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CSPI03G46480 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G46480
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRibosome maturation factor
Genome locationChr3:39728299..39729678
RNA-Seq ExpressionCSPI03G46480
SyntenyCSPI03G46480
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136199.1 uncharacterized protein LOC101212292 isoform X2 [Cucumis sativus]3.3e-8099.37Show/hide
Query:  MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA
        MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA
Subjt:  MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA

Query:  QFHGFKHPSQQLAEIKADGDELILPKKGNILAIQSFRNLKEIEKSYSLKSRPPRKLADF
        QFHGFKHPSQQL EIKADGDELILPKKGNILAIQSFRNLKEIEKSYSLKSRPPRKLADF
Subjt:  QFHGFKHPSQQLAEIKADGDELILPKKGNILAIQSFRNLKEIEKSYSLKSRPPRKLADF
XP_008466004.1 PREDICTED: uncharacterized protein LOC103503567 isoform X1 [Cucumis melo]2.4e-7897.5Show/hide
Query:  MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA
        MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA
Subjt:  MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA

Query:  QFHGFKHPSQQLAEIKA-DGDELILPKKGNILAIQSFRNLKEIEKSYSLKSRPPRKLADF
        QFHGFK PSQQLAEIKA DG ELILPKKGNILAIQSFRNLKEIEKS+SLKSRPPRKLADF
Subjt:  QFHGFKHPSQQLAEIKA-DGDELILPKKGNILAIQSFRNLKEIEKSYSLKSRPPRKLADF
XP_008466005.1 PREDICTED: uncharacterized protein LOC103503567 isoform X2 [Cucumis melo]1.7e-7696.88Show/hide
Query:  MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA
        MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA
Subjt:  MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA

Query:  QFHGFKHPSQQLAEIKA-DGDELILPKKGNILAIQSFRNLKEIEKSYSLKSRPPRKLADF
        QFHGFK PSQQL EIKA DG ELILPKKGNILAIQSFRNLKEIEKS+SLKSRPPRKLADF
Subjt:  QFHGFKHPSQQLAEIKA-DGDELILPKKGNILAIQSFRNLKEIEKSYSLKSRPPRKLADF
XP_011652641.1 uncharacterized protein LOC101212292 isoform X1 [Cucumis sativus]4.6e-82100Show/hide
Query:  MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA
        MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA
Subjt:  MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA

Query:  QFHGFKHPSQQLAEIKADGDELILPKKGNILAIQSFRNLKEIEKSYSLKSRPPRKLADF
        QFHGFKHPSQQLAEIKADGDELILPKKGNILAIQSFRNLKEIEKSYSLKSRPPRKLADF
Subjt:  QFHGFKHPSQQLAEIKADGDELILPKKGNILAIQSFRNLKEIEKSYSLKSRPPRKLADF
XP_038888243.1 uncharacterized protein LOC120078100 [Benincasa hispida]4.8e-7190.06Show/hide
Query:  MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA
        MQRQSLGSPVSKLHGHGAGAKSDE PADDQKRKKHSPSSSSI NY GQDDD++SKSFRFSFPSP PPRQEK VHAIPILTIICFLILY  SH+PSQSDLA
Subjt:  MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA

Query:  QFHGFKHPSQQLAEIKADGDELILPKKGNILAIQSFRNLKEIEKSY--SLKSRPPRKLADF
        QFHGFK P++QL EIKADGDELILPKKGNILAIQSFRNLKEIEKSY  SLKSRPPRKLADF
Subjt:  QFHGFKHPSQQLAEIKADGDELILPKKGNILAIQSFRNLKEIEKSY--SLKSRPPRKLADF
TrEMBL top hitse value%identityAlignment
A0A0A0LE94 Uncharacterized protein1.6e-8099.37Show/hide
Query:  MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA
        MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA
Subjt:  MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA

Query:  QFHGFKHPSQQLAEIKADGDELILPKKGNILAIQSFRNLKEIEKSYSLKSRPPRKLADF
        QFHGFKHPSQQL EIKADGDELILPKKGNILAIQSFRNLKEIEKSYSLKSRPPRKLADF
Subjt:  QFHGFKHPSQQLAEIKADGDELILPKKGNILAIQSFRNLKEIEKSYSLKSRPPRKLADF
A0A1S3CQ78 uncharacterized protein LOC103503567 isoform X11.1e-7897.5Show/hide
Query:  MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA
        MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA
Subjt:  MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA

Query:  QFHGFKHPSQQLAEIKA-DGDELILPKKGNILAIQSFRNLKEIEKSYSLKSRPPRKLADF
        QFHGFK PSQQLAEIKA DG ELILPKKGNILAIQSFRNLKEIEKS+SLKSRPPRKLADF
Subjt:  QFHGFKHPSQQLAEIKA-DGDELILPKKGNILAIQSFRNLKEIEKSYSLKSRPPRKLADF
A0A1S3CQJ2 uncharacterized protein LOC103503567 isoform X28.2e-7796.88Show/hide
Query:  MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA
        MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA
Subjt:  MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA

Query:  QFHGFKHPSQQLAEIKA-DGDELILPKKGNILAIQSFRNLKEIEKSYSLKSRPPRKLADF
        QFHGFK PSQQL EIKA DG ELILPKKGNILAIQSFRNLKEIEKS+SLKSRPPRKLADF
Subjt:  QFHGFKHPSQQLAEIKA-DGDELILPKKGNILAIQSFRNLKEIEKSYSLKSRPPRKLADF
A0A5A7T6T2 Uncharacterized protein8.2e-7796.88Show/hide
Query:  MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA
        MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA
Subjt:  MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA

Query:  QFHGFKHPSQQLAEIKA-DGDELILPKKGNILAIQSFRNLKEIEKSYSLKSRPPRKLADF
        QFHGFK PSQQL EIKA DG ELILPKKGNILAIQSFRNLKEIEKS+SLKSRPPRKLADF
Subjt:  QFHGFKHPSQQLAEIKA-DGDELILPKKGNILAIQSFRNLKEIEKSYSLKSRPPRKLADF
A0A6J1HI49 uncharacterized protein LOC111463852 isoform X15.7e-7087.42Show/hide
Query:  MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA
        MQRQSLGSPVSKLHGHGAGAKSD+ P  DQKRKKHSPSSSSI+ Y GQDD+K SKSFRFSFPSPSPPRQE LVHAIPILT+ICFLILYI SH+PSQSDLA
Subjt:  MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLA

Query:  QFHGFKHPSQQLAEIKADGDELILPKKGNILAIQSFRNLKEIEKSYSLKSRPPRKLADF
        QFHGFK PS+QLAEIKADGDELI+PK+GNI+AIQSFRNLKEIEKS SLKSR PRKLADF
Subjt:  QFHGFKHPSQQLAEIKADGDELILPKKGNILAIQSFRNLKEIEKSYSLKSRPPRKLADF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G35470.1 unknown protein1.2e-2447.98Show/hide
Query:  MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSP-SSSSILNYGGQDDDKSSKSFR----FSFPSP---SPPRQEKLVHAIPILTIICFLILYIFSH
        MQR SL S  SKLH +G G K D    DD K    SP SSSS ++Y    DD   K F+     S  SP   +  +QEKLVH IPILT+ICF+ILY+ S+
Subjt:  MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSP-SSSSILNYGGQDDDKSSKSFR----FSFPSP---SPPRQEKLVHAIPILTIICFLILYIFSH

Query:  SPSQSDLAQFHGFKHPSQQLAEIKADGDELILPKKGNILAIQ-SFRNLKEIEKSYSLKSRP-----PRKLADF
        +PSQSDLAQF+GF  PS+ L     +GDE+    + + L+I+ S RNL+E E S++ KS P      RK ADF
Subjt:  SPSQSDLAQFHGFKHPSQQLAEIKADGDELILPKKGNILAIQ-SFRNLKEIEKSYSLKSRP-----PRKLADF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAAGGCAATCTCTAGGTTCACCAGTTTCCAAGCTCCACGGCCATGGCGCCGGAGCAAAGTCCGATGAGGATCCGGCCGACGATCAAAAGCGCAAGAAGCACTCTCC
ATCTTCTTCCTCAATTCTCAACTACGGCGGACAAGACGACGATAAATCCTCTAAATCTTTCCGATTCTCATTTCCCTCGCCTTCTCCTCCGCGCCAAGAGAAGTTAGTTC
ACGCCATACCTATTCTCACCATTATCTGCTTCCTCATACTTTACATCTTCTCGCACAGTCCTTCGCAGTCAGATTTGGCGCAGTTTCACGGATTCAAGCATCCTTCACAA
CAATTAGCAGAAATCAAAGCCGATGGAGACGAACTTATTCTTCCCAAGAAAGGCAACATTCTAGCGATTCAAAGTTTCCGTAACCTAAAAGAGATTGAAAAATCATACTC
TCTTAAATCTCGCCCTCCGCGGAAACTCGCCGATTTCTAA
mRNA sequenceShow/hide mRNA sequence
GGGAAATGGAAAAGTAAGATTAAAAAGTAATGAGGGGTGAACTAAGGCTTTGGCTTTCAGTGAGCAAACATTGCTTCTCTCTCTCTACTTCTCTCTCTCTACCATGCAAA
GGCAATCTCTAGGTTCACCAGTTTCCAAGCTCCACGGCCATGGCGCCGGAGCAAAGTCCGATGAGGATCCGGCCGACGATCAAAAGCGCAAGAAGCACTCTCCATCTTCT
TCCTCAATTCTCAACTACGGCGGACAAGACGACGATAAATCCTCTAAATCTTTCCGATTCTCATTTCCCTCGCCTTCTCCTCCGCGCCAAGAGAAGTTAGTTCACGCCAT
ACCTATTCTCACCATTATCTGCTTCCTCATACTTTACATCTTCTCGCACAGTCCTTCGCAGTCAGATTTGGCGCAGTTTCACGGATTCAAGCATCCTTCACAACAATTAG
CAGAAATCAAAGCCGATGGAGACGAACTTATTCTTCCCAAGAAAGGCAACATTCTAGCGATTCAAAGTTTCCGTAACCTAAAAGAGATTGAAAAATCATACTCTCTTAAA
TCTCGCCCTCCGCGGAAACTCGCCGATTTCTAAACTCTCTGCATTTCCATTTATCTGACCTTCCGGTAAACTCTCACGAACTTCGTTTCCGCCGTGCGGATTCACTCACC
GGCGCGTGTGCATCCATAACTTTTTTCTTTCCAACGCCTCCTGTACATCAAATAATCCGTCAGATCATTAAATTGTTTTTTATTTATTTTTTCTTTCGCTTTTACTATTT
TTTTGTTCGCCTCTGCATACGCCGGCGGCGCTTATGTAACATCCGACGAGATACTCTCAATTTAATCTAAACAAAGAATGAACATAATTATCAGCATTAGATCAGTGAGC
AGAATCACTAATCAACGCGCTATATTTTCGGCGGATGTGGAGCGCGTGAAGGCCGGCACCGGCGCGGCGGAGATGGAAATGGAATCCAGCTGGAATATATATTTATCACA
TCATTTATTTTTCGACTTTCCGAATCGGACCGTTACGGCATTGGGAGAAGGACCTCAAGATGCCAGCTGGAAAAAAAATGAAAGAGTCGCTGACGGTATCAGGTTCTTTC
TTTCTTGTATATTTATTCTTAGGCCCTCCATCTATTGCCTATTTATTTTCATTTAATTTACTTCTTCTTGGCCTCTCTCATGTCAAAGTATATTAGGAC
Protein sequenceShow/hide protein sequence
MQRQSLGSPVSKLHGHGAGAKSDEDPADDQKRKKHSPSSSSILNYGGQDDDKSSKSFRFSFPSPSPPRQEKLVHAIPILTIICFLILYIFSHSPSQSDLAQFHGFKHPSQ
QLAEIKADGDELILPKKGNILAIQSFRNLKEIEKSYSLKSRPPRKLADF