CuGenDBv2

Gene ID	CSPI03G46490
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	protein SAMBA-like isoform X1
Genome location	Chr3:39732947..39734983
RNA-Seq Expression	CSPI03G46490
Synteny	CSPI03G46490
Gene Ontology terms	GO:0046621 - negative regulation of organ growth (biological process) GO:0010997 - anaphase-promoting complex binding (molecular function) GO:0016874 - ligase activity (molecular function)
InterPro domains	IPR037547 - Protein SAMBA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0038559.1 uncharacterized protein E6C27_scaffold92G00870 [Cucumis melo var. makuwa]

1.1e-49

70.91

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Query:  MNTPSPANSSVSTTSVAGRCSTNAALSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQDTISIVCPLNSYHV
        MNTPSPANSS STT+VAGRCSTNAALSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQ              
Subjt:  MNTPSPANSSVSTTSVAGRCSTNAALSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQDTISIVCPLNSYHV

Query:  FVYGYVLQGCAYLTKRLTIISCFEVVALAVCEDFILKWCFPQKDRREKKVMDQIDENDLHLGEIL
               Q   YLT    I+              IL W FPQKD REKKVMDQIDENDLHLGEIL
Subjt:  FVYGYVLQGCAYLTKRLTIISCFEVVALAVCEDFILKWCFPQKDRREKKVMDQIDENDLHLGEIL

XP_004136197.1 protein SAMBA isoform X1 [Cucumis sativus]

1.2e-37

98.84

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Query:  MNTPSPANSSVSTTSVAGRCSTNAALSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQ
        MNTPSPANSSVSTT+VAGRCSTNAALSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQ
Subjt:  MNTPSPANSSVSTTSVAGRCSTNAALSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQ

XP_004136198.1 protein SAMBA isoform X2 [Cucumis sativus]

1.2e-37

98.84

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Query:  MNTPSPANSSVSTTSVAGRCSTNAALSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQ
        MNTPSPANSSVSTT+VAGRCSTNAALSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQ
Subjt:  MNTPSPANSSVSTTSVAGRCSTNAALSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQ

XP_008466003.1 PREDICTED: uncharacterized protein LOC103503566 isoform X2 [Cucumis melo]

3.6e-37

97.67

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Query:  MNTPSPANSSVSTTSVAGRCSTNAALSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQ
        MNTPSPANSS STT+VAGRCSTNAALSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQ
Subjt:  MNTPSPANSSVSTTSVAGRCSTNAALSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQ

XP_022149249.1 protein SAMBA-like isoform X1 [Momordica charantia]

1.9e-38

57.32

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Query:  MNTPSPANSSVSTTSVAGRCSTNAALSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQDTISIVCPLNSYHV
        MN+ SPANSS+STT+VAGRCSTNAA+S+DDFRFP+NLIS+PERKDE M+ALKSNIMAALNKEVKSLDDDNWMFEGPRS INLMSRQ  +           
Subjt:  MNTPSPANSSVSTTSVAGRCSTNAALSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQDTISIVCPLNSYHV

Query:  FVYGYVLQGCAYLTKRLTIISCFEVVALAVCEDFILKWCFPQKDRREKKVMDQIDEN
                                     +   F ++W FPQKDRRE+K+M +ID N
Subjt:  FVYGYVLQGCAYLTKRLTIISCFEVVALAVCEDFILKWCFPQKDRREKKVMDQIDEN

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LK11 Uncharacterized protein

6.0e-38

98.84

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Query:  MNTPSPANSSVSTTSVAGRCSTNAALSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQ
        MNTPSPANSSVSTT+VAGRCSTNAALSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQ
Subjt:  MNTPSPANSSVSTTSVAGRCSTNAALSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQ

A0A1S3CQ76 uncharacterized protein LOC103503566 isoform X2

1.7e-37

97.67

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Query:  MNTPSPANSSVSTTSVAGRCSTNAALSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQ
        MNTPSPANSS STT+VAGRCSTNAALSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQ
Subjt:  MNTPSPANSSVSTTSVAGRCSTNAALSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQ

A0A1S3CQ80 uncharacterized protein LOC103503566 isoform X1

1.7e-37

97.67

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Query:  MNTPSPANSSVSTTSVAGRCSTNAALSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQ
        MNTPSPANSS STT+VAGRCSTNAALSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQ
Subjt:  MNTPSPANSSVSTTSVAGRCSTNAALSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQ

A0A5A7TB46 Uncharacterized protein

5.2e-50

70.91

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Query:  MNTPSPANSSVSTTSVAGRCSTNAALSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQDTISIVCPLNSYHV
        MNTPSPANSS STT+VAGRCSTNAALSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQ              
Subjt:  MNTPSPANSSVSTTSVAGRCSTNAALSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQDTISIVCPLNSYHV

Query:  FVYGYVLQGCAYLTKRLTIISCFEVVALAVCEDFILKWCFPQKDRREKKVMDQIDENDLHLGEIL
               Q   YLT    I+              IL W FPQKD REKKVMDQIDENDLHLGEIL
Subjt:  FVYGYVLQGCAYLTKRLTIISCFEVVALAVCEDFILKWCFPQKDRREKKVMDQIDENDLHLGEIL

A0A6J1D582 protein SAMBA-like isoform X1

9.2e-39

57.32

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Query:  MNTPSPANSSVSTTSVAGRCSTNAALSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQDTISIVCPLNSYHV
        MN+ SPANSS+STT+VAGRCSTNAA+S+DDFRFP+NLIS+PERKDE M+ALKSNIMAALNKEVKSLDDDNWMFEGPRS INLMSRQ  +           
Subjt:  MNTPSPANSSVSTTSVAGRCSTNAALSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQDTISIVCPLNSYHV

Query:  FVYGYVLQGCAYLTKRLTIISCFEVVALAVCEDFILKWCFPQKDRREKKVMDQIDEN
                                     +   F ++W FPQKDRRE+K+M +ID N
Subjt:  FVYGYVLQGCAYLTKRLTIISCFEVVALAVCEDFILKWCFPQKDRREKKVMDQIDEN

SwissProt top hits

e value

%identity

Alignment

Q9C613 Protein SAMBA

1.1e-20

62.07

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Query:  MNTPSPANSSVSTTSVA-GRCSTNAALSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQ
        MN  SPA+S VSTT+VA G  S+ AA  LDDF FP ++ S+ ERKDEAM  LK+++M  L+KEVKSL++D+WMFEGPRSRI+L+SR+
Subjt:  MNTPSPANSSVSTTSVA-GRCSTNAALSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQ

Arabidopsis top hits

e value

%identity

Alignment

AT1G32310.1 unknown protein

7.7e-22

62.07

Show/hide

Query:  MNTPSPANSSVSTTSVA-GRCSTNAALSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQ
        MN  SPA+S VSTT+VA G  S+ AA  LDDF FP ++ S+ ERKDEAM  LK+++M  L+KEVKSL++D+WMFEGPRSRI+L+SR+
Subjt:  MNTPSPANSSVSTTSVA-GRCSTNAALSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQ

Sequences

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CDS sequence

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ATGAATACCCCGTCCCCCGCCAATTCTTCCGTTTCCACCACGTCGGTTGCCGGAAGGTGTAGCACTAACGCCGCATTGTCGCTTGACGATTTTCGCTTTCCCTCCAATTT
AATTTCCGTGCCAGAGCGCAAGGACGAGGCCATGACCGCTCTTAAATCTAATATAATGGCTGCACTGAATAAGGAGGTCAAATCCCTAGATGATGATAACTGGATGTTTG
AAGGTCCTCGCTCCCGTATCAACCTTATGTCACGACAAGACACGATAAGCATAGTCTGTCCTTTGAATTCATATCATGTATTTGTCTATGGATATGTGTTGCAAGGTTGT
GCATATCTTACAAAAAGGTTAACAATAATTTCATGTTTTGAAGTAGTTGCACTTGCAGTATGTGAAGACTTCATCTTGAAGTGGTGCTTTCCTCAAAAAGACAGAAGAGA
AAAGAAGGTAATGGATCAGATTGATGAGAATGATCTTCATCTTGGAGAAATCTTGTGA

mRNA sequence

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Protein sequence

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MNTPSPANSSVSTTSVAGRCSTNAALSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQDTISIVCPLNSYHVFVYGYVLQGC
AYLTKRLTIISCFEVVALAVCEDFILKWCFPQKDRREKKVMDQIDENDLHLGEIL

CSPI03G46490 (gene) of Cucumber (PI 183967) v1 genome