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CSPI04G00290 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G00290
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionGlycyl-tRNA synthetase beta subunit
Genome locationChr4:179240..179594
RNA-Seq ExpressionCSPI04G00290
SyntenyCSPI04G00290
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044332.1 hypothetical protein E6C27_scaffold46G00550 [Cucumis melo var. makuwa]1.0e-3480.77Show/hide
Query:  MME-MRKKVGLLAMAVLMLMVISARATSSEVGGVIELPSDEASEVVPTNMEMWSRKMMKEGGRKGD-NGLCLIIGTPCNSDANCLSGCKCRTTLILKLGL
        MME M KKVG LAMAVLMLM ISA ATSSEV  VIELPSDEA+ VV TNMEMWSRKMMKEG RKG  NGLCLI+GTPCNSD NC SGC+C+TT ILKLG+
Subjt:  MME-MRKKVGLLAMAVLMLMVISARATSSEVGGVIELPSDEASEVVPTNMEMWSRKMMKEGGRKGD-NGLCLIIGTPCNSDANCLSGCKCRTTLILKLGL

Query:  CSPF
        CSPF
Subjt:  CSPF

KAE8649030.1 hypothetical protein Csa_015018 [Cucumis sativus]3.7e-48100Show/hide
Query:  MMEMRKKVGLLAMAVLMLMVISARATSSEVGGVIELPSDEASEVVPTNMEMWSRKMMKEGGRKGDNGLCLIIGTPCNSDANCLSGCKCRTTLILKLGLCS
        MMEMRKKVGLLAMAVLMLMVISARATSSEVGGVIELPSDEASEVVPTNMEMWSRKMMKEGGRKGDNGLCLIIGTPCNSDANCLSGCKCRTTLILKLGLCS
Subjt:  MMEMRKKVGLLAMAVLMLMVISARATSSEVGGVIELPSDEASEVVPTNMEMWSRKMMKEGGRKGDNGLCLIIGTPCNSDANCLSGCKCRTTLILKLGLCS

Query:  PF
        PF
Subjt:  PF

TYK29461.1 hypothetical protein E5676_scaffold655G00550 [Cucumis melo var. makuwa]3.6e-3581.73Show/hide
Query:  MME-MRKKVGLLAMAVLMLMVISARATSSEVGGVIELPSDEASEVVPTNMEMWSRKMMKEGGRKGD-NGLCLIIGTPCNSDANCLSGCKCRTTLILKLGL
        MME M KKVGLLAMAVLMLM ISA ATSSEV  VIELPSDEA+ VV TNMEMWSRKMMKEG RKG  NGLCLI+GTPCNSD NC SGC+C+TT ILKLG+
Subjt:  MME-MRKKVGLLAMAVLMLMVISARATSSEVGGVIELPSDEASEVVPTNMEMWSRKMMKEGGRKGD-NGLCLIIGTPCNSDANCLSGCKCRTTLILKLGL

Query:  CSPF
        CSPF
Subjt:  CSPF

TrEMBL top hitse value%identityAlignment
A0A0A0KV17 Glycyl-tRNA synthetase beta subunit1.2e-0493.94Show/hide
Query:  MAVLMLMVISARATSSEVGGVIELPSDEASEVV
        MAVLMLMVISARATSSEVGGVIELPSDEASE +
Subjt:  MAVLMLMVISARATSSEVGGVIELPSDEASEVV

A0A0A0KY29 Uncharacterized protein7.8e-0436.08Show/hide
Query:  RKKVGLLAMAVLMLMVISARATS-SEVGGVIELPSDEASEVVPTNMEMWSRKM-MKEGGRKGDNGLCLIIGTPCNSDANCLSGCKCRTTLILKLGLC
        +K + +LAM  ++L+  S RAT    +    E+ SDE ++     M    RK+ ++ GG +   G+CL++G PC SDA+C SGC C+   +L +G C
Subjt:  RKKVGLLAMAVLMLMVISARATS-SEVGGVIELPSDEASEVVPTNMEMWSRKM-MKEGGRKGDNGLCLIIGTPCNSDANCLSGCKCRTTLILKLGLC

A0A5A7TM06 Uncharacterized protein5.0e-3580.77Show/hide
Query:  MME-MRKKVGLLAMAVLMLMVISARATSSEVGGVIELPSDEASEVVPTNMEMWSRKMMKEGGRKGD-NGLCLIIGTPCNSDANCLSGCKCRTTLILKLGL
        MME M KKVG LAMAVLMLM ISA ATSSEV  VIELPSDEA+ VV TNMEMWSRKMMKEG RKG  NGLCLI+GTPCNSD NC SGC+C+TT ILKLG+
Subjt:  MME-MRKKVGLLAMAVLMLMVISARATSSEVGGVIELPSDEASEVVPTNMEMWSRKMMKEGGRKGD-NGLCLIIGTPCNSDANCLSGCKCRTTLILKLGL

Query:  CSPF
        CSPF
Subjt:  CSPF

A0A5D3E1J3 Uncharacterized protein1.7e-3581.73Show/hide
Query:  MME-MRKKVGLLAMAVLMLMVISARATSSEVGGVIELPSDEASEVVPTNMEMWSRKMMKEGGRKGD-NGLCLIIGTPCNSDANCLSGCKCRTTLILKLGL
        MME M KKVGLLAMAVLMLM ISA ATSSEV  VIELPSDEA+ VV TNMEMWSRKMMKEG RKG  NGLCLI+GTPCNSD NC SGC+C+TT ILKLG+
Subjt:  MME-MRKKVGLLAMAVLMLMVISARATSSEVGGVIELPSDEASEVVPTNMEMWSRKMMKEGGRKGD-NGLCLIIGTPCNSDANCLSGCKCRTTLILKLGL

Query:  CSPF
        CSPF
Subjt:  CSPF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGAGATGAGAAAGAAGGTTGGTTTGTTAGCAATGGCGGTCCTGATGCTCATGGTCATTTCAGCTCGAGCCACCTCCTCCGAAGTCGGTGGGGTGATTGAACTCCC
GTCCGATGAGGCGAGCGAGGTTGTGCCAACGAATATGGAGATGTGGTCGAGGAAAATGATGAAAGAAGGAGGCCGAAAGGGAGACAATGGACTATGCTTGATTATAGGCA
CTCCATGCAACAGCGATGCAAACTGCTTATCTGGGTGCAAGTGCAGAACAACTCTAATATTAAAACTGGGATTATGTAGTCCCTTTTGA
mRNA sequenceShow/hide mRNA sequence
AAGAAAAGAAAAAATATCATATATGATGGAGATGAGAAAGAAGGTTGGTTTGTTAGCAATGGCGGTCCTGATGCTCATGGTCATTTCAGCTCGAGCCACCTCCTCCGAAG
TCGGTGGGGTGATTGAACTCCCGTCCGATGAGGCGAGCGAGGTTGTGCCAACGAATATGGAGATGTGGTCGAGGAAAATGATGAAAGAAGGAGGCCGAAAGGGAGACAAT
GGACTATGCTTGATTATAGGCACTCCATGCAACAGCGATGCAAACTGCTTATCTGGGTGCAAGTGCAGAACAACTCTAATATTAAAACTGGGATTATGTAGTCCCTTTTG
ATTATCAATTTATGTATGTTTTCCT
Protein sequenceShow/hide protein sequence
MMEMRKKVGLLAMAVLMLMVISARATSSEVGGVIELPSDEASEVVPTNMEMWSRKMMKEGGRKGDNGLCLIIGTPCNSDANCLSGCKCRTTLILKLGLCSPF