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CSPI04G01560 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G01560
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr4:863499..864559
RNA-Seq ExpressionCSPI04G01560
SyntenyCSPI04G01560
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044441.1 hypothetical protein E6C27_scaffold46G001730 [Cucumis melo var. makuwa]2.0e-4179.1Show/hide
Query:  MSSILSSQALVLATAMVVSSTALFLAFSNHHHKMINPTIPPSTSLPPSCFSSDEKKKQRNKKKKKKKVRFAEDVKEPKGNGEEYRREHDEKMGLMEETRR
        MSSILSSQ LV+ATAMVVSSTALFLAFSNHHHKMIN                 EKKKQ    KKKKKVRFAEDVKEPKGNGEEYRREHDEK+GLMEET R
Subjt:  MSSILSSQALVLATAMVVSSTALFLAFSNHHHKMINPTIPPSTSLPPSCFSSDEKKKQRNKKKKKKKVRFAEDVKEPKGNGEEYRREHDEKMGLMEETRR

Query:  RRRRISCRNDVPGNRIALYNGILKDRSQRIQCSF
        R RRISCRND+P NRIALYNGILKDRSQRIQCSF
Subjt:  RRRRISCRNDVPGNRIALYNGILKDRSQRIQCSF

XP_008454240.1 PREDICTED: uncharacterized protein LOC103494703 [Cucumis melo]6.5e-5389.55Show/hide
Query:  MSSILSSQALVLATAMVVSSTALFLAFSNHHHKMINPTIPPSTSLPPSCFSSDEKKKQRNKKKKKKKVRFAEDVKEPKGNGEEYRREHDEKMGLMEETRR
        MSSILSSQ LV+ATAMVVSSTALFLAFSNHHHKMI+P IPPSTSL PSCFSSDEKKKQ    KKKKKVRFAEDVKEPKGNGEEYRREHDEK+GLMEET R
Subjt:  MSSILSSQALVLATAMVVSSTALFLAFSNHHHKMINPTIPPSTSLPPSCFSSDEKKKQRNKKKKKKKVRFAEDVKEPKGNGEEYRREHDEKMGLMEETRR

Query:  RRRRISCRNDVPGNRIALYNGILKDRSQRIQCSF
        R RRISCRND+P NRIALYNGILKDRSQRIQCSF
Subjt:  RRRRISCRNDVPGNRIALYNGILKDRSQRIQCSF

XP_011652971.1 uncharacterized protein LOC101211217 [Cucumis sativus]5.5e-6098.51Show/hide
Query:  MSSILSSQALVLATAMVVSSTALFLAFSNHHHKMINPTIPPSTSLPPSCFSSDEKKKQRNKKKKKKKVRFAEDVKEPKGNGEEYRREHDEKMGLMEETRR
        MSSILSSQALVLATAMVVSSTALFLAFSNHHHKMINPTIPPSTSLPP CFSSDEKKKQRNKKKKKKKVRFAEDVKEPKGNGEEYRREHDEKMGLMEET R
Subjt:  MSSILSSQALVLATAMVVSSTALFLAFSNHHHKMINPTIPPSTSLPPSCFSSDEKKKQRNKKKKKKKVRFAEDVKEPKGNGEEYRREHDEKMGLMEETRR

Query:  RRRRISCRNDVPGNRIALYNGILKDRSQRIQCSF
        RRRRISCRNDVPGNRIALYNGILKDRSQRIQCSF
Subjt:  RRRRISCRNDVPGNRIALYNGILKDRSQRIQCSF

XP_023528178.1 uncharacterized protein LOC111791169 [Cucurbita pepo subsp. pepo]1.3e-3774.07Show/hide
Query:  MSSILSSQALVLATAMVVSSTALFLAFSNHHHKMINPTIPPSTSLPPSCFSSDEKKKQRNKKKKKKKVRFAEDVKEPKGNGEEYRREHDEKMGLMEETRR
        MSSIL+SQ LV+ATAMVVSSTALFLAFSNHH   INP   PS SL  SCFSSD+KKK   KKKKKKKVRFAEDVKEPKGNGEEYRREHDE++ + E  RR
Subjt:  MSSILSSQALVLATAMVVSSTALFLAFSNHHHKMINPTIPPSTSLPPSCFSSDEKKKQRNKKKKKKKVRFAEDVKEPKGNGEEYRREHDEKMGLMEETRR

Query:  RRRRIS-CRNDVPGNRIALYNGILKDRSQRIQCSF
         R   S CRN++P NR+ALYNGILK RS R QCSF
Subjt:  RRRRIS-CRNDVPGNRIALYNGILKDRSQRIQCSF

XP_038901306.1 uncharacterized protein LOC120088227 [Benincasa hispida]2.1e-4378.52Show/hide
Query:  MSSILSSQALVLATAMVVSSTALFLAFSNHHHKMINPTIPPSTSLPPSCFSSDEKKKQRNK-KKKKKKVRFAEDVKEPKGNGEEYRREHDEKMGLMEETR
        MSSILSSQ LV+ATAMVVSSTALFLAFSNHH   INP I PS SL PSCFSSDEKKK++ K ++KKKKVRFAEDVKEPKGNGEEYRREHDEKMG+ E   
Subjt:  MSSILSSQALVLATAMVVSSTALFLAFSNHHHKMINPTIPPSTSLPPSCFSSDEKKKQRNK-KKKKKKVRFAEDVKEPKGNGEEYRREHDEKMGLMEETR

Query:  RRRRRISCRNDVPGNRIALYNGILKDRSQRIQCSF
         R R  +CRN++P NR+ALYNGILKDRSQRIQCSF
Subjt:  RRRRRISCRNDVPGNRIALYNGILKDRSQRIQCSF

TrEMBL top hitse value%identityAlignment
A0A0A0KVF6 Uncharacterized protein2.6e-6098.51Show/hide
Query:  MSSILSSQALVLATAMVVSSTALFLAFSNHHHKMINPTIPPSTSLPPSCFSSDEKKKQRNKKKKKKKVRFAEDVKEPKGNGEEYRREHDEKMGLMEETRR
        MSSILSSQALVLATAMVVSSTALFLAFSNHHHKMINPTIPPSTSLPP CFSSDEKKKQRNKKKKKKKVRFAEDVKEPKGNGEEYRREHDEKMGLMEET R
Subjt:  MSSILSSQALVLATAMVVSSTALFLAFSNHHHKMINPTIPPSTSLPPSCFSSDEKKKQRNKKKKKKKVRFAEDVKEPKGNGEEYRREHDEKMGLMEETRR

Query:  RRRRISCRNDVPGNRIALYNGILKDRSQRIQCSF
        RRRRISCRNDVPGNRIALYNGILKDRSQRIQCSF
Subjt:  RRRRISCRNDVPGNRIALYNGILKDRSQRIQCSF

A0A1S3BY99 uncharacterized protein LOC1034947033.1e-5389.55Show/hide
Query:  MSSILSSQALVLATAMVVSSTALFLAFSNHHHKMINPTIPPSTSLPPSCFSSDEKKKQRNKKKKKKKVRFAEDVKEPKGNGEEYRREHDEKMGLMEETRR
        MSSILSSQ LV+ATAMVVSSTALFLAFSNHHHKMI+P IPPSTSL PSCFSSDEKKKQ    KKKKKVRFAEDVKEPKGNGEEYRREHDEK+GLMEET R
Subjt:  MSSILSSQALVLATAMVVSSTALFLAFSNHHHKMINPTIPPSTSLPPSCFSSDEKKKQRNKKKKKKKVRFAEDVKEPKGNGEEYRREHDEKMGLMEETRR

Query:  RRRRISCRNDVPGNRIALYNGILKDRSQRIQCSF
        R RRISCRND+P NRIALYNGILKDRSQRIQCSF
Subjt:  RRRRISCRNDVPGNRIALYNGILKDRSQRIQCSF

A0A5D3E1D5 Uncharacterized protein9.5e-4279.1Show/hide
Query:  MSSILSSQALVLATAMVVSSTALFLAFSNHHHKMINPTIPPSTSLPPSCFSSDEKKKQRNKKKKKKKVRFAEDVKEPKGNGEEYRREHDEKMGLMEETRR
        MSSILSSQ LV+ATAMVVSSTALFLAFSNHHHKMIN                 EKKKQ    KKKKKVRFAEDVKEPKGNGEEYRREHDEK+GLMEET R
Subjt:  MSSILSSQALVLATAMVVSSTALFLAFSNHHHKMINPTIPPSTSLPPSCFSSDEKKKQRNKKKKKKKVRFAEDVKEPKGNGEEYRREHDEKMGLMEETRR

Query:  RRRRISCRNDVPGNRIALYNGILKDRSQRIQCSF
        R RRISCRND+P NRIALYNGILKDRSQRIQCSF
Subjt:  RRRRISCRNDVPGNRIALYNGILKDRSQRIQCSF

A0A6J1DI03 uncharacterized protein LOC1110210942.7e-3671.64Show/hide
Query:  MSSILSSQALVLATAMVVSSTALFLAFSNHHHKMINPTIPPSTSLPPSCFSSDEKKKQRNKKKKKKKVRFAEDVKEPKGNGEEYRREHDEKMGLMEETRR
        MSSILSSQ LV+ATAMVVS+TALFLAFS    K     +P S SL  SCFSSD+K K + KKKKKKKVRFAEDVKEP GNGEEYR+EHDEK+  M E R 
Subjt:  MSSILSSQALVLATAMVVSSTALFLAFSNHHHKMINPTIPPSTSLPPSCFSSDEKKKQRNKKKKKKKVRFAEDVKEPKGNGEEYRREHDEKMGLMEETRR

Query:  RRRRISCRNDVPGNRIALYNGILKDRSQRIQCSF
        RRRRISCRN +P NR+ALYNGILK RS R++CSF
Subjt:  RRRRISCRNDVPGNRIALYNGILKDRSQRIQCSF

A0A6J1GVB7 uncharacterized protein LOC1114577562.7e-3672.39Show/hide
Query:  MSSILSSQALVLATAMVVSSTALFLAFSNHHHKMINPTIPPSTSLPPSCFSSDEKKKQRNKKKKKKKVRFAEDVKEPKGNGEEYRREHDEKMGLMEETRR
        MSSIL+SQ LV+ATAMVVSSTALFLAFS HH   INP   PS SL  SCFSSDEK K++ KKKKKKKVRFAEDVKEPKGNGEEYRREHDE++ + E   R
Subjt:  MSSILSSQALVLATAMVVSSTALFLAFSNHHHKMINPTIPPSTSLPPSCFSSDEKKKQRNKKKKKKKVRFAEDVKEPKGNGEEYRREHDEKMGLMEETRR

Query:  RRRRISCRNDVPGNRIALYNGILKDRSQRIQCSF
        R     CRN++P NR+ALYNGILK RS R QCSF
Subjt:  RRRRISCRNDVPGNRIALYNGILKDRSQRIQCSF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G52565.1 unknown protein5.1e-2453.33Show/hide
Query:  MSSILS-SQALVLATAMVVSSTALFLAFSNHHHKMINPTIPPSTSLPPSCFSSDEKKKQRNKKKKKKKVRFAEDVKEPKGNGEEYRREHDEKMGLMEETR
        M+ ILS S  +V+ATAMV SSTALFLA S    +  +        +  SC SS+EKKKQR  K KKKKV+FAE+VKE KGNGEEYR++   ++   +  +
Subjt:  MSSILS-SQALVLATAMVVSSTALFLAFSNHHHKMINPTIPPSTSLPPSCFSSDEKKKQRNKKKKKKKVRFAEDVKEPKGNGEEYRREHDEKMGLMEETR

Query:  RRRRRISCRNDVPGNRIALYNGILKDRSQRIQCSF
          +    CRND+P NRIALYNGIL+DR  RIQCS+
Subjt:  RRRRRISCRNDVPGNRIALYNGILKDRSQRIQCSF

AT3G15760.1 unknown protein1.9e-1850Show/hide
Query:  SSQALVLATAMVVSSTALFLAFSNHHH-KMINPTIPPSTSLP--PSCFSSDEKKKQRNKKKKKKKVRFAEDVKEPKGNGEEY-RREHDEKMGLMEETRRR
        S+  +V+ATAMV SSTALFLA +   H    NP +   T  P   SC SS+E KKQ    KK KKVRFA++VK+ KGNGEEY RRE + K      T+  
Subjt:  SSQALVLATAMVVSSTALFLAFSNHHH-KMINPTIPPSTSLP--PSCFSSDEKKKQRNKKKKKKKVRFAEDVKEPKGNGEEY-RREHDEKMGLMEETRRR

Query:  RRRISCR-NDVPGNRIALYNGILKDRSQRIQCSF
        +    CR + +P NR+ALYNGIL+DR  R+Q S+
Subjt:  RRRISCR-NDVPGNRIALYNGILKDRSQRIQCSF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCCATTCTCAGTTCTCAAGCTCTCGTCCTTGCCACAGCCATGGTCGTCTCTTCCACAGCTCTCTTTCTCGCCTTCTCCAACCACCATCACAAGATGATCAATCC
AACAATCCCACCCTCCACATCCCTTCCTCCTTCTTGCTTTTCATCTGATGAAAAGAAGAAACAGAGGAATAAGAAGAAGAAGAAGAAGAAGGTGAGATTTGCAGAGGATG
TGAAAGAACCAAAAGGGAATGGAGAAGAGTATAGAAGAGAACATGATGAGAAAATGGGTTTAATGGAGGAAACCAGAAGAAGAAGAAGAAGAATAAGTTGTAGAAATGAT
GTTCCTGGTAATCGAATTGCTTTGTATAATGGAATTCTTAAAGATCGATCGCAAAGGATTCAATGTTCGTTTTGA
mRNA sequenceShow/hide mRNA sequence
TGTATGTATGGTGAGAGATTAGTACAAGTTCTGAAGTTTTGAGTTCATAAATGGAGGTGGTGGAGGAGGAGAAGAGATGTATTAAATGTTGTCAACTAGATTAGGATAGT
CATAGTCCATTAATTTAGAGTCAAACTTTCTCTCTCCTTCTCTCTAGAGAAGCGTAGATGGCCACCCATATAAAAATCTTCCATCTCCTTCCTCTCCCACTTGCCAACTA
AACAAAATAACTTTCCTTTCCCAAATCTCAACTTCAAAACACACAACAACAGGAACAAGGCCAATTTCAAGAGAATAATCAACTCAACTTGAAGCTTCCTTTCAATCCTC
CCCCATGTCTTCCATTCTCAGTTCTCAAGCTCTCGTCCTTGCCACAGCCATGGTCGTCTCTTCCACAGCTCTCTTTCTCGCCTTCTCCAACCACCATCACAAGATGATCA
ATCCAACAATCCCACCCTCCACATCCCTTCCTCCTTCTTGCTTTTCATCTGATGAAAAGAAGAAACAGAGGAATAAGAAGAAGAAGAAGAAGAAGGTGAGATTTGCAGAG
GATGTGAAAGAACCAAAAGGGAATGGAGAAGAGTATAGAAGAGAACATGATGAGAAAATGGGTTTAATGGAGGAAACCAGAAGAAGAAGAAGAAGAATAAGTTGTAGAAA
TGATGTTCCTGGTAATCGAATTGCTTTGTATAATGGAATTCTTAAAGATCGATCGCAAAGGATTCAATGTTCGTTTTGATCTTAACTCCATTGCTCTGTTTTCTTCTTCT
TGTTCTCTCTGTGTTAGAAAAATCCAGCCTTTCTGTGGCTGTCAATGGATAGTGGAATTTCTCTTCATCCACTTTTCTTTCTTTCTTTCTTTCTTTTTTTCTTTTGAGAA
AAAGGAGATTATGAATGATGTATAGGAAGCTCTCAATTTTAGAATTTGAATTTCATGTTTTCATATTTGTGTTTGGGTAACAA
Protein sequenceShow/hide protein sequence
MSSILSSQALVLATAMVVSSTALFLAFSNHHHKMINPTIPPSTSLPPSCFSSDEKKKQRNKKKKKKKVRFAEDVKEPKGNGEEYRREHDEKMGLMEETRRRRRRISCRND
VPGNRIALYNGILKDRSQRIQCSF