CuGenDBv2

Gene ID	CSPI03G47420
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	IIIB transcription factor
Genome location	Chr3:40471979..40475234
RNA-Seq Expression	CSPI03G47420
Synteny	CSPI03G47420
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004148363.1 uncharacterized protein LOC101210706 [Cucumis sativus]

3.0e-70

99.34

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Query:  MDKLLQFGRRALFYVRVLSGYEERRIRSLRFDLDKRLKQAEERKSAIRKLPEQTILGEVRRMVEEMQNLNKKLEETETAIEEYFKPIDKEAETLMKIQLE
        MDKLLQFGRRALFYVRVLSGYEERRIRSLRFDLDKRLKQAEERKSAIRKLPEQTILGEVRRMVEEMQNLNKKLEETETAIEEYFKPIDKEAETLMKIQLE
Subjt:  MDKLLQFGRRALFYVRVLSGYEERRIRSLRFDLDKRLKQAEERKSAIRKLPEQTILGEVRRMVEEMQNLNKKLEETETAIEEYFKPIDKEAETLMKIQLE

Query:  GEERNMRDMVKVMQQQALLEKVEAGKVTSRNLQTEKNQQTQNLASDTTPQKT
        GEERNMRDMVKVMQQQALLEK EAGKVTSRNLQTEKNQQTQNLASDTTPQKT
Subjt:  GEERNMRDMVKVMQQQALLEKVEAGKVTSRNLQTEKNQQTQNLASDTTPQKT

XP_008465889.1 PREDICTED: uncharacterized protein LOC103503473 [Cucumis melo]

2.4e-59

86.84

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Query:  MDKLLQFGRRALFYVRVLSGYEERRIRSLRFDLDKRLKQAEERKSAIRKLPEQTILGEVRRMVEEMQNLNKKLEETETAIEEYFKPIDKEAETLMKIQLE
        MDKLLQFGRRALFY+RVLSGYEERRIRS R  LDKRLKQAEERK+AIRK+PEQ ILGEVRRMVEEMQ LNK LEETE+AIEEYFKPIDKEAE LMKIQLE
Subjt:  MDKLLQFGRRALFYVRVLSGYEERRIRSLRFDLDKRLKQAEERKSAIRKLPEQTILGEVRRMVEEMQNLNKKLEETETAIEEYFKPIDKEAETLMKIQLE

Query:  GEERNMRDMVKVMQQQALLEKVEAGKVTSRNLQTEKNQQTQNLASDTTPQKT
        GEER+M+DMVKVMQQQAL ++ EAGKVT+  LQTEKNQQTQNLASDTTPQKT
Subjt:  GEERNMRDMVKVMQQQALLEKVEAGKVTSRNLQTEKNQQTQNLASDTTPQKT

XP_022131261.1 uncharacterized protein LOC111004517 [Momordica charantia]

2.0e-58

83.55

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Query:  MDKLLQFGRRALFYVRVLSGYEERRIRSLRFDLDKRLKQAEERKSAIRKLPEQTILGEVRRMVEEMQNLNKKLEETETAIEEYFKPIDKEAETLMKIQLE
        MDKLL+FGRRALFYVRVLSGYEERRIRS R +L+KRLKQAEE+K+A+RK+PEQ ILGEVRRMVEEMQ LNKKLEETE+AIEEYFKPIDKEAE LMK+QLE
Subjt:  MDKLLQFGRRALFYVRVLSGYEERRIRSLRFDLDKRLKQAEERKSAIRKLPEQTILGEVRRMVEEMQNLNKKLEETETAIEEYFKPIDKEAETLMKIQLE

Query:  GEERNMRDMVKVMQQQALLEKVEAGKVTSRNLQTEKNQQTQNLASDTTPQKT
        GEER M+DMVKVMQQQAL EK EAGKVT+  LQT+KNQ  QNLASD TPQKT
Subjt:  GEERNMRDMVKVMQQQALLEKVEAGKVTSRNLQTEKNQQTQNLASDTTPQKT

XP_022996261.1 uncharacterized protein LOC111491540 [Cucurbita maxima]

5.8e-50

80.28

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Query:  MDKLLQFGRRALFYVRVLSGYEERRIRSLRFDLDKRLKQAEERKSAIRKLPEQTILGEVRRMVEEMQNLNKKLEETETAIEEYFKPIDKEAETLMKIQLE
        MDK+L+ GRRALFYV+VLSGYEERRIRS R +L+KRLK+AEERK+AIRK+PEQ ILGEVRRMVEEMQ LNKKLEETE+AIEEYFKPIDKE ETLM++QLE
Subjt:  MDKLLQFGRRALFYVRVLSGYEERRIRSLRFDLDKRLKQAEERKSAIRKLPEQTILGEVRRMVEEMQNLNKKLEETETAIEEYFKPIDKEAETLMKIQLE

Query:  GEERNMRDMVKVMQQQALLEKVEAGKVTSRNLQTEKNQQTQN
        GEER M++MVKVMQQQALLEK EA KV S  LQT+KNQQ Q+
Subjt:  GEERNMRDMVKVMQQQALLEKVEAGKVTSRNLQTEKNQQTQN

XP_038886906.1 uncharacterized protein LOC120077104 [Benincasa hispida]

1.6e-60

88.16

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Query:  MDKLLQFGRRALFYVRVLSGYEERRIRSLRFDLDKRLKQAEERKSAIRKLPEQTILGEVRRMVEEMQNLNKKLEETETAIEEYFKPIDKEAETLMKIQLE
        MDKLL+FGRRALFYVRVLSGYEERRIRS R +L+KRLKQAEERK+AIRK+PEQ ILGEVRRMVEEMQ LNKKLEETE+AIEEYFKPIDKEAE LMKIQLE
Subjt:  MDKLLQFGRRALFYVRVLSGYEERRIRSLRFDLDKRLKQAEERKSAIRKLPEQTILGEVRRMVEEMQNLNKKLEETETAIEEYFKPIDKEAETLMKIQLE

Query:  GEERNMRDMVKVMQQQALLEKVEAGKVTSRNLQTEKNQQTQNLASDTTPQKT
        GEER M+DMVKVMQQQAL EK EAGKVTS  LQT+KNQQTQNLASDTTPQKT
Subjt:  GEERNMRDMVKVMQQQALLEKVEAGKVTSRNLQTEKNQQTQNLASDTTPQKT

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LKE0 Uncharacterized protein

1.4e-70

99.34

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Query:  MDKLLQFGRRALFYVRVLSGYEERRIRSLRFDLDKRLKQAEERKSAIRKLPEQTILGEVRRMVEEMQNLNKKLEETETAIEEYFKPIDKEAETLMKIQLE
        MDKLLQFGRRALFYVRVLSGYEERRIRSLRFDLDKRLKQAEERKSAIRKLPEQTILGEVRRMVEEMQNLNKKLEETETAIEEYFKPIDKEAETLMKIQLE
Subjt:  MDKLLQFGRRALFYVRVLSGYEERRIRSLRFDLDKRLKQAEERKSAIRKLPEQTILGEVRRMVEEMQNLNKKLEETETAIEEYFKPIDKEAETLMKIQLE

Query:  GEERNMRDMVKVMQQQALLEKVEAGKVTSRNLQTEKNQQTQNLASDTTPQKT
        GEERNMRDMVKVMQQQALLEK EAGKVTSRNLQTEKNQQTQNLASDTTPQKT
Subjt:  GEERNMRDMVKVMQQQALLEKVEAGKVTSRNLQTEKNQQTQNLASDTTPQKT

A0A1S3CPZ1 uncharacterized protein LOC103503473

1.1e-59

86.84

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Query:  MDKLLQFGRRALFYVRVLSGYEERRIRSLRFDLDKRLKQAEERKSAIRKLPEQTILGEVRRMVEEMQNLNKKLEETETAIEEYFKPIDKEAETLMKIQLE
        MDKLLQFGRRALFY+RVLSGYEERRIRS R  LDKRLKQAEERK+AIRK+PEQ ILGEVRRMVEEMQ LNK LEETE+AIEEYFKPIDKEAE LMKIQLE
Subjt:  MDKLLQFGRRALFYVRVLSGYEERRIRSLRFDLDKRLKQAEERKSAIRKLPEQTILGEVRRMVEEMQNLNKKLEETETAIEEYFKPIDKEAETLMKIQLE

Query:  GEERNMRDMVKVMQQQALLEKVEAGKVTSRNLQTEKNQQTQNLASDTTPQKT
        GEER+M+DMVKVMQQQAL ++ EAGKVT+  LQTEKNQQTQNLASDTTPQKT
Subjt:  GEERNMRDMVKVMQQQALLEKVEAGKVTSRNLQTEKNQQTQNLASDTTPQKT

A0A6J1BQI2 uncharacterized protein LOC111004517

9.6e-59

83.55

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Query:  MDKLLQFGRRALFYVRVLSGYEERRIRSLRFDLDKRLKQAEERKSAIRKLPEQTILGEVRRMVEEMQNLNKKLEETETAIEEYFKPIDKEAETLMKIQLE
        MDKLL+FGRRALFYVRVLSGYEERRIRS R +L+KRLKQAEE+K+A+RK+PEQ ILGEVRRMVEEMQ LNKKLEETE+AIEEYFKPIDKEAE LMK+QLE
Subjt:  MDKLLQFGRRALFYVRVLSGYEERRIRSLRFDLDKRLKQAEERKSAIRKLPEQTILGEVRRMVEEMQNLNKKLEETETAIEEYFKPIDKEAETLMKIQLE

Query:  GEERNMRDMVKVMQQQALLEKVEAGKVTSRNLQTEKNQQTQNLASDTTPQKT
        GEER M+DMVKVMQQQAL EK EAGKVT+  LQT+KNQ  QNLASD TPQKT
Subjt:  GEERNMRDMVKVMQQQALLEKVEAGKVTSRNLQTEKNQQTQNLASDTTPQKT

A0A6J1H1D7 uncharacterized protein LOC111459545

6.3e-50

79.58

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Query:  MDKLLQFGRRALFYVRVLSGYEERRIRSLRFDLDKRLKQAEERKSAIRKLPEQTILGEVRRMVEEMQNLNKKLEETETAIEEYFKPIDKEAETLMKIQLE
        MDK+L+FGRRALFYV+VLSGYEERRIRSLR +L+KRLK+AEERK+AIR++PEQ ILGEVRRMVEEMQ LNKKLEETE+AIEEYFKPIDKE E LM++QLE
Subjt:  MDKLLQFGRRALFYVRVLSGYEERRIRSLRFDLDKRLKQAEERKSAIRKLPEQTILGEVRRMVEEMQNLNKKLEETETAIEEYFKPIDKEAETLMKIQLE

Query:  GEERNMRDMVKVMQQQALLEKVEAGKVTSRNLQTEKNQQTQN
        GEER M++MVKV+QQQALLEK EA KV S  LQT+KNQQ Q+
Subjt:  GEERNMRDMVKVMQQQALLEKVEAGKVTSRNLQTEKNQQTQN

A0A6J1K1F5 uncharacterized protein LOC111491540

2.8e-50

80.28

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Query:  MDKLLQFGRRALFYVRVLSGYEERRIRSLRFDLDKRLKQAEERKSAIRKLPEQTILGEVRRMVEEMQNLNKKLEETETAIEEYFKPIDKEAETLMKIQLE
        MDK+L+ GRRALFYV+VLSGYEERRIRS R +L+KRLK+AEERK+AIRK+PEQ ILGEVRRMVEEMQ LNKKLEETE+AIEEYFKPIDKE ETLM++QLE
Subjt:  MDKLLQFGRRALFYVRVLSGYEERRIRSLRFDLDKRLKQAEERKSAIRKLPEQTILGEVRRMVEEMQNLNKKLEETETAIEEYFKPIDKEAETLMKIQLE

Query:  GEERNMRDMVKVMQQQALLEKVEAGKVTSRNLQTEKNQQTQN
        GEER M++MVKVMQQQALLEK EA KV S  LQT+KNQQ Q+
Subjt:  GEERNMRDMVKVMQQQALLEKVEAGKVTSRNLQTEKNQQTQN

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G17010.1 unknown protein

1.3e-36

53.75

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Query:  MDKLLQFGRRALFYVRVLSGYEERRIRSLRFDLDKRLKQAEERKSAIRKLPEQTILGEVRRMVEEMQNLNKKLEETETAIEEYFKPIDKEAETLMKIQLE
        M+KLL++GR+A+FYVRVLSGYEERRIRS R  L+KR++QA +RK  I +LPEQ +L EVRRMVEEMQNLNK++E TE  IE+YFKPIDK A T+M+IQLE
Subjt:  MDKLLQFGRRALFYVRVLSGYEERRIRSLRFDLDKRLKQAEERKSAIRKLPEQTILGEVRRMVEEMQNLNKKLEETETAIEEYFKPIDKEAETLMKIQLE

Query:  GEERNMRDMVKVMQQQALLEKVEAGKVT----SRNLQTEKN-----QQTQNLASDTTPQK
        GE++ M  M+   QQ+A+ +  EA K+     + N+ T+ N     Q +++ A++ +  K
Subjt:  GEERNMRDMVKVMQQQALLEKVEAGKVT----SRNLQTEKN-----QQTQNLASDTTPQK

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGACAAGCTTTTGCAGTTTGGACGAAGAGCCCTCTTCTACGTTAGGGTCCTCTCTGGCTATGAAGAGCGGCGGATTCGATCGCTAAGGTTTGACCTTGATAAGCGTCT
CAAACAGGCGGAGGAAAGAAAATCTGCCATAAGAAAGTTGCCAGAACAGACTATCTTAGGTGAAGTTCGTCGTATGGTTGAGGAGATGCAAAATCTAAATAAAAAGTTAG
AGGAAACAGAAACTGCCATTGAAGAATACTTCAAGCCAATTGACAAAGAAGCAGAGACATTGATGAAAATACAACTTGAAGGAGAAGAGAGAAATATGAGGGACATGGTT
AAAGTTATGCAGCAACAGGCTTTACTTGAAAAAGTTGAGGCAGGTAAGGTTACAAGTCGTAATCTTCAAACTGAAAAAAATCAACAAACTCAAAACCTTGCATCTGACAC
AACCCCTCAAAAAACTTAG

mRNA sequence

Show/hide mRNA sequence

AGTAAATCTCTCACGAGAAGGGGGAAAACACACACAGCCTCTCCGCAGTACTTCGTTCTTTCCAAATTGATTAATGACTTCTTCTGGGAGATCAGCTTGAGGGATTTGGA
TGGACAAGCTTTTGCAGTTTGGACGAAGAGCCCTCTTCTACGTTAGGGTCCTCTCTGGCTATGAAGAGCGGCGGATTCGATCGCTAAGGTTTGACCTTGATAAGCGTCTC
AAACAGGCGGAGGAAAGAAAATCTGCCATAAGAAAGTTGCCAGAACAGACTATCTTAGGTGAAGTTCGTCGTATGGTTGAGGAGATGCAAAATCTAAATAAAAAGTTAGA
GGAAACAGAAACTGCCATTGAAGAATACTTCAAGCCAATTGACAAAGAAGCAGAGACATTGATGAAAATACAACTTGAAGGAGAAGAGAGAAATATGAGGGACATGGTTA
AAGTTATGCAGCAACAGGCTTTACTTGAAAAAGTTGAGGCAGGTAAGGTTACAAGTCGTAATCTTCAAACTGAAAAAAATCAACAAACTCAAAACCTTGCATCTGACACA
ACCCCTCAAAAAACTTAGCTGAGGTAATAATAGTTCTACGAGAAGTTAGTGATGATTTGATTAGATTAATAAGTCTGTTACTGTGCAATTTTGTTGCCACCATTTGTCTT
AAAACTACACCTCTCAAGAGTTGTTGTGATTATAAAGCCCCTTAGATTTACTTACAGAGGCATTATTCATTACTTCTAGTTTATTATATGAATAGTTTTTCTTACCCAAT
TCAGATGTATGGATTTGTGATTGCCAACCTCAAGTTTGAAACTGAGTTTTGGCACTCCGACCGAAACCGGTTACCAATTACACCCTTGGTTAAATTGATCGAATAAGTTT
CATTTTTCAA

Protein sequence

Show/hide protein sequence

MDKLLQFGRRALFYVRVLSGYEERRIRSLRFDLDKRLKQAEERKSAIRKLPEQTILGEVRRMVEEMQNLNKKLEETETAIEEYFKPIDKEAETLMKIQLEGEERNMRDMV
KVMQQQALLEKVEAGKVTSRNLQTEKNQQTQNLASDTTPQKT

CSPI03G47420 (gene) of Cucumber (PI 183967) v1 genome