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CSPI03G46660 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI03G46660
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionKeratin, type I cytoskeletal 9-like
Genome locationChr3:39846377..39846739
RNA-Seq ExpressionCSPI03G46660
SyntenyCSPI03G46660
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038572.1 keratin, type I cytoskeletal 9-like [Cucumis melo var. makuwa]1.2e-0543.18Show/hide
Query:  MASLKLS-SLMFFIL-CIEISKAARVLTTFGGGGVQYGNPRSLGDSRYGNFKVN---GYAK--YNNDYYWG----------WIGGQGSSSYGDDYDSHRS
        MAS +LS SL+FFIL  IEIS  A         G +YGNP + G  +YG    N   GYA+  YNNDYYWG          + G   S    ++YD H S
Subjt:  MASLKLS-SLMFFIL-CIEISKAARVLTTFGGGGVQYGNPRSLGDSRYGNFKVN---GYAK--YNNDYYWG----------WIGGQGSSSYGDDYDSHRS

Query:  SCKS---GGGYK-----YANYGGGNIGDNSSE
        SCKS   G GYK       NYG  N G N+ E
Subjt:  SCKS---GGGYK-----YANYGGGNIGDNSSE
TrEMBL top hitse value%identityAlignment
A0A0A0LK39 Uncharacterized protein1.8e-60100Show/hide
Query:  MASLKLSSLMFFILCIEISKAARVLTTFGGGGVQYGNPRSLGDSRYGNFKVNGYAKYNNDYYWGWIGGQGSSSYGDDYDSHRSSCKSGGGYKYANYGGGN
        MASLKLSSLMFFILCIEISKAARVLTTFGGGGVQYGNPRSLGDSRYGNFKVNGYAKYNNDYYWGWIGGQGSSSYGDDYDSHRSSCKSGGGYKYANYGGGN
Subjt:  MASLKLSSLMFFILCIEISKAARVLTTFGGGGVQYGNPRSLGDSRYGNFKVNGYAKYNNDYYWGWIGGQGSSSYGDDYDSHRSSCKSGGGYKYANYGGGN

Query:  IGDNSSEGSSVYIISKETKP
        IGDNSSEGSSVYIISKETKP
Subjt:  IGDNSSEGSSVYIISKETKP
A0A5A7T532 Keratin, type I cytoskeletal 9-like5.7e-0643.18Show/hide
Query:  MASLKLS-SLMFFIL-CIEISKAARVLTTFGGGGVQYGNPRSLGDSRYGNFKVN---GYAK--YNNDYYWG----------WIGGQGSSSYGDDYDSHRS
        MAS +LS SL+FFIL  IEIS  A         G +YGNP + G  +YG    N   GYA+  YNNDYYWG          + G   S    ++YD H S
Subjt:  MASLKLS-SLMFFIL-CIEISKAARVLTTFGGGGVQYGNPRSLGDSRYGNFKVN---GYAK--YNNDYYWG----------WIGGQGSSSYGDDYDSHRS

Query:  SCKS---GGGYK-----YANYGGGNIGDNSSE
        SCKS   G GYK       NYG  N G N+ E
Subjt:  SCKS---GGGYK-----YANYGGGNIGDNSSE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTCTCAAACTTTCTTCTCTTATGTTCTTCATTTTATGTATTGAGATTTCTAAGGCAGCCAGAGTTCTAACAACTTTTGGTGGTGGTGGAGTACAATATGGTAA
TCCAAGAAGCCTTGGTGATAGTAGGTATGGTAATTTTAAAGTTAATGGGTATGCAAAATATAATAATGATTATTACTGGGGTTGGATTGGTGGTCAAGGAAGTAGTAGTT
ATGGAGATGATTATGATAGTCATAGAAGCAGTTGCAAAAGTGGAGGAGGATACAAATATGCTAACTATGGAGGTGGAAACATAGGTGACAACTCATCCGAAGGAAGCAGT
GTATATATTATAAGTAAGGAGACTAAACCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCTCTCAAACTTTCTTCTCTTATGTTCTTCATTTTATGTATTGAGATTTCTAAGGCAGCCAGAGTTCTAACAACTTTTGGTGGTGGTGGAGTACAATATGGTAA
TCCAAGAAGCCTTGGTGATAGTAGGTATGGTAATTTTAAAGTTAATGGGTATGCAAAATATAATAATGATTATTACTGGGGTTGGATTGGTGGTCAAGGAAGTAGTAGTT
ATGGAGATGATTATGATAGTCATAGAAGCAGTTGCAAAAGTGGAGGAGGATACAAATATGCTAACTATGGAGGTGGAAACATAGGTGACAACTCATCCGAAGGAAGCAGT
GTATATATTATAAGTAAGGAGACTAAACCCTAA
Protein sequenceShow/hide protein sequence
MASLKLSSLMFFILCIEISKAARVLTTFGGGGVQYGNPRSLGDSRYGNFKVNGYAKYNNDYYWGWIGGQGSSSYGDDYDSHRSSCKSGGGYKYANYGGGNIGDNSSEGSS
VYIISKETKP