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CSPI04G00600 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G00600
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr4:305951..306409
RNA-Seq ExpressionCSPI04G00600
SyntenyCSPI04G00600
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044357.1 hypothetical protein E6C27_scaffold46G00840 [Cucumis melo var. makuwa]1.8e-1887.1Show/hide
Query:  MKVQHEKSSDSSSRTVGEKLAQAYRDVKV--ALTKNQGVGTRRNQREDPIRTIMFLGSWSHT
        MKVQHEKSSDSSSRT+GEKLAQAYRDVKV  ALTKN+GVG RRNQ+EDPIRTIMFLG WS T
Subjt:  MKVQHEKSSDSSSRTVGEKLAQAYRDVKV--ALTKNQGVGTRRNQREDPIRTIMFLGSWSHT

KAF5731457.1 hypothetical protein HS088_TW18G00135 [Tripterygium wilfordii]5.5e-0449.02Show/hide
Query:  DSSSRTVGEKLAQAYRDVKVALTKNQGVGTRRNQREDPIRTIMFLGSWSHT
        + S RT+ EKL  AY     + T  Q  G + ++ EDPIR +MFLGSWSHT
Subjt:  DSSSRTVGEKLAQAYRDVKVALTKNQGVGTRRNQREDPIRTIMFLGSWSHT

KGN52786.1 hypothetical protein Csa_015138 [Cucumis sativus]1.3e-24100Show/hide
Query:  MKVQHEKSSDSSSRTVGEKLAQAYRDVKVALTKNQGVGTRRNQREDPIRTIMFLGSWSHT
        MKVQHEKSSDSSSRTVGEKLAQAYRDVKVALTKNQGVGTRRNQREDPIRTIMFLGSWSHT
Subjt:  MKVQHEKSSDSSSRTVGEKLAQAYRDVKVALTKNQGVGTRRNQREDPIRTIMFLGSWSHT

TKY61797.1 hypothetical protein E2542_SST11650 [Spatholobus suberectus]1.9e-0449.18Show/hide
Query:  SDSSSRTVGEKLAQAYRDVKVALTKNQGVGTRR---------NQREDPIRTIMFLGSWSHT
        ++ SSR+VGEKL Q  +   VA+T +     RR         +Q EDPIRT+MFLGSWSHT
Subjt:  SDSSSRTVGEKLAQAYRDVKVALTKNQGVGTRR---------NQREDPIRTIMFLGSWSHT

TrEMBL top hitse value%identityAlignment
A0A0A0KY58 Uncharacterized protein6.1e-25100Show/hide
Query:  MKVQHEKSSDSSSRTVGEKLAQAYRDVKVALTKNQGVGTRRNQREDPIRTIMFLGSWSHT
        MKVQHEKSSDSSSRTVGEKLAQAYRDVKVALTKNQGVGTRRNQREDPIRTIMFLGSWSHT
Subjt:  MKVQHEKSSDSSSRTVGEKLAQAYRDVKVALTKNQGVGTRRNQREDPIRTIMFLGSWSHT

A0A5A7TR66 Uncharacterized protein8.5e-1987.1Show/hide
Query:  MKVQHEKSSDSSSRTVGEKLAQAYRDVKV--ALTKNQGVGTRRNQREDPIRTIMFLGSWSHT
        MKVQHEKSSDSSSRT+GEKLAQAYRDVKV  ALTKN+GVG RRNQ+EDPIRTIMFLG WS T
Subjt:  MKVQHEKSSDSSSRTVGEKLAQAYRDVKV--ALTKNQGVGTRRNQREDPIRTIMFLGSWSHT

A0A5N6QQU4 Uncharacterized protein5.9e-0444.16Show/hide
Query:  MKVQHEKSSDS----SSRTVGEKLAQAYRDVKVALTKN-----------QGVGTRR--NQREDPIRTIMFLGSWSHT
        MK QH     S    S RTVGEKL +AY   ++A+  N           + +  RR     EDPIRT+MFLGSWSHT
Subjt:  MKVQHEKSSDS----SSRTVGEKLAQAYRDVKVALTKN-----------QGVGTRR--NQREDPIRTIMFLGSWSHT

A0A7J7CC58 Uncharacterized protein2.6e-0449.02Show/hide
Query:  DSSSRTVGEKLAQAYRDVKVALTKNQGVGTRRNQREDPIRTIMFLGSWSHT
        + S RT+ EKL  AY     + T  Q  G + ++ EDPIR +MFLGSWSHT
Subjt:  DSSSRTVGEKLAQAYRDVKVALTKNQGVGTRRNQREDPIRTIMFLGSWSHT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTATTTACTCTACTTTCTCTCTTCTTCTTTTTGCATACATAGAGAATATGAAGGTTCAACATGAAAAAAGTAGTGATTCATCAAGTAGAACAGTTGGAGAGAAACT
TGCTCAAGCTTATCGGGATGTCAAGGTTGCCCTAACAAAAAACCAAGGCGTTGGAACGAGACGTAACCAAAGGGAAGATCCTATTAGAACCATAATGTTCTTGGGTTCAT
GGAGTCATACTTGA
mRNA sequenceShow/hide mRNA sequence
GGGGCAGAAGTTATATTAAAGAAGAAAAGAAAAAAGGCAAACCTGCCTTTTTCCTTGGCTATAAATATGGAGGCCAAAGATGTTTATTTACTCTACTTTCTCTCTTCTTC
TTTTTGCATACATAGAGAATATGAAGGTTCAACATGAAAAAAGTAGTGATTCATCAAGTAGAACAGTTGGAGAGAAACTTGCTCAAGCTTATCGGGATGTCAAGGTTGCC
CTAACAAAAAACCAAGGCGTTGGAACGAGACGTAACCAAAGGGAAGATCCTATTAGAACCATAATGTTCTTGGGTTCATGGAGTCATACTTGAACTAGTTACTACCGTTT
GTTTGATTAAACAAACTATTTCTTAAAAAACTTTCTTAACAACTGTATCGTTAAATGATCGTTCATTGTAAAAGTTAGTATATTGTTTTACAATAATAAACTATGACTTT
GAAAGGTTTTCATAAGATT
Protein sequenceShow/hide protein sequence
MFIYSTFSLLLFAYIENMKVQHEKSSDSSSRTVGEKLAQAYRDVKVALTKNQGVGTRRNQREDPIRTIMFLGSWSHT