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CSPI04G00260 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G00260
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr4:174092..174585
RNA-Seq ExpressionCSPI04G00260
SyntenyCSPI04G00260
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044331.1 hypothetical protein E6C27_scaffold46G00540 [Cucumis melo var. makuwa]1.4e-3688.89Show/hide
Query:  MVFVLLVANSVRATDIITIDEA-TEVNSDEVNKAGLEMIFAPRKLKLRNGGSRLGVCLLVGKPCLSDADCPSGCYCKPVPLLNIGYCGFL
        M FVLLVANSVRATDIITIDE   EVNSDEVN+AGLE IFAPRKLKL+NGG RLGVCLLVGKPC+SDADCPSGCYCKPVPLL+IGYCGFL
Subjt:  MVFVLLVANSVRATDIITIDEA-TEVNSDEVNKAGLEMIFAPRKLKLRNGGSRLGVCLLVGKPCLSDADCPSGCYCKPVPLLNIGYCGFL
KAA0044332.1 hypothetical protein E6C27_scaffold46G00550 [Cucumis melo var. makuwa]2.0e-0644Show/hide
Query:  MSKKTLVVLAMVFVLLVANSVRATDIITIDEATEVNSDEVNK-AGLEMIFAPRKLKLRNG---GSRLGVCLLVGKPCLSDADCPSGCYCKPVPLLNIGYC
        MSKK +  LAM  ++L+A S  AT    +DE  E+ SDE N      M    RK+ ++ G   GS  G+CL+VG PC SD +C SGC CK  P+L +G C
Subjt:  MSKKTLVVLAMVFVLLVANSVRATDIITIDEATEVNSDEVNK-AGLEMIFAPRKLKLRNG---GSRLGVCLLVGKPCLSDADCPSGCYCKPVPLLNIGYC
KGN52756.1 hypothetical protein Csa_014977 [Cucumis sativus]8.8e-47100Show/hide
Query:  MSKKTLVVLAMVFVLLVANSVRATDIITIDEATEVNSDEVNKAGLEMIFAPRKLKLRNGGSRLGVCLLVGKPCLSDADCPSGCYCKPVPLLNIGYCGFL
        MSKKTLVVLAMVFVLLVANSVRATDIITIDEATEVNSDEVNKAGLEMIFAPRKLKLRNGGSRLGVCLLVGKPCLSDADCPSGCYCKPVPLLNIGYCGFL
Subjt:  MSKKTLVVLAMVFVLLVANSVRATDIITIDEATEVNSDEVNKAGLEMIFAPRKLKLRNGGSRLGVCLLVGKPCLSDADCPSGCYCKPVPLLNIGYCGFL
TYK29460.1 hypothetical protein E5676_scaffold655G00540 [Cucumis melo var. makuwa]1.1e-3688.42Show/hide
Query:  MSKKTLVVLAMVFVLLVANSVRATDIITIDEA-TEVNSDEVNKAGLEMIFAPRKLKLRNGGSRLGVCLLVGKPCLSDADCPSGCYCKPVPLLNIG
        MSKK LVVLAM FVLLVANSVRATDIITIDE   EVNSDEVN+AGLE IFAPRKLKL+NGG RLGVCLLVGKPC+SDADCPSGCYCKPVPLL+IG
Subjt:  MSKKTLVVLAMVFVLLVANSVRATDIITIDEA-TEVNSDEVNKAGLEMIFAPRKLKLRNGGSRLGVCLLVGKPCLSDADCPSGCYCKPVPLLNIG
TYK29461.1 hypothetical protein E5676_scaffold655G00550 [Cucumis melo var. makuwa]1.2e-0644Show/hide
Query:  MSKKTLVVLAMVFVLLVANSVRATDIITIDEATEVNSDEVNK-AGLEMIFAPRKLKLRNG---GSRLGVCLLVGKPCLSDADCPSGCYCKPVPLLNIGYC
        MSKK + +LAM  ++L+A S  AT    +DE  E+ SDE N      M    RK+ ++ G   GS  G+CL+VG PC SD +C SGC CK  P+L +G C
Subjt:  MSKKTLVVLAMVFVLLVANSVRATDIITIDEATEVNSDEVNK-AGLEMIFAPRKLKLRNG---GSRLGVCLLVGKPCLSDADCPSGCYCKPVPLLNIGYC
TrEMBL top hitse value%identityAlignment
A0A0A0KY29 Uncharacterized protein4.2e-47100Show/hide
Query:  MSKKTLVVLAMVFVLLVANSVRATDIITIDEATEVNSDEVNKAGLEMIFAPRKLKLRNGGSRLGVCLLVGKPCLSDADCPSGCYCKPVPLLNIGYCGFL
        MSKKTLVVLAMVFVLLVANSVRATDIITIDEATEVNSDEVNKAGLEMIFAPRKLKLRNGGSRLGVCLLVGKPCLSDADCPSGCYCKPVPLLNIGYCGFL
Subjt:  MSKKTLVVLAMVFVLLVANSVRATDIITIDEATEVNSDEVNKAGLEMIFAPRKLKLRNGGSRLGVCLLVGKPCLSDADCPSGCYCKPVPLLNIGYCGFL
A0A5A7TM06 Uncharacterized protein9.5e-0744Show/hide
Query:  MSKKTLVVLAMVFVLLVANSVRATDIITIDEATEVNSDEVNK-AGLEMIFAPRKLKLRNG---GSRLGVCLLVGKPCLSDADCPSGCYCKPVPLLNIGYC
        MSKK +  LAM  ++L+A S  AT    +DE  E+ SDE N      M    RK+ ++ G   GS  G+CL+VG PC SD +C SGC CK  P+L +G C
Subjt:  MSKKTLVVLAMVFVLLVANSVRATDIITIDEATEVNSDEVNK-AGLEMIFAPRKLKLRNG---GSRLGVCLLVGKPCLSDADCPSGCYCKPVPLLNIGYC
A0A5A7TRX6 Uncharacterized protein6.8e-3788.89Show/hide
Query:  MVFVLLVANSVRATDIITIDEA-TEVNSDEVNKAGLEMIFAPRKLKLRNGGSRLGVCLLVGKPCLSDADCPSGCYCKPVPLLNIGYCGFL
        M FVLLVANSVRATDIITIDE   EVNSDEVN+AGLE IFAPRKLKL+NGG RLGVCLLVGKPC+SDADCPSGCYCKPVPLL+IGYCGFL
Subjt:  MVFVLLVANSVRATDIITIDEA-TEVNSDEVNKAGLEMIFAPRKLKLRNGGSRLGVCLLVGKPCLSDADCPSGCYCKPVPLLNIGYCGFL
A0A5D3E1J3 Uncharacterized protein5.6e-0744Show/hide
Query:  MSKKTLVVLAMVFVLLVANSVRATDIITIDEATEVNSDEVNK-AGLEMIFAPRKLKLRNG---GSRLGVCLLVGKPCLSDADCPSGCYCKPVPLLNIGYC
        MSKK + +LAM  ++L+A S  AT    +DE  E+ SDE N      M    RK+ ++ G   GS  G+CL+VG PC SD +C SGC CK  P+L +G C
Subjt:  MSKKTLVVLAMVFVLLVANSVRATDIITIDEATEVNSDEVNK-AGLEMIFAPRKLKLRNG---GSRLGVCLLVGKPCLSDADCPSGCYCKPVPLLNIGYC
A0A5D3E1P7 Uncharacterized protein5.2e-3788.42Show/hide
Query:  MSKKTLVVLAMVFVLLVANSVRATDIITIDEA-TEVNSDEVNKAGLEMIFAPRKLKLRNGGSRLGVCLLVGKPCLSDADCPSGCYCKPVPLLNIG
        MSKK LVVLAM FVLLVANSVRATDIITIDE   EVNSDEVN+AGLE IFAPRKLKL+NGG RLGVCLLVGKPC+SDADCPSGCYCKPVPLL+IG
Subjt:  MSKKTLVVLAMVFVLLVANSVRATDIITIDEA-TEVNSDEVNKAGLEMIFAPRKLKLRNGGSRLGVCLLVGKPCLSDADCPSGCYCKPVPLLNIG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCAAGAAGACGCTCGTCGTGTTAGCAATGGTGTTCGTGCTACTCGTAGCCAATTCTGTCAGAGCCACAGACATCATCACCATTGATGAGGCGACCGAAGTCAATTC
CGATGAGGTCAACAAAGCTGGTTTGGAGATGATATTTGCCCCAAGAAAATTAAAGCTGAGAAATGGAGGGTCTAGGCTTGGAGTATGTCTGCTTGTAGGCAAGCCATGCT
TGAGTGATGCAGATTGTCCTTCTGGGTGCTATTGCAAACCTGTTCCACTACTAAATATTGGGTACTGTGGCTTTCTTTGA
mRNA sequenceShow/hide mRNA sequence
CCTCTCCAAATGATCAAACTAAAATTCCATAAATAGAAGAAAGAACTTAAGCAAAATCCCTCTTTAAATCCCAAACCATCCATAGTATAGCCAAAGAAAGAGAGAGATCT
AGAGAGCGAGATCATGAGCAAGAAGACGCTCGTCGTGTTAGCAATGGTGTTCGTGCTACTCGTAGCCAATTCTGTCAGAGCCACAGACATCATCACCATTGATGAGGCGA
CCGAAGTCAATTCCGATGAGGTCAACAAAGCTGGTTTGGAGATGATATTTGCCCCAAGAAAATTAAAGCTGAGAAATGGAGGGTCTAGGCTTGGAGTATGTCTGCTTGTA
GGCAAGCCATGCTTGAGTGATGCAGATTGTCCTTCTGGGTGCTATTGCAAACCTGTTCCACTACTAAATATTGGGTACTGTGGCTTTCTTTGATTGTTAGTTAATGTATG
GTAATGATGATGTCCCTCAAGAATAAAATGGAGGAGCCCTGTGTTTATGATGTG
Protein sequenceShow/hide protein sequence
MSKKTLVVLAMVFVLLVANSVRATDIITIDEATEVNSDEVNKAGLEMIFAPRKLKLRNGGSRLGVCLLVGKPCLSDADCPSGCYCKPVPLLNIGYCGFL