CuGenDBv2

Gene ID	CSPI04G00470
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	40S ribosomal protein S29-like
Genome location	Chr4:249048..250896
RNA-Seq Expression	CSPI04G00470
Synteny	CSPI04G00470
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0022627 - cytosolic small ribosomal subunit (cellular component) GO:0003723 - RNA binding (molecular function) GO:0003735 - structural constituent of ribosome (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR001209 - Ribosomal protein S14 IPR039744 - 40S ribosomal protein S29/30S ribosomal protein S14 type Z IPR043140 - Ribosomal protein S14/S29

Homology

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GenBank top hits

e value

%identity

Alignment

XP_002271801.1 PREDICTED: 40S ribosomal protein S29 [Vitis vinifera]

1.2e-27

100

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Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
        MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR

XP_011078121.1 40S ribosomal protein S29 [Sesamum indicum]

1.5e-27

98.21

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Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
        MGHSN+WNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR

XP_015866898.1 40S ribosomal protein S29 [Ziziphus jujuba]

2.0e-27

98.21

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Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
        MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYG+MCCRQCFRSNAKEIGFIKYR
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR

XP_015866899.1 40S ribosomal protein S29 [Ziziphus jujuba]

2.0e-27

98.21

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Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
        MGHSNVWNSHPKNYGPGSRTCRVCGNPHG+IRKYGLMCCRQCFRSNAKEIGFIKYR
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR

XP_015889056.1 40S ribosomal protein S29-like [Ziziphus jujuba]

2.0e-27

98.21

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Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
        MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYG+MCCRQCFRSNAKEIGFIKYR
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BZQ2 40S ribosomal protein S29

5.6e-28

100

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Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
        MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR

A0A1S3V2W1 40S ribosomal protein S29

5.6e-28

100

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Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
        MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR

A0A2G9HKH9 40S ribosomal protein S29

5.6e-28

100

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Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
        MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR

A0A2P5DND1 Ribosomal protein

5.6e-28

100

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Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
        MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR

A0A6J5Y987 Uncharacterized protein

5.6e-28

100

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Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
        MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR

SwissProt top hits

e value

%identity

Alignment

Q4PM47 40S ribosomal protein S29

2.3e-18

70.37

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Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK
        MGH N+W SHP+ YGPGSR CRVC N HGLIRKYGL  CR+CFR  A +IGF K
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK

Q5I7K3 40S ribosomal protein S29

3.5e-27

91.07

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Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
        MGHSNVWNSHPKNYG GSR CRVCGN HGLIRKYGLMCCRQCFRS+AK+IGFIKYR
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR

Q680P8 40S ribosomal protein S29

2.0e-27

92.86

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Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
        MGHSNVWNSHPK YGPGSR CRVCGN HGLIRKYGL CCRQCFRSNAKEIGFIKYR
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR

Q757G1 40S ribosomal protein S29

3.9e-18

69.64

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Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
        M H NVW SHP+NYG GSR CRVC +  GLIRKYGL  CRQCFR  A +IGF KYR
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR

Q7XYB0 40S ribosomal protein S29

1.4e-20

69.64

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Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
        MGH N+W SHP+ YG GSR+C++CGN HGLIRKY +  CRQCFR  AK+IGFIKYR
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR

Arabidopsis top hits

e value

%identity

Alignment

AT3G43980.1 Ribosomal protein S14p/S29e family protein

1.5e-28

92.86

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Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
        MGHSNVWNSHPK YGPGSR CRVCGN HGLIRKYGL CCRQCFRSNAKEIGFIKYR
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR

AT3G44010.1 Ribosomal protein S14p/S29e family protein

1.5e-28

92.86

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Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
        MGHSNVWNSHPK YGPGSR CRVCGN HGLIRKYGL CCRQCFRSNAKEIGFIKYR
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR

AT4G33865.1 Ribosomal protein S14p/S29e family protein

1.5e-28

92.86

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Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
        MGHSNVWNSHPK YGPGSR CRVCGN HGLIRKYGL CCRQCFRSNAKEIGFIKYR
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR

Sequences

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CDS sequence

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ATGGGACACTCGAACGTTTGGAACTCTCATCCTAAGAACTATGGACCTGGTTCTCGCACTTGTCGTGTGTGCGGAAATCCCCATGGGTTGATCAGGAAGTATGGACTTAT
GTGTTGCAGACAATGCTTCCGCAGCAATGCCAAGGAAATTGGTTTCATCAAGTACCGCTAA

mRNA sequence

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GTTTATCTCTCATATAAAATGGATCCTTTTTGCCGGCTTCTCCTTCCTCACAAAATTTTGTGCTTCACGTTGTGATTTCGGAGCATCTCAATACCCTAACAATCATGGGA
CACTCGAACGTTTGGAACTCTCATCCTAAGAACTATGGACCTGGTTCTCGCACTTGTCGTGTGTGCGGAAATCCCCATGGGTTGATCAGGAAGTATGGACTTATGTGTTG
CAGACAATGCTTCCGCAGCAATGCCAAGGAAATTGGTTTCATCAAGTACCGCTAAGAAGCTAATTATCCCTAGAAGAGAGAATGGGTTGAATTTACATTGAAGAAGGTTT
CCCATGTTTTGCTTTTGTTTACTCAGTATGGAATATGAAATGATTGTCAGAAGACGTTTTTGACACTTTTGTTCTGAACATTTAAAGTTTCTTAATTGAGCTTCTTGAGA
TTATTTTGACATATATTCCTTCCATTATTATTTTTCAGTTCTTCAGCCTGTTTGATGTGCGTGATGCCTAGTCAGTTTAGGAATCGGAGGGTTTAGGCTATATATATGGT
ATCGTTAATCAGTTTGTGATTGTAGTGAAAATAATTACGAGATAGTGTTTTATTTCCTTTAGTCTCTAAATTTTTTGTTGGAGCGTAGTTGAGCACATGAGCCTTAAAGT
TAGAAGTATCATTTCCCACTTTATCCATTAATACCAT

Protein sequence

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MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR

CSPI04G00470 (gene) of Cucumber (PI 183967) v1 genome