; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI04G02000 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G02000
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr4:1147027..1149096
RNA-Seq ExpressionCSPI04G02000
SyntenyCSPI04G02000
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004152177.2 uncharacterized protein LOC101209077 isoform X1 [Cucumis sativus]9.6e-7198.62Show/hide
Query:  MAATATATGVLKIGV--PAPAPAPPPLKAKSGRHPTNFASLTMRYPNYFLNTRMKFPAVRALGQGGNPSGDDDNDAGGFINQEDVEFLLKLGAGSIAGGF
        MAATATATGVLKIGV  PAPAPAPPPLKAKSGRHPTNFASLTMRYPNYFLNTRMKFPAVRALGQGGNPSGDDDNDAGGFINQEDVEFLLKLGAGSIAGGF
Subjt:  MAATATATGVLKIGV--PAPAPAPPPLKAKSGRHPTNFASLTMRYPNYFLNTRMKFPAVRALGQGGNPSGDDDNDAGGFINQEDVEFLLKLGAGSIAGGF

Query:  GIKYGSIIFPEITKPNIVQALIMISTPVVVAIWLLIKQSREETQS
        GIKYGSIIFPEITKPNIVQALIMISTPVVVAIWLLIKQSREETQS
Subjt:  GIKYGSIIFPEITKPNIVQALIMISTPVVVAIWLLIKQSREETQS

XP_008454177.1 PREDICTED: uncharacterized protein LOC103494660 [Cucumis melo]3.1e-6188.81Show/hide
Query:  MAATATATGVLKIGVPAPAPAPPPLKAKSGRHPTNFASLTMRYPNYFLNTRMKFPAVRALGQGGNPSGDDDNDAGGFINQEDVEFLLKLGAGSIAGGFGI
        MAATATATGVLK G PA      P+KAKSGRH TNFA LT+RYPNYFLNTRMKFPA+RALGQGG PSG+DDNDAGGFINQEDVEF LKLGAGSIAGGFGI
Subjt:  MAATATATGVLKIGVPAPAPAPPPLKAKSGRHPTNFASLTMRYPNYFLNTRMKFPAVRALGQGGNPSGDDDNDAGGFINQEDVEFLLKLGAGSIAGGFGI

Query:  KYGSIIFPEITKPNIVQALIMISTPVVVAIWLLIKQSREETQS
        KYGSIIFPEITKPNIVQALIMISTPVVVAIWLLIKQSREETQS
Subjt:  KYGSIIFPEITKPNIVQALIMISTPVVVAIWLLIKQSREETQS

XP_022153461.1 uncharacterized protein LOC111020963 [Momordica charantia]2.1e-4169.13Show/hide
Query:  MAAT-ATATGVLKIGVPAPAPAPPPLKAKSGRHPTNFASLTMRYPNYFLNTRMKFPAVRAL-----GQGGNPSGDDDNDAGGFINQEDVEFLLKLGAGSI
        MAAT ATATG LKIG+PAP         K  +  TNF  LT+RYPN  LNT  K  A+RAL     G+GGN SG DD  AG FINQEDV+FLLKL AGSI
Subjt:  MAAT-ATATGVLKIGVPAPAPAPPPLKAKSGRHPTNFASLTMRYPNYFLNTRMKFPAVRAL-----GQGGNPSGDDDNDAGGFINQEDVEFLLKLGAGSI

Query:  AGGFGIKYGSIIFPEITKPNIVQALIMISTPVVVAIWLLIKQSREETQS
        AGG GIKYGSIIFP+I KPN+VQALIMISTPVV+AIWLLIKQSREE QS
Subjt:  AGGFGIKYGSIIFPEITKPNIVQALIMISTPVVVAIWLLIKQSREETQS

XP_022955512.1 uncharacterized protein LOC111457518 isoform X1 [Cucurbita moschata]1.3e-4069.23Show/hide
Query:  MAATATATGVLKIGVPAPAPAPPPLKAKSGRHPTNFASLTMRYPNYFLNTRMKFPAVRALGQGGNPSGDDDNDAGGFINQEDVEFLLKLGAGSIAGGFGI
        MAATA ATG  KIGVPAP  +         + PTNF  LT+RYPN FLNTR K PA+RALGQ GN SG DD D G  I+QEDV+F+LK+ AGSIA G GI
Subjt:  MAATATATGVLKIGVPAPAPAPPPLKAKSGRHPTNFASLTMRYPNYFLNTRMKFPAVRALGQGGNPSGDDDNDAGGFINQEDVEFLLKLGAGSIAGGFGI

Query:  KYGSIIFPEITKPNIVQALIMISTPVVVAIWLLIKQSREETQS
        KYGSIIFPE+TKPNIVQALIM+STPVVVAIWLLI QSR++ QS
Subjt:  KYGSIIFPEITKPNIVQALIMISTPVVVAIWLLIKQSREETQS

XP_038902938.1 uncharacterized protein LOC120089511 [Benincasa hispida]5.3e-5379.02Show/hide
Query:  MAATATATGVLKIGVPAPAPAPPPLKAKSGRHPTNFASLTMRYPNYFLNTRMKFPAVRALGQGGNPSGDDDNDAGGFINQEDVEFLLKLGAGSIAGGFGI
        MAA  T TG LKIG+PAP        AKS + PTNFA LT+RYPN FLNTR+KFPA+RALGQGGNPSG+DD DAGGFINQEDV+FLLKL AGSIAGG GI
Subjt:  MAATATATGVLKIGVPAPAPAPPPLKAKSGRHPTNFASLTMRYPNYFLNTRMKFPAVRALGQGGNPSGDDDNDAGGFINQEDVEFLLKLGAGSIAGGFGI

Query:  KYGSIIFPEITKPNIVQALIMISTPVVVAIWLLIKQSREETQS
        KYGSIIFPE+TKPNIVQALIMIS PVVVAIWLLI QSREE QS
Subjt:  KYGSIIFPEITKPNIVQALIMISTPVVVAIWLLIKQSREETQS

TrEMBL top hitse value%identityAlignment
A0A0A0KWZ3 Uncharacterized protein4.6e-7198.62Show/hide
Query:  MAATATATGVLKIGV--PAPAPAPPPLKAKSGRHPTNFASLTMRYPNYFLNTRMKFPAVRALGQGGNPSGDDDNDAGGFINQEDVEFLLKLGAGSIAGGF
        MAATATATGVLKIGV  PAPAPAPPPLKAKSGRHPTNFASLTMRYPNYFLNTRMKFPAVRALGQGGNPSGDDDNDAGGFINQEDVEFLLKLGAGSIAGGF
Subjt:  MAATATATGVLKIGV--PAPAPAPPPLKAKSGRHPTNFASLTMRYPNYFLNTRMKFPAVRALGQGGNPSGDDDNDAGGFINQEDVEFLLKLGAGSIAGGF

Query:  GIKYGSIIFPEITKPNIVQALIMISTPVVVAIWLLIKQSREETQS
        GIKYGSIIFPEITKPNIVQALIMISTPVVVAIWLLIKQSREETQS
Subjt:  GIKYGSIIFPEITKPNIVQALIMISTPVVVAIWLLIKQSREETQS

A0A1S4E0N1 uncharacterized protein LOC1034946601.5e-6188.81Show/hide
Query:  MAATATATGVLKIGVPAPAPAPPPLKAKSGRHPTNFASLTMRYPNYFLNTRMKFPAVRALGQGGNPSGDDDNDAGGFINQEDVEFLLKLGAGSIAGGFGI
        MAATATATGVLK G PA      P+KAKSGRH TNFA LT+RYPNYFLNTRMKFPA+RALGQGG PSG+DDNDAGGFINQEDVEF LKLGAGSIAGGFGI
Subjt:  MAATATATGVLKIGVPAPAPAPPPLKAKSGRHPTNFASLTMRYPNYFLNTRMKFPAVRALGQGGNPSGDDDNDAGGFINQEDVEFLLKLGAGSIAGGFGI

Query:  KYGSIIFPEITKPNIVQALIMISTPVVVAIWLLIKQSREETQS
        KYGSIIFPEITKPNIVQALIMISTPVVVAIWLLIKQSREETQS
Subjt:  KYGSIIFPEITKPNIVQALIMISTPVVVAIWLLIKQSREETQS

A0A6J1DKQ3 uncharacterized protein LOC1110209631.0e-4169.13Show/hide
Query:  MAAT-ATATGVLKIGVPAPAPAPPPLKAKSGRHPTNFASLTMRYPNYFLNTRMKFPAVRAL-----GQGGNPSGDDDNDAGGFINQEDVEFLLKLGAGSI
        MAAT ATATG LKIG+PAP         K  +  TNF  LT+RYPN  LNT  K  A+RAL     G+GGN SG DD  AG FINQEDV+FLLKL AGSI
Subjt:  MAAT-ATATGVLKIGVPAPAPAPPPLKAKSGRHPTNFASLTMRYPNYFLNTRMKFPAVRAL-----GQGGNPSGDDDNDAGGFINQEDVEFLLKLGAGSI

Query:  AGGFGIKYGSIIFPEITKPNIVQALIMISTPVVVAIWLLIKQSREETQS
        AGG GIKYGSIIFP+I KPN+VQALIMISTPVV+AIWLLIKQSREE QS
Subjt:  AGGFGIKYGSIIFPEITKPNIVQALIMISTPVVVAIWLLIKQSREETQS

A0A6J1GTV4 uncharacterized protein LOC111457518 isoform X16.5e-4169.23Show/hide
Query:  MAATATATGVLKIGVPAPAPAPPPLKAKSGRHPTNFASLTMRYPNYFLNTRMKFPAVRALGQGGNPSGDDDNDAGGFINQEDVEFLLKLGAGSIAGGFGI
        MAATA ATG  KIGVPAP  +         + PTNF  LT+RYPN FLNTR K PA+RALGQ GN SG DD D G  I+QEDV+F+LK+ AGSIA G GI
Subjt:  MAATATATGVLKIGVPAPAPAPPPLKAKSGRHPTNFASLTMRYPNYFLNTRMKFPAVRALGQGGNPSGDDDNDAGGFINQEDVEFLLKLGAGSIAGGFGI

Query:  KYGSIIFPEITKPNIVQALIMISTPVVVAIWLLIKQSREETQS
        KYGSIIFPE+TKPNIVQALIM+STPVVVAIWLLI QSR++ QS
Subjt:  KYGSIIFPEITKPNIVQALIMISTPVVVAIWLLIKQSREETQS

A0A6J1GU58 uncharacterized protein LOC111457518 isoform X28.0e-3967.13Show/hide
Query:  MAATATATGVLKIGVPAPAPAPPPLKAKSGRHPTNFASLTMRYPNYFLNTRMKFPAVRALGQGGNPSGDDDNDAGGFINQEDVEFLLKLGAGSIAGGFGI
        MAATA ATG  KIGVPAP  +         + PTNF  LT+RYPN FLNTR K PA+RALGQ GN SG DD D G     +DV+F+LK+ AGSIA G GI
Subjt:  MAATATATGVLKIGVPAPAPAPPPLKAKSGRHPTNFASLTMRYPNYFLNTRMKFPAVRALGQGGNPSGDDDNDAGGFINQEDVEFLLKLGAGSIAGGFGI

Query:  KYGSIIFPEITKPNIVQALIMISTPVVVAIWLLIKQSREETQS
        KYGSIIFPE+TKPNIVQALIM+STPVVVAIWLLI QSR++ QS
Subjt:  KYGSIIFPEITKPNIVQALIMISTPVVVAIWLLIKQSREETQS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G15900.1 unknown protein2.4e-1134.59Show/hide
Query:  VPAPAPAPPPLKAKSGRH----PTNFASL-TMRYPNYFLNTRMKFPAVRALGQGGNPSGDDDNDAGGFINQEDVEFLLKLGAGSIAGGFGIKYGSIIFPE
        VP  A   P L   S  H    PT   ++ ++++   F N        R+     +    +  D G  I QED+ +LLK+G GS+AG   IKYGS++FP+
Subjt:  VPAPAPAPPPLKAKSGRH----PTNFASL-TMRYPNYFLNTRMKFPAVRALGQGGNPSGDDDNDAGGFINQEDVEFLLKLGAGSIAGGFGIKYGSIIFPE

Query:  ITKPNIVQALIMISTPVVVAIWLLIKQSREETQ
        IT+PN+  AL +I  PVV+++ LL   S   ++
Subjt:  ITKPNIVQALIMISTPVVVAIWLLIKQSREETQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCGACGGCGACGGCGACTGGAGTATTGAAGATCGGCGTTCCGGCACCAGCTCCAGCTCCGCCTCCGTTGAAGGCAAAATCAGGAAGGCATCCAACGAATTTTGC
AAGCCTCACAATGCGCTATCCAAATTACTTTCTCAATACGCGGATGAAATTTCCTGCCGTTCGAGCACTTGGACAAGGAGGGAATCCGAGCGGCGACGACGACAACGACG
CCGGCGGTTTCATCAATCAGGAGGATGTGGAATTTTTGTTGAAACTGGGGGCAGGTTCCATAGCAGGGGGATTTGGAATAAAGTATGGAAGCATAATATTTCCAGAGATA
ACCAAACCCAACATTGTACAAGCACTTATCATGATATCAACTCCTGTGGTTGTAGCAATATGGCTTTTGATCAAGCAAAGTCGTGAAGAGACACAAAGCTAA
mRNA sequenceShow/hide mRNA sequence
GCGGTGGCCGTTAAAAGAGAGAGATAATAGAGCAAAATGGCAGCGACGGCGACGGCGACTGGAGTATTGAAGATCGGCGTTCCGGCACCAGCTCCAGCTCCGCCTCCGTT
GAAGGCAAAATCAGGAAGGCATCCAACGAATTTTGCAAGCCTCACAATGCGCTATCCAAATTACTTTCTCAATACGCGGATGAAATTTCCTGCCGTTCGAGCACTTGGAC
AAGGAGGGAATCCGAGCGGCGACGACGACAACGACGCCGGCGGTTTCATCAATCAGGAGGATGTGGAATTTTTGTTGAAACTGGGGGCAGGTTCCATAGCAGGGGGATTT
GGAATAAAGTATGGAAGCATAATATTTCCAGAGATAACCAAACCCAACATTGTACAAGCACTTATCATGATATCAACTCCTGTGGTTGTAGCAATATGGCTTTTGATCAA
GCAAAGTCGTGAAGAGACACAAAGCTAACGATCCACTGTCGTTTTTACAAGATGATGAAAGGATTTTAACCATCCAAAAATTTGTAAAAGAAAAAAAAGTTAGAACTTGT
AAAAGCACTAGAAATTGAAAACAGATGAAACACTTCATATTTTTGTGTTGCTCGATAATCTTCATTGTATAAGTTGACATTAAGAATAGAAATCATGCCTTACACTATTC
ATATTGCTCGGAC
Protein sequenceShow/hide protein sequence
MAATATATGVLKIGVPAPAPAPPPLKAKSGRHPTNFASLTMRYPNYFLNTRMKFPAVRALGQGGNPSGDDDNDAGGFINQEDVEFLLKLGAGSIAGGFGIKYGSIIFPEI
TKPNIVQALIMISTPVVVAIWLLIKQSREETQS