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CSPI04G02090 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G02090
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionTransmembrane protein
Genome locationChr4:1200617..1203160
RNA-Seq ExpressionCSPI04G02090
SyntenyCSPI04G02090
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044487.1 putative transmembrane protein [Cucumis melo var. makuwa]2.2e-5293.22Show/hide
Query:  MEEDDDPWLAPDKFYHFLLCFSLTILFASFALHTRYPFIRRHSILIGSVLSLFAGAAKEVADELGFFKSAGASTRDAVADFIGVLIASFLLHALRFSIRS
        MEEDDDPWLAPDK YHFLLCFSLTILFASFALHTRYPFIRRHSILIGSVLSL AGAAKEVADELGFFKSAGASTRDAVAD IGVL+ASFLLHALRFSIRS
Subjt:  MEEDDDPWLAPDKFYHFLLCFSLTILFASFALHTRYPFIRRHSILIGSVLSLFAGAAKEVADELGFFKSAGASTRDAVADFIGVLIASFLLHALRFSIRS

Query:  GGGGGGKEACPNRDILMV
           GG KEACPNRDILMV
Subjt:  GGGGGGKEACPNRDILMV
KAE8649070.1 hypothetical protein Csa_014719 [Cucumis sativus]2.4e-59100Show/hide
Query:  MEEDDDPWLAPDKFYHFLLCFSLTILFASFALHTRYPFIRRHSILIGSVLSLFAGAAKEVADELGFFKSAGASTRDAVADFIGVLIASFLLHALRFSIRS
        MEEDDDPWLAPDKFYHFLLCFSLTILFASFALHTRYPFIRRHSILIGSVLSLFAGAAKEVADELGFFKSAGASTRDAVADFIGVLIASFLLHALRFSIRS
Subjt:  MEEDDDPWLAPDKFYHFLLCFSLTILFASFALHTRYPFIRRHSILIGSVLSLFAGAAKEVADELGFFKSAGASTRDAVADFIGVLIASFLLHALRFSIRS

Query:  GGGGGGKEACPNRDILMV
        GGGGGGKEACPNRDILMV
Subjt:  GGGGGGKEACPNRDILMV
XP_008454165.1 PREDICTED: uncharacterized protein LOC103494650 [Cucumis melo]2.2e-5293.22Show/hide
Query:  MEEDDDPWLAPDKFYHFLLCFSLTILFASFALHTRYPFIRRHSILIGSVLSLFAGAAKEVADELGFFKSAGASTRDAVADFIGVLIASFLLHALRFSIRS
        MEEDDDPWLAPDK YHFLLCFSLTILFASFALHTRYPFIRRHSILIGSVLSL AGAAKEVADELGFFKSAGASTRDAVAD IGVL+ASFLLHALRFSIRS
Subjt:  MEEDDDPWLAPDKFYHFLLCFSLTILFASFALHTRYPFIRRHSILIGSVLSLFAGAAKEVADELGFFKSAGASTRDAVADFIGVLIASFLLHALRFSIRS

Query:  GGGGGGKEACPNRDILMV
           GG KEACPNRDILMV
Subjt:  GGGGGGKEACPNRDILMV
XP_011653000.1 uncharacterized protein LOC105435165 [Cucumis sativus]2.4e-59100Show/hide
Query:  MEEDDDPWLAPDKFYHFLLCFSLTILFASFALHTRYPFIRRHSILIGSVLSLFAGAAKEVADELGFFKSAGASTRDAVADFIGVLIASFLLHALRFSIRS
        MEEDDDPWLAPDKFYHFLLCFSLTILFASFALHTRYPFIRRHSILIGSVLSLFAGAAKEVADELGFFKSAGASTRDAVADFIGVLIASFLLHALRFSIRS
Subjt:  MEEDDDPWLAPDKFYHFLLCFSLTILFASFALHTRYPFIRRHSILIGSVLSLFAGAAKEVADELGFFKSAGASTRDAVADFIGVLIASFLLHALRFSIRS

Query:  GGGGGGKEACPNRDILMV
        GGGGGGKEACPNRDILMV
Subjt:  GGGGGGKEACPNRDILMV
XP_038890690.1 uncharacterized protein LOC120080188 [Benincasa hispida]8.5e-4987.29Show/hide
Query:  MEEDDDPWLAPDKFYHFLLCFSLTILFASFALHTRYPFIRRHSILIGSVLSLFAGAAKEVADELGFFKSAGASTRDAVADFIGVLIASFLLHALRFSIRS
        ME+DDDPWLAPDK YHFLLCF+LTILFAS ALHTRYPFIRRHSILIGSV+SLFAGAAKEVADELGFFKSAGASTRDA+AD IGVLIASFLLH LRFSIRS
Subjt:  MEEDDDPWLAPDKFYHFLLCFSLTILFASFALHTRYPFIRRHSILIGSVLSLFAGAAKEVADELGFFKSAGASTRDAVADFIGVLIASFLLHALRFSIRS

Query:  GGGGGGKEACPNRDILMV
            G KEA P+RDILMV
Subjt:  GGGGGGKEACPNRDILMV
TrEMBL top hitse value%identityAlignment
A0A0A0KYM1 Uncharacterized protein1.2e-59100Show/hide
Query:  MEEDDDPWLAPDKFYHFLLCFSLTILFASFALHTRYPFIRRHSILIGSVLSLFAGAAKEVADELGFFKSAGASTRDAVADFIGVLIASFLLHALRFSIRS
        MEEDDDPWLAPDKFYHFLLCFSLTILFASFALHTRYPFIRRHSILIGSVLSLFAGAAKEVADELGFFKSAGASTRDAVADFIGVLIASFLLHALRFSIRS
Subjt:  MEEDDDPWLAPDKFYHFLLCFSLTILFASFALHTRYPFIRRHSILIGSVLSLFAGAAKEVADELGFFKSAGASTRDAVADFIGVLIASFLLHALRFSIRS

Query:  GGGGGGKEACPNRDILMV
        GGGGGGKEACPNRDILMV
Subjt:  GGGGGGKEACPNRDILMV
A0A1S3BXG6 uncharacterized protein LOC1034946501.0e-5293.22Show/hide
Query:  MEEDDDPWLAPDKFYHFLLCFSLTILFASFALHTRYPFIRRHSILIGSVLSLFAGAAKEVADELGFFKSAGASTRDAVADFIGVLIASFLLHALRFSIRS
        MEEDDDPWLAPDK YHFLLCFSLTILFASFALHTRYPFIRRHSILIGSVLSL AGAAKEVADELGFFKSAGASTRDAVAD IGVL+ASFLLHALRFSIRS
Subjt:  MEEDDDPWLAPDKFYHFLLCFSLTILFASFALHTRYPFIRRHSILIGSVLSLFAGAAKEVADELGFFKSAGASTRDAVADFIGVLIASFLLHALRFSIRS

Query:  GGGGGGKEACPNRDILMV
           GG KEACPNRDILMV
Subjt:  GGGGGGKEACPNRDILMV
A0A5A7TRK6 Putative transmembrane protein1.0e-5293.22Show/hide
Query:  MEEDDDPWLAPDKFYHFLLCFSLTILFASFALHTRYPFIRRHSILIGSVLSLFAGAAKEVADELGFFKSAGASTRDAVADFIGVLIASFLLHALRFSIRS
        MEEDDDPWLAPDK YHFLLCFSLTILFASFALHTRYPFIRRHSILIGSVLSL AGAAKEVADELGFFKSAGASTRDAVAD IGVL+ASFLLHALRFSIRS
Subjt:  MEEDDDPWLAPDKFYHFLLCFSLTILFASFALHTRYPFIRRHSILIGSVLSLFAGAAKEVADELGFFKSAGASTRDAVADFIGVLIASFLLHALRFSIRS

Query:  GGGGGGKEACPNRDILMV
           GG KEACPNRDILMV
Subjt:  GGGGGGKEACPNRDILMV
A0A6J1G9C8 uncharacterized protein LOC1114521361.1e-4682.2Show/hide
Query:  MEEDDDPWLAPDKFYHFLLCFSLTILFASFALHTRYPFIRRHSILIGSVLSLFAGAAKEVADELGFFKSAGASTRDAVADFIGVLIASFLLHALRFSIRS
        M++D+DPW APDK YHFLLCF+LT+ FA+ A  TRYPFIRRHSI+IGSVLSLFAGAAKEVADELGFFKSAGASTRDAVAD +GVLIASF LHALRFSIR 
Subjt:  MEEDDDPWLAPDKFYHFLLCFSLTILFASFALHTRYPFIRRHSILIGSVLSLFAGAAKEVADELGFFKSAGASTRDAVADFIGVLIASFLLHALRFSIRS

Query:  GGGGGGKEACPNRDILMV
           GGGKEA PNRDILMV
Subjt:  GGGGGGKEACPNRDILMV
A0A6J1K872 uncharacterized protein LOC1114925821.6e-4581.36Show/hide
Query:  MEEDDDPWLAPDKFYHFLLCFSLTILFASFALHTRYPFIRRHSILIGSVLSLFAGAAKEVADELGFFKSAGASTRDAVADFIGVLIASFLLHALRFSIRS
        M++D+DPW APDK YHFLLCF+LT+ FA+ A  TR+PFIRRHSI+IGSVLSLFAGAAKEVADELGFFKSAGASTRDAVAD IGVLIASF LHALRF IR 
Subjt:  MEEDDDPWLAPDKFYHFLLCFSLTILFASFALHTRYPFIRRHSILIGSVLSLFAGAAKEVADELGFFKSAGASTRDAVADFIGVLIASFLLHALRFSIRS

Query:  GGGGGGKEACPNRDILMV
           GGGKEA PNRDILMV
Subjt:  GGGGGGKEACPNRDILMV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G15900.1 unknown protein8.3e-2660.67Show/hide
Query:  EDDDPWLAPDKFYHFLLCFSLTILFASFALHTRYPFIRRHSILIGSVLSLFAGAAKEVADELGFFKSAGASTRDAVADFIGVLIASFLL
        + +DPWLA DK YH + CFS++++F++ A  +RY F+RRHSI IGS  SL AGAAKE AD++G F SAGAS RDAVAD IGV+IA+ +L
Subjt:  EDDDPWLAPDKFYHFLLCFSLTILFASFALHTRYPFIRRHSILIGSVLSLFAGAAKEVADELGFFKSAGASTRDAVADFIGVLIASFLL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAAGACGATGATCCATGGTTAGCTCCCGATAAGTTCTACCATTTCCTTCTCTGTTTCTCTCTCACGATCCTCTTCGCTTCATTCGCCCTTCACACCCGCTATCC
ATTCATCCGTCGCCACTCCATTCTCATCGGATCCGTCCTTTCTCTTTTTGCCGGAGCCGCCAAAGAGGTCGCCGACGAACTCGGCTTCTTCAAGTCCGCCGGAGCCTCCA
CCAGGGATGCTGTTGCCGACTTTATCGGCGTCTTGATCGCTTCTTTCCTTCTTCACGCTCTCAGATTCTCGATCCGCAGCGGCGGCGGCGGCGGCGGCAAAGAAGCTTGC
CCTAATCGGGACATTTTAATGGTCTGA
mRNA sequenceShow/hide mRNA sequence
CTTTGGTGCACCAATCTATGGAAAAATTGGGTGTTTGTAATTTGTGAAGTGAGAAACTATCAAACAAAACAGCAAAGCGTTGGACCAAAAAAGTGGGAGCGGGAATGGAG
GAAGACGATGATCCATGGTTAGCTCCCGATAAGTTCTACCATTTCCTTCTCTGTTTCTCTCTCACGATCCTCTTCGCTTCATTCGCCCTTCACACCCGCTATCCATTCAT
CCGTCGCCACTCCATTCTCATCGGATCCGTCCTTTCTCTTTTTGCCGGAGCCGCCAAAGAGGTCGCCGACGAACTCGGCTTCTTCAAGTCCGCCGGAGCCTCCACCAGGG
ATGCTGTTGCCGACTTTATCGGCGTCTTGATCGCTTCTTTCCTTCTTCACGCTCTCAGATTCTCGATCCGCAGCGGCGGCGGCGGCGGCGGCAAAGAAGCTTGCCCTAAT
CGGGACATTTTAATGGTCTGAAATGATATGGGAGGGTTTTCTTTTCTGCTACTGATGGAGGAATGAGTCGACGTTTTACTTTGATCAAAGGTAGGTAGGTTGGGGGATCG
ATCAGTTGTCATCGTCGAAAGCTTGCTGCAGTAGAAGGCAAGCGTGAATCACCATCTTTGTCAGGCAACTTAACTGCAGTGTAGATTCCAGCTCCACACAATGTCCCTAA
TATGGGAGCTGTGAGGTAAATCCATATGGCTTTGAAATTGTTTACTGCAATGGCTGGCCCCAGTGTTCTTACTGGATTCATTGAAGCTCCAGTTGTTTGTCTGTTACATA
ATTAAAATGAAAAGCTTTTTAGTTTGTTTGTTGTTTAATGGAGGTATATAGGGTAACATTTGTTCATAAGATAAGGCTCTAAATTACGGTTTCCTTTCTGAAACAGTAGC
CACTTTGTTCACGTCTACATTTTGAAGAGAAATCTATTACTATGAGTTGG
Protein sequenceShow/hide protein sequence
MEEDDDPWLAPDKFYHFLLCFSLTILFASFALHTRYPFIRRHSILIGSVLSLFAGAAKEVADELGFFKSAGASTRDAVADFIGVLIASFLLHALRFSIRSGGGGGGKEAC
PNRDILMV