CuGenDBv2

Gene ID	CSPI03G46250
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Retrotransposon-derived protein PEG10, putative
Genome location	Chr3:39531021..39531700
RNA-Seq Expression	CSPI03G46250
Synteny	CSPI03G46250
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0038606.1 putative Retrotransposon-derived protein PEG10 [Cucumis melo var. makuwa]

5.0e-37

92.16

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Query:  MEDVEAETKDEAMRGSKTAIRCAKAAFLLSSLKSSQNRQLRATVHEQAKERKMLGKTVEDLKIQLARERMRNKRIKLCGLMEFVLQLLLVISLSSLFLFA
        ME+VEAE+KDEAMRGSKTAIRCAKAAFLLSSLKSSQNRQLRAT HEQAKERKML KTV DLKIQLARER+RNKRIKLCGLMEFVLQLLLVISLSSL LF 
Subjt:  MEDVEAETKDEAMRGSKTAIRCAKAAFLLSSLKSSQNRQLRATVHEQAKERKMLGKTVEDLKIQLARERMRNKRIKLCGLMEFVLQLLLVISLSSLFLFA

Query:  AF
        AF
Subjt:  AF

KAG7031715.1 hypothetical protein SDJN02_05756, partial [Cucurbita argyrosperma subsp. argyrosperma]

4.7e-27

76.47

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Query:  MEDVEAETKDEAMRGSKTAIRCAKAAFLLSSLKSSQNRQLRATVHEQAKERKMLGKTVEDLKIQLARERMRNKRIKLCGLMEFVLQLLLVISLSSLFLFA
        ME VEAE++DEAMR SKTA RCAKAAFL+SS KS QNR LRA+V E+AKE++ L K V DLKI+LA ER RN+RIKLCGLMEFVLQLLLVISLSS FLF 
Subjt:  MEDVEAETKDEAMRGSKTAIRCAKAAFLLSSLKSSQNRQLRATVHEQAKERKMLGKTVEDLKIQLARERMRNKRIKLCGLMEFVLQLLLVISLSSLFLFA

Query:  AF
        AF
Subjt:  AF

XP_011652624.1 uncharacterized protein LOC105435036 [Cucumis sativus]

1.4e-39

95.1

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Query:  MEDVEAETKDEAMRGSKTAIRCAKAAFLLSSLKSSQNRQLRATVHEQAKERKMLGKTVEDLKIQLARERMRNKRIKLCGLMEFVLQLLLVISLSSLFLFA
        MEDVEAETK+EAMRGSKTAIRCAKAAFLLSSLKSSQNRQLRATVHEQAKE+KMLGKTV DLKIQLARER+RNKRIKLCGLMEFVLQLLLV+SLSSLFLFA
Subjt:  MEDVEAETKDEAMRGSKTAIRCAKAAFLLSSLKSSQNRQLRATVHEQAKERKMLGKTVEDLKIQLARERMRNKRIKLCGLMEFVLQLLLVISLSSLFLFA

Query:  AF
        AF
Subjt:  AF

XP_022138206.1 uncharacterized protein LOC111009432 [Momordica charantia]

2.7e-27

74.51

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Query:  MEDVEAETKDEAMRGSKTAIRCAKAAFLLSSLKSSQNRQLRATVHEQAKERKMLGKTVEDLKIQLARERMRNKRIKLCGLMEFVLQLLLVISLSSLFLFA
        ME VEAE++DEAMR S+TA RCAKAAF+LSSLKSSQN  LRATV+E  KE++ L KT+ DLK++LARER+RNKRIKLCGLMEFVLQ+LLVI+LSS F F 
Subjt:  MEDVEAETKDEAMRGSKTAIRCAKAAFLLSSLKSSQNRQLRATVHEQAKERKMLGKTVEDLKIQLARERMRNKRIKLCGLMEFVLQLLLVISLSSLFLFA

Query:  AF
        AF
Subjt:  AF

XP_022940284.1 uncharacterized protein LOC111445952 [Cucurbita moschata]

9.4e-28

78.43

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Query:  MEDVEAETKDEAMRGSKTAIRCAKAAFLLSSLKSSQNRQLRATVHEQAKERKMLGKTVEDLKIQLARERMRNKRIKLCGLMEFVLQLLLVISLSSLFLFA
        ME VEAE++DEAMR SKTA RCAKAAFL+SS KS QNR LRA+V EQAKE++ L K V DLKI+LA ER RNKRIKLCGLMEFVLQLLLVISLSS FLF 
Subjt:  MEDVEAETKDEAMRGSKTAIRCAKAAFLLSSLKSSQNRQLRATVHEQAKERKMLGKTVEDLKIQLARERMRNKRIKLCGLMEFVLQLLLVISLSSLFLFA

Query:  AF
        AF
Subjt:  AF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LJY1 Uncharacterized protein

6.7e-40

95.1

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Query:  MEDVEAETKDEAMRGSKTAIRCAKAAFLLSSLKSSQNRQLRATVHEQAKERKMLGKTVEDLKIQLARERMRNKRIKLCGLMEFVLQLLLVISLSSLFLFA
        MEDVEAETK+EAMRGSKTAIRCAKAAFLLSSLKSSQNRQLRATVHEQAKE+KMLGKTV DLKIQLARER+RNKRIKLCGLMEFVLQLLLV+SLSSLFLFA
Subjt:  MEDVEAETKDEAMRGSKTAIRCAKAAFLLSSLKSSQNRQLRATVHEQAKERKMLGKTVEDLKIQLARERMRNKRIKLCGLMEFVLQLLLVISLSSLFLFA

Query:  AF
        AF
Subjt:  AF

A0A5D3E7E0 Putative Retrotransposon-derived protein PEG10

2.4e-37

92.16

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Query:  MEDVEAETKDEAMRGSKTAIRCAKAAFLLSSLKSSQNRQLRATVHEQAKERKMLGKTVEDLKIQLARERMRNKRIKLCGLMEFVLQLLLVISLSSLFLFA
        ME+VEAE+KDEAMRGSKTAIRCAKAAFLLSSLKSSQNRQLRAT HEQAKERKML KTV DLKIQLARER+RNKRIKLCGLMEFVLQLLLVISLSSL LF 
Subjt:  MEDVEAETKDEAMRGSKTAIRCAKAAFLLSSLKSSQNRQLRATVHEQAKERKMLGKTVEDLKIQLARERMRNKRIKLCGLMEFVLQLLLVISLSSLFLFA

Query:  AF
        AF
Subjt:  AF

A0A6A1UUX9 Uncharacterized protein

1.4e-16

53.47

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Query:  MEDVEAETKDEAMRGSKTAIRCAKAAFLLSSLKSSQNRQLRATVHEQAKERKMLGKTVEDLKIQLARERMRNKRIKLCGLMEFVLQLLLVISLSSLFLFA
        +E +E ETK EA++ SK  IRCAKAAFLLS+LKS  N  + +T  +Q +E +M+ + +E+LK++LARER++NK++KLCGLME VLQ+ +V+SLS+ F   
Subjt:  MEDVEAETKDEAMRGSKTAIRCAKAAFLLSSLKSSQNRQLRATVHEQAKERKMLGKTVEDLKIQLARERMRNKRIKLCGLMEFVLQLLLVISLSSLFLFA

Query:  A
        A
Subjt:  A

A0A6J1C920 uncharacterized protein LOC111009432

1.3e-27

74.51

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Query:  MEDVEAETKDEAMRGSKTAIRCAKAAFLLSSLKSSQNRQLRATVHEQAKERKMLGKTVEDLKIQLARERMRNKRIKLCGLMEFVLQLLLVISLSSLFLFA
        ME VEAE++DEAMR S+TA RCAKAAF+LSSLKSSQN  LRATV+E  KE++ L KT+ DLK++LARER+RNKRIKLCGLMEFVLQ+LLVI+LSS F F 
Subjt:  MEDVEAETKDEAMRGSKTAIRCAKAAFLLSSLKSSQNRQLRATVHEQAKERKMLGKTVEDLKIQLARERMRNKRIKLCGLMEFVLQLLLVISLSSLFLFA

Query:  AF
        AF
Subjt:  AF

A0A6J1FJM5 uncharacterized protein LOC111445952

4.5e-28

78.43

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Query:  MEDVEAETKDEAMRGSKTAIRCAKAAFLLSSLKSSQNRQLRATVHEQAKERKMLGKTVEDLKIQLARERMRNKRIKLCGLMEFVLQLLLVISLSSLFLFA
        ME VEAE++DEAMR SKTA RCAKAAFL+SS KS QNR LRA+V EQAKE++ L K V DLKI+LA ER RNKRIKLCGLMEFVLQLLLVISLSS FLF 
Subjt:  MEDVEAETKDEAMRGSKTAIRCAKAAFLLSSLKSSQNRQLRATVHEQAKERKMLGKTVEDLKIQLARERMRNKRIKLCGLMEFVLQLLLVISLSSLFLFA

Query:  AF
        AF
Subjt:  AF

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G78172.1 unknown protein

2.0e-07

42.86

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Query:  TKDEAMRGSKTAIRCAKAAFLLSSLKSSQNRQLRATVHEQAKERKMLGKTVEDLKIQLARERMRNKRIKLCGLMEFVLQLLLVISLSSLFL
        +KDE  R   TAIRCA+A  LL SL SS+         E+ + R    + +EDL+ +L   +++  RIKLCGLME +L + LV+ LS+ FL
Subjt:  TKDEAMRGSKTAIRCAKAAFLLSSLKSSQNRQLRATVHEQAKERKMLGKTVEDLKIQLARERMRNKRIKLCGLMEFVLQLLLVISLSSLFL

Sequences

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CDS sequence

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ATGGAGGACGTTGAAGCGGAAACCAAAGACGAAGCAATGCGAGGATCCAAAACCGCCATTCGATGTGCAAAAGCAGCTTTTCTACTTTCTTCACTCAAGTCCTCCCAAAA
TCGCCAACTCAGAGCCACTGTTCATGAACAAGCCAAGGAGAGAAAGATGCTGGGGAAAACTGTGGAGGATTTGAAGATCCAGTTGGCTAGGGAGCGTATGAGGAATAAGA
GGATCAAACTCTGCGGTTTGATGGAATTTGTTCTTCAGCTTCTGCTGGTTATCTCTCTTTCGAGTTTATTCCTTTTTGCTGCCTTTTGA

mRNA sequence

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AAACTGCAATGCAATAAGCTTCTTGTAGTGTTACGACAGATTACCTTCATAATTTCTTTCGATCAGTTGTAGTGTACGTAGCAGAAATCATGGAGGACGTTGAAGCGGAA
ACCAAAGACGAAGCAATGCGAGGATCCAAAACCGCCATTCGATGTGCAAAAGCAGCTTTTCTACTTTCTTCACTCAAGTCCTCCCAAAATCGCCAACTCAGAGCCACTGT
TCATGAACAAGCCAAGGAGAGAAAGATGCTGGGGAAAACTGTGGAGGATTTGAAGATCCAGTTGGCTAGGGAGCGTATGAGGAATAAGAGGATCAAACTCTGCGGTTTGA
TGGAATTTGTTCTTCAGCTTCTGCTGGTTATCTCTCTTTCGAGTTTATTCCTTTTTGCTGCCTTTTGATTTGTTTGAGTTCTGATGGAATAATAGTGGATAGTAGTCAGT
TCATGAATTACATCACTGGATTCATCATCGTCTTCCATTGTTGTTATGTAGTTATTTTAGCTTAGGTTTTTGAATGTATGAAGAATTTCTTCGGCGAGA

Protein sequence

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MEDVEAETKDEAMRGSKTAIRCAKAAFLLSSLKSSQNRQLRATVHEQAKERKMLGKTVEDLKIQLARERMRNKRIKLCGLMEFVLQLLLVISLSSLFLFAAF

CSPI03G46250 (gene) of Cucumber (PI 183967) v1 genome