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CSPI04G00390 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G00390
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr4:204782..205079
RNA-Seq ExpressionCSPI04G00390
SyntenyCSPI04G00390
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044341.1 hypothetical protein E6C27_scaffold46G00670 [Cucumis melo var. makuwa]6.0e-1163.29Show/hide
Query:  MEMKNKVALVAMVVVMVVMTRSATVTAAMDEGIELPTNGEASYYDTPPPPRVCPIMILPCKTDSECSPCYCN--NGSCI
        MEMKNK ALVAMVV MVVM +S T T   DE IEL + GE +        RVCP  ILPCKTDSECSPC CN  +GSCI
Subjt:  MEMKNKVALVAMVVVMVVMTRSATVTAAMDEGIELPTNGEASYYDTPPPPRVCPIMILPCKTDSECSPCYCN--NGSCI
KGN52766.1 hypothetical protein Csa_015422 [Cucumis sativus]1.3e-34100Show/hide
Query:  MEMKNKVALVAMVVVMVVMTRSATVTAAMDEGIELPTNGEASYYDTPPPPRVCPIMILPCKTDSECSPCYCNNGSCI
        MEMKNKVALVAMVVVMVVMTRSATVTAAMDEGIELPTNGEASYYDTPPPPRVCPIMILPCKTDSECSPCYCNNGSCI
Subjt:  MEMKNKVALVAMVVVMVVMTRSATVTAAMDEGIELPTNGEASYYDTPPPPRVCPIMILPCKTDSECSPCYCNNGSCI
KGN52767.1 hypothetical protein Csa_015168 [Cucumis sativus]8.7e-1058.23Show/hide
Query:  MEMKNKVALVAMVVVMVVMTRSATVTAAMDEGIELPTNGEASYYDTPPPPRVCPIMILPCKTDSECSPCYCN--NGSCI
        MEMKNK ALVAMVV MVVM +S T T   DE IEL + GE +        RVCP  +LPC+TDSECSPC CN  +G+C+
Subjt:  MEMKNKVALVAMVVVMVVMTRSATVTAAMDEGIELPTNGEASYYDTPPPPRVCPIMILPCKTDSECSPCYCN--NGSCI
TYK29470.1 hypothetical protein E5676_scaffold655G00670 [Cucumis melo var. makuwa]1.3e-1062.03Show/hide
Query:  MEMKNKVALVAMVVVMVVMTRSATVTAAMDEGIELPTNGEASYYDTPPPPRVCPIMILPCKTDSECSPCYCN--NGSCI
        MEMKNK ALVAMVV MVVM +S T T   DE IE+ + GE +        RVCP  ILPCKTDSECSPC CN  +GSCI
Subjt:  MEMKNKVALVAMVVVMVVMTRSATVTAAMDEGIELPTNGEASYYDTPPPPRVCPIMILPCKTDSECSPCYCN--NGSCI
TrEMBL top hitse value%identityAlignment
A0A0A0KWE9 Uncharacterized protein4.2e-1058.23Show/hide
Query:  MEMKNKVALVAMVVVMVVMTRSATVTAAMDEGIELPTNGEASYYDTPPPPRVCPIMILPCKTDSECSPCYCN--NGSCI
        MEMKNK ALVAMVV MVVM +S T T   DE IEL + GE +        RVCP  +LPC+TDSECSPC CN  +G+C+
Subjt:  MEMKNKVALVAMVVVMVVMTRSATVTAAMDEGIELPTNGEASYYDTPPPPRVCPIMILPCKTDSECSPCYCN--NGSCI
A0A0A0KY39 Uncharacterized protein6.5e-35100Show/hide
Query:  MEMKNKVALVAMVVVMVVMTRSATVTAAMDEGIELPTNGEASYYDTPPPPRVCPIMILPCKTDSECSPCYCNNGSCI
        MEMKNKVALVAMVVVMVVMTRSATVTAAMDEGIELPTNGEASYYDTPPPPRVCPIMILPCKTDSECSPCYCNNGSCI
Subjt:  MEMKNKVALVAMVVVMVVMTRSATVTAAMDEGIELPTNGEASYYDTPPPPRVCPIMILPCKTDSECSPCYCNNGSCI
A0A5A7TRY5 Uncharacterized protein2.9e-1163.29Show/hide
Query:  MEMKNKVALVAMVVVMVVMTRSATVTAAMDEGIELPTNGEASYYDTPPPPRVCPIMILPCKTDSECSPCYCN--NGSCI
        MEMKNK ALVAMVV MVVM +S T T   DE IEL + GE +        RVCP  ILPCKTDSECSPC CN  +GSCI
Subjt:  MEMKNKVALVAMVVVMVVMTRSATVTAAMDEGIELPTNGEASYYDTPPPPRVCPIMILPCKTDSECSPCYCN--NGSCI
A0A5D3E1Q5 Uncharacterized protein6.5e-1162.03Show/hide
Query:  MEMKNKVALVAMVVVMVVMTRSATVTAAMDEGIELPTNGEASYYDTPPPPRVCPIMILPCKTDSECSPCYCN--NGSCI
        MEMKNK ALVAMVV MVVM +S T T   DE IE+ + GE +        RVCP  ILPCKTDSECSPC CN  +GSCI
Subjt:  MEMKNKVALVAMVVVMVVMTRSATVTAAMDEGIELPTNGEASYYDTPPPPRVCPIMILPCKTDSECSPCYCN--NGSCI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATGAAAAACAAGGTTGCTTTGGTGGCCATGGTGGTTGTGATGGTGGTTATGACTCGATCAGCCACTGTCACCGCTGCCATGGATGAGGGGATTGAACTCCCAAC
CAACGGTGAAGCAAGTTATTATGATACGCCACCGCCTCCTCGTGTTTGTCCTATTATGATATTACCATGCAAAACTGATTCTGAGTGTTCTCCATGCTATTGTAACAATG
GCTCCTGCATTTGA
mRNA sequenceShow/hide mRNA sequence
ATACAAGGCATGTGAAAGCCAATGAAAACCATAATATACTAGAAAGAGAGATCAGATTCACATATGGAGATGAAAAACAAGGTTGCTTTGGTGGCCATGGTGGTTGTGAT
GGTGGTTATGACTCGATCAGCCACTGTCACCGCTGCCATGGATGAGGGGATTGAACTCCCAACCAACGGTGAAGCAAGTTATTATGATACGCCACCGCCTCCTCGTGTTT
GTCCTATTATGATATTACCATGCAAAACTGATTCTGAGTGTTCTCCATGCTATTGTAACAATGGCTCCTGCATTTGAC
Protein sequenceShow/hide protein sequence
MEMKNKVALVAMVVVMVVMTRSATVTAAMDEGIELPTNGEASYYDTPPPPRVCPIMILPCKTDSECSPCYCNNGSCI