; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI04G00230 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G00230
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionDNA-repair protein, UmuC-like protein
Genome locationChr4:164141..165506
RNA-Seq ExpressionCSPI04G00230
SyntenyCSPI04G00230
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN52753.1 hypothetical protein Csa_015419 [Cucumis sativus]9.9e-120100Show/hide
Query:  MELFTITIPRIPHKNSPIHRTLTKIHASSSSKSPNSQLPLPSKFGRQNENNIPTMAEIVAAGEAQNLSLRLQTLGPFFRITAKSLGTEREIGKAEGLVRV
        MELFTITIPRIPHKNSPIHRTLTKIHASSSSKSPNSQLPLPSKFGRQNENNIPTMAEIVAAGEAQNLSLRLQTLGPFFRITAKSLGTEREIGKAEGLVRV
Subjt:  MELFTITIPRIPHKNSPIHRTLTKIHASSSSKSPNSQLPLPSKFGRQNENNIPTMAEIVAAGEAQNLSLRLQTLGPFFRITAKSLGTEREIGKAEGLVRV

Query:  WLGGKILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKSMYEVSGSKLKDIGDMLVWGGIGTRMD
        WLGGKILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKSMYEVSGSKLKDIGDMLVWGGIGTRMD
Subjt:  WLGGKILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKSMYEVSGSKLKDIGDMLVWGGIGTRMD

Query:  APIDSLLLKWCTRFKPH
        APIDSLLLKWCTRFKPH
Subjt:  APIDSLLLKWCTRFKPH

XP_008454398.1 PREDICTED: uncharacterized protein LOC103494815 [Cucumis melo]1.2e-10994.06Show/hide
Query:  MELFTITIPRIPHKNSPIHRTLTKIHASSSSKSPNSQLPLPSK----FGRQNENNIPTMAEIVAAGEAQNLSLRLQTLGPFFRITAKSLGTEREIGKAEG
        MELFTITIPRIPHK SPIHRTLTKIHASSSSK PNSQLPLPSK       QNENNIPTMAEIVAAGE+QNLSLRLQTLGPFFRITAKSL TEREIGKAEG
Subjt:  MELFTITIPRIPHKNSPIHRTLTKIHASSSSKSPNSQLPLPSK----FGRQNENNIPTMAEIVAAGEAQNLSLRLQTLGPFFRITAKSLGTEREIGKAEG

Query:  LVRVWLGGKILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKSMYEVSGSKLKDIGDMLVWGGIG
        LVRVWLGGKILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKSMYEVSGSKLKDIGDM+VWGGIG
Subjt:  LVRVWLGGKILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKSMYEVSGSKLKDIGDMLVWGGIG

Query:  TRMDAPIDSLLLKWCTRFK
        TRMDAPI+SLLLKWCTRFK
Subjt:  TRMDAPIDSLLLKWCTRFK

XP_022922749.1 uncharacterized protein LOC111430648 [Cucurbita moschata]4.6e-9380.8Show/hide
Query:  MELFTITIPRIPHKNSPIHRTLTKIH--ASSSSKSPNSQLPLPSKFGRQNENNI-------PTMAEIVAAGEAQNLSLRLQTLGPFFRITAKSLGTEREI
        MEL T+ IPRIP    PIHR LTK H  +SSSSKSPN QLPLPSK  +  +  I       PTMAEIVAAGEAQN+SLRLQTLGPFFRITAKSL ++REI
Subjt:  MELFTITIPRIPHKNSPIHRTLTKIH--ASSSSKSPNSQLPLPSKFGRQNENNI-------PTMAEIVAAGEAQNLSLRLQTLGPFFRITAKSLGTEREI

Query:  GKAEGLVRVWLGGKILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKSMYEVSGSKLKDIGDMLV
        GKAEGL+RVWL G+ILHLDSIRL RESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKS+YEVSGSK+ DIGDMLV
Subjt:  GKAEGLVRVWLGGKILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKSMYEVSGSKLKDIGDMLV

Query:  WGGIGTRMDAPIDSLLLKWCTRFK
        WGG+GTRMDAPI++LLLKWC+RFK
Subjt:  WGGIGTRMDAPIDSLLLKWCTRFK

XP_023521663.1 uncharacterized protein LOC111785501 [Cucurbita pepo subsp. pepo]1.3e-9279.91Show/hide
Query:  MELFTITIPRIPHKNSPIHRTLTKIH--ASSSSKSPNSQLPLPSKFGRQNE-------NNIPTMAEIVAAGEAQNLSLRLQTLGPFFRITAKSLGTEREI
        MEL T+ IPRIP   SPIHR LTK H  +SSSSKSPN QLPLPSK  +  +          PTMAEI+AAGEAQN+SLRLQTLGPFFRITAKSL ++REI
Subjt:  MELFTITIPRIPHKNSPIHRTLTKIH--ASSSSKSPNSQLPLPSKFGRQNE-------NNIPTMAEIVAAGEAQNLSLRLQTLGPFFRITAKSLGTEREI

Query:  GKAEGLVRVWLGGKILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKSMYEVSGSKLKDIGDMLV
        GKAEGL+RVWL G+ILHLDSIRL RESLGMEKSIFGLGLFIGAVAIRYGYDCGC+TAELLAINDSDLYHSKLVRFYTRIGFKS+YEVSGSK+ DIGDMLV
Subjt:  GKAEGLVRVWLGGKILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKSMYEVSGSKLKDIGDMLV

Query:  WGGIGTRMDAPIDSLLLKWCTRFK
        WGG+GTRMDAPI++LLLKWC+RFK
Subjt:  WGGIGTRMDAPIDSLLLKWCTRFK

XP_038903453.1 uncharacterized protein LOC120090038 [Benincasa hispida]2.7e-9385.51Show/hide
Query:  FTITIPRIPHKNSPIHRTLT-KIHASSSSKSPNSQLPLPSK-FGRQNENNIPTMAEIVAAGEAQNLSLRLQTLGPFFRITAKSLGTEREIGKAEGLVRVW
        FTI IPRIP   SPIHRTL  KIHA  SSK PNSQLPLPSK        NIPTM+EI+AAG+AQNL LRLQTLGPFFRITAKSL ++REIGKAEGLVRVW
Subjt:  FTITIPRIPHKNSPIHRTLT-KIHASSSSKSPNSQLPLPSK-FGRQNENNIPTMAEIVAAGEAQNLSLRLQTLGPFFRITAKSLGTEREIGKAEGLVRVW

Query:  LGGKILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKSMYEVSGSKLKDIGDMLVWGGIGTRMDA
        L GKILHL+SIRLNRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKSMYEVSG+KL DIGDMLVWGGIGTRMDA
Subjt:  LGGKILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKSMYEVSGSKLKDIGDMLVWGGIGTRMDA

Query:  PIDSLLLKWCTRFK
         I +LLLKWCTRFK
Subjt:  PIDSLLLKWCTRFK

TrEMBL top hitse value%identityAlignment
A0A0A0KT41 Uncharacterized protein4.8e-120100Show/hide
Query:  MELFTITIPRIPHKNSPIHRTLTKIHASSSSKSPNSQLPLPSKFGRQNENNIPTMAEIVAAGEAQNLSLRLQTLGPFFRITAKSLGTEREIGKAEGLVRV
        MELFTITIPRIPHKNSPIHRTLTKIHASSSSKSPNSQLPLPSKFGRQNENNIPTMAEIVAAGEAQNLSLRLQTLGPFFRITAKSLGTEREIGKAEGLVRV
Subjt:  MELFTITIPRIPHKNSPIHRTLTKIHASSSSKSPNSQLPLPSKFGRQNENNIPTMAEIVAAGEAQNLSLRLQTLGPFFRITAKSLGTEREIGKAEGLVRV

Query:  WLGGKILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKSMYEVSGSKLKDIGDMLVWGGIGTRMD
        WLGGKILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKSMYEVSGSKLKDIGDMLVWGGIGTRMD
Subjt:  WLGGKILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKSMYEVSGSKLKDIGDMLVWGGIGTRMD

Query:  APIDSLLLKWCTRFKPH
        APIDSLLLKWCTRFKPH
Subjt:  APIDSLLLKWCTRFKPH

A0A1S3BZR1 uncharacterized protein LOC1034948155.9e-11094.06Show/hide
Query:  MELFTITIPRIPHKNSPIHRTLTKIHASSSSKSPNSQLPLPSK----FGRQNENNIPTMAEIVAAGEAQNLSLRLQTLGPFFRITAKSLGTEREIGKAEG
        MELFTITIPRIPHK SPIHRTLTKIHASSSSK PNSQLPLPSK       QNENNIPTMAEIVAAGE+QNLSLRLQTLGPFFRITAKSL TEREIGKAEG
Subjt:  MELFTITIPRIPHKNSPIHRTLTKIHASSSSKSPNSQLPLPSK----FGRQNENNIPTMAEIVAAGEAQNLSLRLQTLGPFFRITAKSLGTEREIGKAEG

Query:  LVRVWLGGKILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKSMYEVSGSKLKDIGDMLVWGGIG
        LVRVWLGGKILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKSMYEVSGSKLKDIGDM+VWGGIG
Subjt:  LVRVWLGGKILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKSMYEVSGSKLKDIGDMLVWGGIG

Query:  TRMDAPIDSLLLKWCTRFK
        TRMDAPI+SLLLKWCTRFK
Subjt:  TRMDAPIDSLLLKWCTRFK

A0A6J1D616 uncharacterized protein LOC1110176373.2e-9281.57Show/hide
Query:  FTITIPRIPHKNSPIHRTLTKIHA--SSSSKSPNSQLPLPSKFG---RQNENNIPTMAEIVAAGEAQNLSLRLQTLGPFFRITAKSLGTEREIGKAEGLV
        FT TI RIP   SPI R L+KIHA  SSSSK PNSQLP PSK     +  E+NIPTM EI+AAG AQNL LRLQTLGPFFRITAKS  ++REIGKAEGL+
Subjt:  FTITIPRIPHKNSPIHRTLTKIHA--SSSSKSPNSQLPLPSKFG---RQNENNIPTMAEIVAAGEAQNLSLRLQTLGPFFRITAKSLGTEREIGKAEGLV

Query:  RVWLGGKILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKSMYEVSGSKLKDIGDMLVWGGIGTR
        RVW GG+ILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYG+DCGCKTAELLAINDSDLYHSKLVRFYTRIGFKSMYEVSGSK+ D GDMLVWGG+GTR
Subjt:  RVWLGGKILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKSMYEVSGSKLKDIGDMLVWGGIGTR

Query:  MDAPIDSLLLKWCTRFK
        MDA I+ LLLKWCTRFK
Subjt:  MDAPIDSLLLKWCTRFK

A0A6J1E4B2 uncharacterized protein LOC1114306482.2e-9380.8Show/hide
Query:  MELFTITIPRIPHKNSPIHRTLTKIH--ASSSSKSPNSQLPLPSKFGRQNENNI-------PTMAEIVAAGEAQNLSLRLQTLGPFFRITAKSLGTEREI
        MEL T+ IPRIP    PIHR LTK H  +SSSSKSPN QLPLPSK  +  +  I       PTMAEIVAAGEAQN+SLRLQTLGPFFRITAKSL ++REI
Subjt:  MELFTITIPRIPHKNSPIHRTLTKIH--ASSSSKSPNSQLPLPSKFGRQNENNI-------PTMAEIVAAGEAQNLSLRLQTLGPFFRITAKSLGTEREI

Query:  GKAEGLVRVWLGGKILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKSMYEVSGSKLKDIGDMLV
        GKAEGL+RVWL G+ILHLDSIRL RESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKS+YEVSGSK+ DIGDMLV
Subjt:  GKAEGLVRVWLGGKILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKSMYEVSGSKLKDIGDMLV

Query:  WGGIGTRMDAPIDSLLLKWCTRFK
        WGG+GTRMDAPI++LLLKWC+RFK
Subjt:  WGGIGTRMDAPIDSLLLKWCTRFK

A0A6J1JB84 uncharacterized protein LOC1114828883.2e-9279.02Show/hide
Query:  MELFTITIPRIPHKNSPIHRTLTKIH--ASSSSKSPNSQLPLPSKFGRQNE-------NNIPTMAEIVAAGEAQNLSLRLQTLGPFFRITAKSLGTEREI
        MEL T+ IPRIP   SPIHR LTK H  +SSSSKSPN QLPLPSK  +  +          PTMAEI+AAGEAQN+SLRLQTLGPFFRITAKSL ++REI
Subjt:  MELFTITIPRIPHKNSPIHRTLTKIH--ASSSSKSPNSQLPLPSKFGRQNE-------NNIPTMAEIVAAGEAQNLSLRLQTLGPFFRITAKSLGTEREI

Query:  GKAEGLVRVWLGGKILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKSMYEVSGSKLKDIGDMLV
        GKAEGL+RVWL G+ILHLDSIRL RESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGF+S+YEVSGS + DIGDMLV
Subjt:  GKAEGLVRVWLGGKILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKSMYEVSGSKLKDIGDMLV

Query:  WGGIGTRMDAPIDSLLLKWCTRFK
        WGG+GTRMDAPI++LL KWC+RFK
Subjt:  WGGIGTRMDAPIDSLLLKWCTRFK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTTATTCACAATCACAATTCCCCGAATCCCCCATAAAAATTCCCCAATTCACAGAACCCTAACTAAAATCCACGCCTCATCCTCATCCAAATCCCCTAATTCACA
ATTACCACTTCCATCAAAATTCGGGCGGCAAAATGAAAACAACATTCCGACGATGGCAGAGATTGTGGCAGCGGGGGAGGCCCAGAATCTGAGCCTCCGTCTGCAAACAT
TGGGGCCGTTTTTCCGAATAACAGCGAAAAGCTTGGGAACGGAGAGAGAGATCGGGAAGGCGGAAGGTTTGGTGAGAGTGTGGTTGGGAGGGAAGATTCTTCATCTTGAT
TCGATTCGATTGAACAGAGAAAGCTTGGGAATGGAGAAATCCATCTTTGGGCTTGGATTGTTCATCGGTGCTGTTGCGATTCGGTATGGGTATGATTGTGGTTGCAAAAC
GGCGGAGTTATTGGCCATTAATGACTCCGATCTTTACCATTCCAAGCTGGTTAGATTCTACACAAGGATTGGGTTCAAGAGTATGTATGAAGTGAGTGGTTCAAAGTTAA
AAGACATTGGAGACATGCTGGTGTGGGGAGGGATTGGGACTAGAATGGATGCTCCCATTGACTCCCTTCTACTTAAATGGTGCACAAGGTTTAAACCTCACTAG
mRNA sequenceShow/hide mRNA sequence
AAAGTTTACGAGTATAATAAACGACTGATAATTTTAAAAGCACTTTTATCCATCAAAGTATATGATTGAGAGTTGGATGAAAGATGGAATTCCCCAACCTATGAAACAAC
ACCTTCCCCAATTTGCATTTCCATGTTTCCTCACTAAATTCAATACCTTCAAAACTCCCGCCATTAATGGAGTTATTCACAATCACAATTCCCCGAATCCCCCATAAAAA
TTCCCCAATTCACAGAACCCTAACTAAAATCCACGCCTCATCCTCATCCAAATCCCCTAATTCACAATTACCACTTCCATCAAAATTCGGGCGGCAAAATGAAAACAACA
TTCCGACGATGGCAGAGATTGTGGCAGCGGGGGAGGCCCAGAATCTGAGCCTCCGTCTGCAAACATTGGGGCCGTTTTTCCGAATAACAGCGAAAAGCTTGGGAACGGAG
AGAGAGATCGGGAAGGCGGAAGGTTTGGTGAGAGTGTGGTTGGGAGGGAAGATTCTTCATCTTGATTCGATTCGATTGAACAGAGAAAGCTTGGGAATGGAGAAATCCAT
CTTTGGGCTTGGATTGTTCATCGGTGCTGTTGCGATTCGGTATGGGTATGATTGTGGTTGCAAAACGGCGGAGTTATTGGCCATTAATGACTCCGATCTTTACCATTCCA
AGCTGGTTAGATTCTACACAAGGATTGGGTTCAAGAGTATGTATGAAGTGAGTGGTTCAAAGTTAAAAGACATTGGAGACATGCTGGTGTGGGGAGGGATTGGGACTAGA
ATGGATGCTCCCATTGACTCCCTTCTACTTAAATGGTGCACAAGGTTTAAACCTCACTAGTTCCTTTTTTTCCTTTTCTTTTGTTAATTTATAAGTAAGATGTATGATTT
GTATGCATAGTTCACACTTAGGTTAAAGATG
Protein sequenceShow/hide protein sequence
MELFTITIPRIPHKNSPIHRTLTKIHASSSSKSPNSQLPLPSKFGRQNENNIPTMAEIVAAGEAQNLSLRLQTLGPFFRITAKSLGTEREIGKAEGLVRVWLGGKILHLD
SIRLNRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKSMYEVSGSKLKDIGDMLVWGGIGTRMDAPIDSLLLKWCTRFKPH