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CSPI03G45720 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G45720
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionBEST Arabidopsis thaliana protein match is: NHL domain-containing protein .
Genome locationChr3:39135854..39136162
RNA-Seq ExpressionCSPI03G45720
SyntenyCSPI03G45720
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG2698660.1 hypothetical protein I3760_07G160100 [Carya illinoinensis]1.7e-0543.48Show/hide
Query:  KEETMSCWERLRMKILSRKKEGNINNKNDTNITCMGGETSGLNNRSGGLFKYDALSYAKNFDEGLANADGEGSFRSFSARYAVP-SKPPAKK
        KE  +SCW RL++K+   ++     N             S +  + GG FKYD LSYA+NFDEG  + D E   R FSARYA P SKPP  K
Subjt:  KEETMSCWERLRMKILSRKKEGNINNKNDTNITCMGGETSGLNNRSGGLFKYDALSYAKNFDEGLANADGEGSFRSFSARYAVP-SKPPAKK

KAG6591707.1 hypothetical protein SDJN03_14053, partial [Cucurbita argyrosperma subsp. sororia]2.1e-1155.21Show/hide
Query:  EKQKNKEETMSCWERLRMKILSRKKEGNINNKNDTNITCMGGETSGLNNRSGGLFKYDALSYAKNFDEGLANADGEGSFRSFSARYAVPSKPPAKK
        EK+K+K ETMS W+ L+ KI S KKEG   +KN+                  G F YDA+SYA+NFD+GL NAD EGS RSFSARYAV SKPP KK
Subjt:  EKQKNKEETMSCWERLRMKILSRKKEGNINNKNDTNITCMGGETSGLNNRSGGLFKYDALSYAKNFDEGLANADGEGSFRSFSARYAVPSKPPAKK

KAG6608120.1 hypothetical protein SDJN03_01462, partial [Cucurbita argyrosperma subsp. sororia]2.1e-1150.51Show/hide
Query:  MKKAEKQKNKEETMSCWERLRMKILSRKKEGNINNKNDTNITCMGGETSGLNNRSGGLFKYDALSYAKNFDEGLANADGEGSFRSFSARYAVPSKPPAK
        M+K+E QK+ EE +SCW RL++K+L  K+EG        N  C+ G+T  LN    G F+YDALSYA+NFDEGL + D E   R FSARY   SKP  K
Subjt:  MKKAEKQKNKEETMSCWERLRMKILSRKKEGNINNKNDTNITCMGGETSGLNNRSGGLFKYDALSYAKNFDEGLANADGEGSFRSFSARYAVPSKPPAK

KAG7024589.1 hypothetical protein SDJN02_13407, partial [Cucurbita argyrosperma subsp. argyrosperma]1.9e-1255.21Show/hide
Query:  EKQKNKEETMSCWERLRMKILSRKKEGNINNKNDTNITCMGGETSGLNNRSGGLFKYDALSYAKNFDEGLANADGEGSFRSFSARYAVPSKPPAKK
        EK+K+K ET S W+ L+ KI S KKEG   +KN+                  G F YDA+SYA+NFD+GLANAD EGS RSFSARYAV SKPP KK
Subjt:  EKQKNKEETMSCWERLRMKILSRKKEGNINNKNDTNITCMGGETSGLNNRSGGLFKYDALSYAKNFDEGLANADGEGSFRSFSARYAVPSKPPAKK

KGN60281.1 hypothetical protein Csa_002688 [Cucumis sativus]9.6e-49100Show/hide
Query:  MKKAEKQKNKEETMSCWERLRMKILSRKKEGNINNKNDTNITCMGGETSGLNNRSGGLFKYDALSYAKNFDEGLANADGEGSFRSFSARYAVPSKPPAKK
        MKKAEKQKNKEETMSCWERLRMKILSRKKEGNINNKNDTNITCMGGETSGLNNRSGGLFKYDALSYAKNFDEGLANADGEGSFRSFSARYAVPSKPPAKK
Subjt:  MKKAEKQKNKEETMSCWERLRMKILSRKKEGNINNKNDTNITCMGGETSGLNNRSGGLFKYDALSYAKNFDEGLANADGEGSFRSFSARYAVPSKPPAKK

Query:  LG
        LG
Subjt:  LG

TrEMBL top hitse value%identityAlignment
A0A059BR02 Uncharacterized protein4.1e-0537Show/hide
Query:  KAEKQKNKEETMSCWERLRMKILSRKKEGNINNKNDT---NITCMGGET--SGLNNRSGGLFKYDALSYAKNFDEGLANADGEGSFRSFSARYAVPSKPP
        + E   NK    SCW RL++K+   ++ G    ++ +   N+ C    T  S    +  G F+YD LSY++NFD+G   ADG+   R FS RYA P  PP
Subjt:  KAEKQKNKEETMSCWERLRMKILSRKKEGNINNKNDT---NITCMGGET--SGLNNRSGGLFKYDALSYAKNFDEGLANADGEGSFRSFSARYAVPSKPP

A0A0A0LJR5 Uncharacterized protein4.7e-49100Show/hide
Query:  MKKAEKQKNKEETMSCWERLRMKILSRKKEGNINNKNDTNITCMGGETSGLNNRSGGLFKYDALSYAKNFDEGLANADGEGSFRSFSARYAVPSKPPAKK
        MKKAEKQKNKEETMSCWERLRMKILSRKKEGNINNKNDTNITCMGGETSGLNNRSGGLFKYDALSYAKNFDEGLANADGEGSFRSFSARYAVPSKPPAKK
Subjt:  MKKAEKQKNKEETMSCWERLRMKILSRKKEGNINNKNDTNITCMGGETSGLNNRSGGLFKYDALSYAKNFDEGLANADGEGSFRSFSARYAVPSKPPAKK

Query:  LG
        LG
Subjt:  LG

A0A1R3FYB4 Uncharacterized protein1.4e-0539.56Show/hide
Query:  KQKNKEETMSCWERLRMKI-LSRKKEGNINNKNDTNITCMGGETSGLNNRSGGLFKYDALSYAKNFDEGLANADGEGS-FRSFSARYAVPS
        K  N+E  +SCW RL++K+  ++++  N+ N        +       N +  G F+YD LSYA+NFD+G  + D EGS +R FS+RYA PS
Subjt:  KQKNKEETMSCWERLRMKI-LSRKKEGNINNKNDTNITCMGGETSGLNNRSGGLFKYDALSYAKNFDEGLANADGEGS-FRSFSARYAVPS

A0A1R3GHI4 Uncharacterized protein8.3e-0639.56Show/hide
Query:  KQKNKEETMSCWERLRMKI-LSRKKEGNINNKNDTNITCMGGETSGLNNRSGGLFKYDALSYAKNFDEGLANADGEGS-FRSFSARYAVPS
        K  N+E ++SCW RL++K+  ++++  N+ N        +       N +  G F+YD LSYA+NFD+G  + D EGS +R FS+RYA PS
Subjt:  KQKNKEETMSCWERLRMKI-LSRKKEGNINNKNDTNITCMGGETSGLNNRSGGLFKYDALSYAKNFDEGLANADGEGS-FRSFSARYAVPS

A0A7J8Y1V8 Uncharacterized protein5.4e-0538.46Show/hide
Query:  NKEETMSCWERLRMKILSRKKEGNINNKNDTNITCMGGETSGL----NNRSGGLFKYDALSYAKNFDEGLANADGEGS-FRSFSARYAVPS
        N+E+ +SCW RL++K+   K++          I  +G   +        R  G FKYD LSYA+NFD+G  + D EG+ +  FS+RYA PS
Subjt:  NKEETMSCWERLRMKILSRKKEGNINNKNDTNITCMGGETSGL----NNRSGGLFKYDALSYAKNFDEGLANADGEGS-FRSFSARYAVPS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G01430.1 BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:AT5G14890.1)9.1e-0543.55Show/hide
Query:  CMGGETSGLNNRSG--GLFKYDALSYAKNFDEG--LANADGEGSFRSFSARYAVPSKPPAKK
        C GG    + NRS   G F+YD LSY+ NFD+G    + D E  +R +S R+A PS P + K
Subjt:  CMGGETSGLNNRSG--GLFKYDALSYAKNFDEG--LANADGEGSFRSFSARYAVPSKPPAKK

AT5G14890.1 NHL domain-containing protein2.0e-0431.87Show/hide
Query:  MSCWERLR--MKILSRKKEGNINNKNDTNITCMGGETSGLNNRSGGLFKYDALSYAKNFDEG--LANADGEGSFRSFSARYAVPSKPPAKK
        +S W ++R   +I++  K      +   N  C GG   G N      F+YD+ SY+ NFD+G    + + E  +R +S R+A PS P + K
Subjt:  MSCWERLR--MKILSRKKEGNINNKNDTNITCMGGETSGLNNRSGGLFKYDALSYAKNFDEG--LANADGEGSFRSFSARYAVPSKPPAKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAAGCAGAGAAACAAAAAAACAAAGAAGAAACAATGTCATGTTGGGAGCGTTTGAGGATGAAGATTTTGTCGAGAAAAAAAGAGGGAAATATCAACAACAAGAA
TGATACTAATATTACGTGCATGGGAGGTGAGACAAGTGGATTGAATAATCGGAGTGGGGGATTATTCAAGTATGACGCACTAAGCTACGCTAAAAATTTCGACGAGGGGT
TGGCTAATGCTGACGGAGAAGGATCCTTTCGAAGTTTTTCTGCAAGATACGCTGTTCCTTCCAAACCCCCAGCTAAGAAGTTAGGATAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAAGCAGAGAAACAAAAAAACAAAGAAGAAACAATGTCATGTTGGGAGCGTTTGAGGATGAAGATTTTGTCGAGAAAAAAAGAGGGAAATATCAACAACAAGAA
TGATACTAATATTACGTGCATGGGAGGTGAGACAAGTGGATTGAATAATCGGAGTGGGGGATTATTCAAGTATGACGCACTAAGCTACGCTAAAAATTTCGACGAGGGGT
TGGCTAATGCTGACGGAGAAGGATCCTTTCGAAGTTTTTCTGCAAGATACGCTGTTCCTTCCAAACCCCCAGCTAAGAAGTTAGGATAA
Protein sequenceShow/hide protein sequence
MKKAEKQKNKEETMSCWERLRMKILSRKKEGNINNKNDTNITCMGGETSGLNNRSGGLFKYDALSYAKNFDEGLANADGEGSFRSFSARYAVPSKPPAKKLG