWFYHLWLLDQTVKTHLHHLVSSWPPRSLNVALSRTGCLDDHTLS

A0A5D3E6U6 Geranylgeranyl transferase type-2 subunit alpha1.7e-2979.07Show/hide
Query:  SALLAKLLSKKASGK---GVVLGEEYELVHQTIFTDPDDQSGWFYHLWLLDQTVKTHLHHLVSSWPPRSLNVALSRTGCLDDHTLS
        S LLAKLL+KKA        VL EEYELVHQ IFTDPDDQSGWFYHLW LDQT+KT+L +LVSSWPPRSL+VALSRTGCLDDHTLS
Subjt:  SALLAKLLSKKASGK---GVVLGEEYELVHQTIFTDPDDQSGWFYHLWLLDQTVKTHLHHLVSSWPPRSLNVALSRTGCLDDHTLS

A0A6J1C629 geranylgeranyl transferase type-2 subunit alpha 11.4e-2877.27Show/hide
Query:  SALLAKLLSKKAS---GKGVVLGEEYELVHQTIFTDPDDQSGWFYHLWLLDQTVKTHLHHLVSSWPPRSLNVALSRTGCLDDHTLSHL
        SALL KLL+KKA        VL EEY+LVHQ IFTDPDDQSGWFYHLWLLDQTVKT+   LVSSWPP S NVALSRTGCLDDHTLS L
Subjt:  SALLAKLLSKKAS---GKGVVLGEEYELVHQTIFTDPDDQSGWFYHLWLLDQTVKTHLHHLVSSWPPRSLNVALSRTGCLDDHTLSHL

SwissProt top hitse value%identityAlignment
O94412 Geranylgeranyl transferase type-2 subunit alpha9.4e-0642.31Show/hide
Query:  SKKASGKGVVLGEEYELVHQTIFTDPDDQSGWFYHLWLLDQTVKTHLHHLVS
        S+KA  K  +L +E +++HQ +FTDPDD S W YH WL+       +  L+S
Subjt:  SKKASGKGVVLGEEYELVHQTIFTDPDDQSGWFYHLWLLDQTVKTHLHHLVS

Q5EA80 Geranylgeranyl transferase type-2 subunit alpha1.0e-0466.67Show/hide
Query:  VLGEEYELVHQTIFTDPDDQSGWFYHLWLL
        VL +E ELV    FTDP+DQS WFYH WLL
Subjt:  VLGEEYELVHQTIFTDPDDQSGWFYHLWLL

Q8VYB7 Geranylgeranyl transferase type-2 subunit alpha 16.3e-1853.16Show/hide
Query:  SALLAKLLSKKASG--KGVVLGEEYELVHQTIFTDPDDQSGWFYHLWLLDQTVKTHLHHLVSSWPPRSLNVALSRTGCL
        S LL+ LL++ A G    + + EEY+ VH  IFT+PDDQSGWFYHLWLLDQT+      L SSWP    ++ LS  GCL
Subjt:  SALLAKLLSKKASG--KGVVLGEEYELVHQTIFTDPDDQSGWFYHLWLLDQTVKTHLHHLVSSWPPRSLNVALSRTGCL

Q92696 Geranylgeranyl transferase type-2 subunit alpha1.0e-0466.67Show/hide
Query:  VLGEEYELVHQTIFTDPDDQSGWFYHLWLL
        VL +E ELV    FTDP+DQS WFYH WLL
Subjt:  VLGEEYELVHQTIFTDPDDQSGWFYHLWLL

Q9FJ32 Geranylgeranyl transferase type-2 subunit alpha 27.4e-1139.56Show/hide
Query:  SALLAKLLSKKASG--KGVVLGEEYELVHQTIFTDPDDQSGWFYHLWLLDQTVKTHLHHLVSSWPPRSLNVALSRTGCLDDHTLSHLVVSF
        S L++ L++KKA G      +  E + VH  IFT  + QSGWFY+LWLLDQTVK  +    SSWP     + LS   C +  + +  + +F
Subjt:  SALLAKLLSKKASG--KGVVLGEEYELVHQTIFTDPDDQSGWFYHLWLLDQTVKTHLHHLVSSWPPRSLNVALSRTGCLDDHTLSHLVVSF

Arabidopsis top hitse value%identityAlignment
AT4G24490.1 RAB geranylgeranyl transferase alpha subunit 14.5e-1953.16Show/hide
Query:  SALLAKLLSKKASG--KGVVLGEEYELVHQTIFTDPDDQSGWFYHLWLLDQTVKTHLHHLVSSWPPRSLNVALSRTGCL
        S LL+ LL++ A G    + + EEY+ VH  IFT+PDDQSGWFYHLWLLDQT+      L SSWP    ++ LS  GCL
Subjt:  SALLAKLLSKKASG--KGVVLGEEYELVHQTIFTDPDDQSGWFYHLWLLDQTVKTHLHHLVSSWPPRSLNVALSRTGCL

AT4G24490.2 RAB geranylgeranyl transferase alpha subunit 14.5e-1953.16Show/hide
Query:  SALLAKLLSKKASG--KGVVLGEEYELVHQTIFTDPDDQSGWFYHLWLLDQTVKTHLHHLVSSWPPRSLNVALSRTGCL
        S LL+ LL++ A G    + + EEY+ VH  IFT+PDDQSGWFYHLWLLDQT+      L SSWP    ++ LS  GCL
Subjt:  SALLAKLLSKKASG--KGVVLGEEYELVHQTIFTDPDDQSGWFYHLWLLDQTVKTHLHHLVSSWPPRSLNVALSRTGCL

AT5G41820.1 RAB geranylgeranyl transferase alpha subunit 25.3e-1239.56Show/hide
Query:  SALLAKLLSKKASG--KGVVLGEEYELVHQTIFTDPDDQSGWFYHLWLLDQTVKTHLHHLVSSWPPRSLNVALSRTGCLDDHTLSHLVVSF
        S L++ L++KKA G      +  E + VH  IFT  + QSGWFY+LWLLDQTVK  +    SSWP     + LS   C +  + +  + +F
Subjt:  SALLAKLLSKKASG--KGVVLGEEYELVHQTIFTDPDDQSGWFYHLWLLDQTVKTHLHHLVSSWPPRSLNVALSRTGCLDDHTLSHLVVSF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCGTCGTACTCTACCTTCTTTATAGTGCGCTTCTTGCCAAATTACTGAGCAAAAAGGCCAGTGGAAAAGGTGTAGTGTTAGGTGAGGAATATGAACTCGTGCACCA
AACTATTTTCACTGATCCGGATGATCAAAGTGGTTGGTTTTATCATCTTTGGCTTCTGGATCAAACGGTGAAAACGCATCTTCATCACCTTGTTTCTTCTTGGCCACCTC
GTAGTCTTAATGTAGCATTATCACGAACTGGATGTTTAGATGATCACACTCTCTCTCATTTAGTAGTTTCCTTTCGGATTCAGGAAAATTACTCCTCATTCTTTACTTTG
ATCAACCTGTTCAAGGTGTCGACTCATCTTCAG
mRNA sequenceShow/hide mRNA sequence
ATGTGCGTCGTACTCTACCTTCTTTATAGTGCGCTTCTTGCCAAATTACTGAGCAAAAAGGCCAGTGGAAAAGGTGTAGTGTTAGGTGAGGAATATGAACTCGTGCACCA
AACTATTTTCACTGATCCGGATGATCAAAGTGGTTGGTTTTATCATCTTTGGCTTCTGGATCAAACGGTGAAAACGCATCTTCATCACCTTGTTTCTTCTTGGCCACCTC
GTAGTCTTAATGTAGCATTATCACGAACTGGATGTTTAGATGATCACACTCTCTCTCATTTAGTAGTTTCCTTTCGGATTCAGGAAAATTACTCCTCATTCTTTACTTTG
ATCAACCTGTTCAAGGTGTCGACTCATCTTCAG
Protein sequenceShow/hide protein sequence
MCVVLYLLYSALLAKLLSKKASGKGVVLGEEYELVHQTIFTDPDDQSGWFYHLWLLDQTVKTHLHHLVSSWPPRSLNVALSRTGCLDDHTLSHLVVSFRIQENYSSFFTL
INLFKVSTHLQ