; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI04G01130 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G01130
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionneuronal acetylcholine receptor subunit alpha-2-like
Genome locationChr4:618932..619480
RNA-Seq ExpressionCSPI04G01130
SyntenyCSPI04G01130
Gene Ontology termsNA
InterPro domainsIPR008480 - Protein of unknown function DUF761, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581289.1 hypothetical protein SDJN03_21291, partial [Cucurbita argyrosperma subsp. sororia]2.3e-2851.52Show/hide
Query:  TRFFHVRKAWKIILRQWKLHSHRR---AFPVDFRPLRRFIKRILHPTPTPLPPHYAERQFSFNDTPIFHLKFHSRRAPSASAALFLIPRFSCINPKVEFE
        T++   R+A K  LR WK+H+HRR   +FPVDFR + RFIKR++HPTPTPL P+ AERQFSFND PI HLK H R  PS                     
Subjt:  TRFFHVRKAWKIILRQWKLHSHRR---AFPVDFRPLRRFIKRILHPTPTPLPPHYAERQFSFNDTPIFHLKFHSRRAPSASAALFLIPRFSCINPKVEFE

Query:  RYEDCEWERRNYEEEEEEEEEEEEEEEEDGIDLKAEKFIKMFYEEMKMQSQVSYLRFDEFSDGEE
            C++             E EEEEEE+GID KAEKFIKMFYEEM++QSQVSYL  D FSD +E
Subjt:  RYEDCEWERRNYEEEEEEEEEEEEEEEEDGIDLKAEKFIKMFYEEMKMQSQVSYLRFDEFSDGEE

XP_008454304.1 PREDICTED: neuronal acetylcholine receptor subunit alpha-2-like [Cucumis melo]1.1e-5779.04Show/hide
Query:  MSNNTRFFHVRKAWKIILRQWKLHSHRRAFPVDFRPLRRFIKRILHPTPTPLPPHYAERQFSFNDTPIFHLKFHSRRAPSASA-ALFLIPRFSCINPKVE
        MS +T+FFHVRK WKI+         RR FPVDFRPLRRFIKRI+H TPTPLP HYAERQFSFNDTPIFH     RR PSASA  +F IPRFSCINPKVE
Subjt:  MSNNTRFFHVRKAWKIILRQWKLHSHRRAFPVDFRPLRRFIKRILHPTPTPLPPHYAERQFSFNDTPIFHLKFHSRRAPSASA-ALFLIPRFSCINPKVE

Query:  FERYEDCEWERRNYEEEEEEEEEEEEEEEEDGIDLKAEKFIKMFYEEMKMQSQVSYLRFDEFSDGEE
        FERY+DCEWE    EEEEEEEEEEEEEEEEDGIDLKAEKFIKMFYEEMKMQSQVSYLRFDEFSD +E
Subjt:  FERYEDCEWERRNYEEEEEEEEEEEEEEEEDGIDLKAEKFIKMFYEEMKMQSQVSYLRFDEFSDGEE

XP_011652950.1 uncharacterized protein LOC105435158 [Cucumis sativus]2.5e-8398.19Show/hide
Query:  MSNNTRFFHVRKAWKIILRQWKLHSHRRAFPVDFRPLRRFIKRILHPTPTPLPPHYAERQFSFNDTPIFHLKFHSRRAPSASAALFLIPRFSCINPKVEF
        MSNNTRFFHVRKAWKIILRQWKLHSHRRAFPVDFRPLRRFIKRILHPTPTPLPPHYAERQFSFNDTPIFHLKFHSRRAPSASAALFLIPRFSCINPKVEF
Subjt:  MSNNTRFFHVRKAWKIILRQWKLHSHRRAFPVDFRPLRRFIKRILHPTPTPLPPHYAERQFSFNDTPIFHLKFHSRRAPSASAALFLIPRFSCINPKVEF

Query:  ERYEDCEWERRNYEEEEEEEEEEEEEEEEDGIDLKAEKFIKMFYEEMKMQSQVSYLRFDEFSDGEE
        ERYEDCEWERRNY   EEEEEEEEEEEEEDGIDLKAEKFIKMFYEEMKMQSQVSYLRFDEFSDGEE
Subjt:  ERYEDCEWERRNYEEEEEEEEEEEEEEEEDGIDLKAEKFIKMFYEEMKMQSQVSYLRFDEFSDGEE

XP_022934217.1 uncharacterized protein LOC111441455 [Cucurbita moschata]2.3e-2851.52Show/hide
Query:  TRFFHVRKAWKIILRQWKLHSH---RRAFPVDFRPLRRFIKRILHPTPTPLPPHYAERQFSFNDTPIFHLKFHSRRAPSASAALFLIPRFSCINPKVEFE
        T++   R+A K  LR WK+H+H   RR+FPVDFR + RFIKR++HPTPTPL P+ AERQFSFND PI HLK H R  PS                     
Subjt:  TRFFHVRKAWKIILRQWKLHSH---RRAFPVDFRPLRRFIKRILHPTPTPLPPHYAERQFSFNDTPIFHLKFHSRRAPSASAALFLIPRFSCINPKVEFE

Query:  RYEDCEWERRNYEEEEEEEEEEEEEEEEDGIDLKAEKFIKMFYEEMKMQSQVSYLRFDEFSDGEE
            C++             E EEEEEE+GID KAEKFIKMFYEEM++QSQVSYL  D FSD +E
Subjt:  RYEDCEWERRNYEEEEEEEEEEEEEEEEDGIDLKAEKFIKMFYEEMKMQSQVSYLRFDEFSDGEE

XP_038906165.1 uncharacterized protein LOC120092045 [Benincasa hispida]4.1e-4967.58Show/hide
Query:  NNTRFFHVRKAWKIILRQWKLHSHRRAFPVDFRPLRRFIKRILH----PTPTPLPPHYAERQFSFNDTPIFHLKFHSRRAPSASAALFLIPRFSCINPKV
        +NT+    R+ WK ILRQ K H+HRR FPVDFRPLRRFIKR++H    PTP P+ PHY ERQFSFNDTPIFHLKFH R  PSASAALF  PRFSCINPKV
Subjt:  NNTRFFHVRKAWKIILRQWKLHSHRRAFPVDFRPLRRFIKRILH----PTPTPLPPHYAERQFSFNDTPIFHLKFHSRRAPSASAALFLIPRFSCINPKV

Query:  EFERYEDCEWERRNYEEEE--------------EEEEEEEEEEEEDGIDLKAEKFIKMFYEEMKMQSQVSYLRFDEFSDGEE
        EF    D E+E R  ++++              EEEEEEEEEEEEDGIDLKAEKFIKMFYEEMKMQSQVSYLR DEF D +E
Subjt:  EFERYEDCEWERRNYEEEE--------------EEEEEEEEEEEEDGIDLKAEKFIKMFYEEMKMQSQVSYLRFDEFSDGEE

TrEMBL top hitse value%identityAlignment
A0A0A0KYA9 Uncharacterized protein1.2e-8398.19Show/hide
Query:  MSNNTRFFHVRKAWKIILRQWKLHSHRRAFPVDFRPLRRFIKRILHPTPTPLPPHYAERQFSFNDTPIFHLKFHSRRAPSASAALFLIPRFSCINPKVEF
        MSNNTRFFHVRKAWKIILRQWKLHSHRRAFPVDFRPLRRFIKRILHPTPTPLPPHYAERQFSFNDTPIFHLKFHSRRAPSASAALFLIPRFSCINPKVEF
Subjt:  MSNNTRFFHVRKAWKIILRQWKLHSHRRAFPVDFRPLRRFIKRILHPTPTPLPPHYAERQFSFNDTPIFHLKFHSRRAPSASAALFLIPRFSCINPKVEF

Query:  ERYEDCEWERRNYEEEEEEEEEEEEEEEEDGIDLKAEKFIKMFYEEMKMQSQVSYLRFDEFSDGEE
        ERYEDCEWERRNY   EEEEEEEEEEEEEDGIDLKAEKFIKMFYEEMKMQSQVSYLRFDEFSDGEE
Subjt:  ERYEDCEWERRNYEEEEEEEEEEEEEEEEDGIDLKAEKFIKMFYEEMKMQSQVSYLRFDEFSDGEE

A0A1S3BZI3 neuronal acetylcholine receptor subunit alpha-2-like5.2e-5879.04Show/hide
Query:  MSNNTRFFHVRKAWKIILRQWKLHSHRRAFPVDFRPLRRFIKRILHPTPTPLPPHYAERQFSFNDTPIFHLKFHSRRAPSASA-ALFLIPRFSCINPKVE
        MS +T+FFHVRK WKI+         RR FPVDFRPLRRFIKRI+H TPTPLP HYAERQFSFNDTPIFH     RR PSASA  +F IPRFSCINPKVE
Subjt:  MSNNTRFFHVRKAWKIILRQWKLHSHRRAFPVDFRPLRRFIKRILHPTPTPLPPHYAERQFSFNDTPIFHLKFHSRRAPSASA-ALFLIPRFSCINPKVE

Query:  FERYEDCEWERRNYEEEEEEEEEEEEEEEEDGIDLKAEKFIKMFYEEMKMQSQVSYLRFDEFSDGEE
        FERY+DCEWE    EEEEEEEEEEEEEEEEDGIDLKAEKFIKMFYEEMKMQSQVSYLRFDEFSD +E
Subjt:  FERYEDCEWERRNYEEEEEEEEEEEEEEEEDGIDLKAEKFIKMFYEEMKMQSQVSYLRFDEFSDGEE

A0A444XGX3 Uncharacterized protein3.9e-1337.82Show/hide
Query:  KAWKI----ILRQWKLHSHRRAFPVDFRPLRRFIKRILHPTPTPLPP---HYAERQFSFNDTPIFHLKFHSRRAPSASAALFLIPRFSCINPKVEFE-RY
        +AWK+    +L   K    +R   ++ R + +++KR+ H T +       HY ER+ SF+ TPIFH+K +    P++S     +P   CINP V+F+  +
Subjt:  KAWKI----ILRQWKLHSHRRAFPVDFRPLRRFIKRILHPTPTPLPP---HYAERQFSFNDTPIFHLKFHSRRAPSASAALFLIPRFSCINPKVEFE-RY

Query:  EDCEWERRNYEEEEEEEEEEEEEEEEDGIDLKAEKFIKMFYEEMKMQSQVSYLRFD
        ED   +  N+EEE +++ EE+EE    GID +AE+FI  FYE+MK+Q Q+SYL+++
Subjt:  EDCEWERRNYEEEEEEEEEEEEEEEEDGIDLKAEKFIKMFYEEMKMQSQVSYLRFD

A0A5D3E0E5 Neuronal acetylcholine receptor subunit alpha-2-like5.2e-5879.04Show/hide
Query:  MSNNTRFFHVRKAWKIILRQWKLHSHRRAFPVDFRPLRRFIKRILHPTPTPLPPHYAERQFSFNDTPIFHLKFHSRRAPSASA-ALFLIPRFSCINPKVE
        MS +T+FFHVRK WKI+         RR FPVDFRPLRRFIKRI+H TPTPLP HYAERQFSFNDTPIFH     RR PSASA  +F IPRFSCINPKVE
Subjt:  MSNNTRFFHVRKAWKIILRQWKLHSHRRAFPVDFRPLRRFIKRILHPTPTPLPPHYAERQFSFNDTPIFHLKFHSRRAPSASA-ALFLIPRFSCINPKVE

Query:  FERYEDCEWERRNYEEEEEEEEEEEEEEEEDGIDLKAEKFIKMFYEEMKMQSQVSYLRFDEFSDGEE
        FERY+DCEWE    EEEEEEEEEEEEEEEEDGIDLKAEKFIKMFYEEMKMQSQVSYLRFDEFSD +E
Subjt:  FERYEDCEWERRNYEEEEEEEEEEEEEEEEDGIDLKAEKFIKMFYEEMKMQSQVSYLRFDEFSDGEE

A0A6J1F231 uncharacterized protein LOC1114414551.1e-2851.52Show/hide
Query:  TRFFHVRKAWKIILRQWKLHSH---RRAFPVDFRPLRRFIKRILHPTPTPLPPHYAERQFSFNDTPIFHLKFHSRRAPSASAALFLIPRFSCINPKVEFE
        T++   R+A K  LR WK+H+H   RR+FPVDFR + RFIKR++HPTPTPL P+ AERQFSFND PI HLK H R  PS                     
Subjt:  TRFFHVRKAWKIILRQWKLHSH---RRAFPVDFRPLRRFIKRILHPTPTPLPPHYAERQFSFNDTPIFHLKFHSRRAPSASAALFLIPRFSCINPKVEFE

Query:  RYEDCEWERRNYEEEEEEEEEEEEEEEEDGIDLKAEKFIKMFYEEMKMQSQVSYLRFDEFSDGEE
            C++             E EEEEEE+GID KAEKFIKMFYEEM++QSQVSYL  D FSD +E
Subjt:  RYEDCEWERRNYEEEEEEEEEEEEEEEEDGIDLKAEKFIKMFYEEMKMQSQVSYLRFDEFSDGEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G02170.1 unknown protein5.2e-1039.09Show/hide
Query:  HYAERQFSFNDTPIFHLKFHSRRAPSASAALFLIPRFSCINPKVEFERYEDCEWERRNYEEEEEEEEEEEE-EEEEDGIDLKAEKFIKMFYEEMKMQSQV
        +Y ERQ SF++TP+F++K      P++S    L+P   C  P V+F+   D E + ++Y +E +    +E   EEE G+D++AE+FI  FYE++K+Q QV
Subjt:  HYAERQFSFNDTPIFHLKFHSRRAPSASAALFLIPRFSCINPKVEFERYEDCEWERRNYEEEEEEEEEEEE-EEEEDGIDLKAEKFIKMFYEEMKMQSQV

Query:  SYLRFDEFSD
        SYL++ + +D
Subjt:  SYLRFDEFSD

AT5G38700.1 unknown protein9.9e-0937.93Show/hide
Query:  YAERQFSFNDTPIFHLKFHSRRAPSASAALFLIPRFSCINPKVEFERYEDCEWERRNY--------EEEEEEEEEEEEEEEEDGIDLKAEKFIKMFYEEM
        Y E+Q SF++TPIF++K H  R  S    L  I R +  +   E +  +D   + R+Y        E+ +    +++EEEEE G+D++AE+FI  FYE+M
Subjt:  YAERQFSFNDTPIFHLKFHSRRAPSASAALFLIPRFSCINPKVEFERYEDCEWERRNY--------EEEEEEEEEEEEEEEEDGIDLKAEKFIKMFYEEM

Query:  KMQSQVSYLRFDEFSD
        K+Q Q+SYL++ E +D
Subjt:  KMQSQVSYLRFDEFSD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCAATAACACTAGATTCTTTCATGTCCGCAAAGCTTGGAAAATCATCCTACGCCAATGGAAATTGCACTCCCACCGCCGCGCTTTTCCGGTGGATTTCCGCCCCTT
GCGCCGGTTCATCAAGCGAATCCTTCACCCAACTCCAACCCCTCTTCCCCCACATTATGCAGAGCGTCAATTCTCTTTCAACGACACCCCCATTTTCCATCTGAAATTCC
ACAGCCGTCGTGCCCCGTCTGCGTCGGCGGCTCTGTTCCTCATCCCCCGGTTCTCCTGCATAAACCCCAAGGTTGAGTTTGAGAGATACGAGGATTGTGAATGGGAGAGG
CGGAATTATGAAGAGGAGGAGGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATGGGATCGATTTGAAGGCGGAGAAGTTTATAAAAATGTTTTATGAGGAAAT
GAAAATGCAGAGTCAGGTATCGTATTTGCGGTTCGATGAGTTTTCTGATGGTGAAGAGTAA
mRNA sequenceShow/hide mRNA sequence
CTTTCTTCAATTTTAATCTCTTCACAGCATCACATTCCTTCTTCAACAATGTCCAATAACACTAGATTCTTTCATGTCCGCAAAGCTTGGAAAATCATCCTACGCCAATG
GAAATTGCACTCCCACCGCCGCGCTTTTCCGGTGGATTTCCGCCCCTTGCGCCGGTTCATCAAGCGAATCCTTCACCCAACTCCAACCCCTCTTCCCCCACATTATGCAG
AGCGTCAATTCTCTTTCAACGACACCCCCATTTTCCATCTGAAATTCCACAGCCGTCGTGCCCCGTCTGCGTCGGCGGCTCTGTTCCTCATCCCCCGGTTCTCCTGCATA
AACCCCAAGGTTGAGTTTGAGAGATACGAGGATTGTGAATGGGAGAGGCGGAATTATGAAGAGGAGGAGGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATGG
GATCGATTTGAAGGCGGAGAAGTTTATAAAAATGTTTTATGAGGAAATGAAAATGCAGAGTCAGGTATCGTATTTGCGGTTCGATGAGTTTTCTGATGGTGAAGAGTAA
Protein sequenceShow/hide protein sequence
MSNNTRFFHVRKAWKIILRQWKLHSHRRAFPVDFRPLRRFIKRILHPTPTPLPPHYAERQFSFNDTPIFHLKFHSRRAPSASAALFLIPRFSCINPKVEFERYEDCEWER
RNYEEEEEEEEEEEEEEEEDGIDLKAEKFIKMFYEEMKMQSQVSYLRFDEFSDGEE