; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI04G02150 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G02150
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description50S ribosomal protein L18
Genome locationChr4:1244124..1246511
RNA-Seq ExpressionCSPI04G02150
SyntenyCSPI04G02150
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0008097 - 5S rRNA binding (molecular function)
InterPro domainsIPR005484 - Ribosomal protein L18


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK06187.1 50S ribosomal protein L18 [Cucumis melo var. makuwa]9.0e-6095.35Show/hide
Query:  MTLLKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIW
        MT+LKRYVLRLF+SLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADI KEIEKKGF+N TKIW
Subjt:  MTLLKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIW

Query:  AIVNSLKNNGVKLILDNNVDDNAAQSNYQ
        AIVNSLKNNGVKLILDNNVDD+AAQSNYQ
Subjt:  AIVNSLKNNGVKLILDNNVDDNAAQSNYQ
XP_011653002.1 uncharacterized protein LOC101206481 [Cucumis sativus]8.7e-63100Show/hide
Query:  MTLLKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIW
        MTLLKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIW
Subjt:  MTLLKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIW

Query:  AIVNSLKNNGVKLILDNNVDDNAAQSNYQ
        AIVNSLKNNGVKLILDNNVDDNAAQSNYQ
Subjt:  AIVNSLKNNGVKLILDNNVDDNAAQSNYQ
XP_016902998.1 PREDICTED: uncharacterized protein LOC103501501 [Cucumis melo]3.4e-5994.57Show/hide
Query:  MTLLKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIW
        MT+LKRYVLRLF+SLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADI KEIEKKGF+N TKIW
Subjt:  MTLLKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIW

Query:  AIVNSLKNNGVKLILDNNVDDNAAQSNYQ
        AIVNSLKNNGVKLIL+NNVDD+AAQSNYQ
Subjt:  AIVNSLKNNGVKLILDNNVDDNAAQSNYQ
XP_022943852.1 uncharacterized protein LOC111448460 [Cucurbita moschata]5.6e-5487.6Show/hide
Query:  MTLLKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIW
        MT+LKRYV+RLF+SLKYITANVVDRNNGR+VATASTVEHSIK SLECGRSCNAKAAA+VGEVLAMRLKVDGLEQGQGRGIH DI KEIEKKGFKN TKIW
Subjt:  MTLLKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIW

Query:  AIVNSLKNNGVKLILDNNVDDNAAQSNYQ
        AIVNSLKNNGVKLILDNN DD+A++ +Y+
Subjt:  AIVNSLKNNGVKLILDNNVDDNAAQSNYQ
XP_038901007.1 uncharacterized protein LOC120088052 [Benincasa hispida]6.0e-5689.92Show/hide
Query:  MTLLKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIW
        MT+LKRYVLRLF+SLKYITANVVDRNNGR+VATASTVEHSIK SLECGRSCNAKAAA+VGEVLAMRLKVDGLEQGQGRGIHAD+ KEIEKKGFKN TKIW
Subjt:  MTLLKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIW

Query:  AIVNSLKNNGVKLILDNNVDDNAAQSNYQ
        AIVN+LKNNGVKLILDNNVDD A++S+YQ
Subjt:  AIVNSLKNNGVKLILDNNVDDNAAQSNYQ
TrEMBL top hitse value%identityAlignment
A0A0A0KX15 Uncharacterized protein4.2e-63100Show/hide
Query:  MTLLKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIW
        MTLLKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIW
Subjt:  MTLLKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIW

Query:  AIVNSLKNNGVKLILDNNVDDNAAQSNYQ
        AIVNSLKNNGVKLILDNNVDDNAAQSNYQ
Subjt:  AIVNSLKNNGVKLILDNNVDDNAAQSNYQ
A0A1S4E442 uncharacterized protein LOC1035015011.7e-5994.57Show/hide
Query:  MTLLKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIW
        MT+LKRYVLRLF+SLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADI KEIEKKGF+N TKIW
Subjt:  MTLLKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIW

Query:  AIVNSLKNNGVKLILDNNVDDNAAQSNYQ
        AIVNSLKNNGVKLIL+NNVDD+AAQSNYQ
Subjt:  AIVNSLKNNGVKLILDNNVDDNAAQSNYQ
A0A5A7SM55 50S ribosomal protein L181.7e-5994.57Show/hide
Query:  MTLLKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIW
        MT+LKRYVLRLF+SLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADI KEIEKKGF+N TKIW
Subjt:  MTLLKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIW

Query:  AIVNSLKNNGVKLILDNNVDDNAAQSNYQ
        AIVNSLKNNGVKLIL+NNVDD+AAQSNYQ
Subjt:  AIVNSLKNNGVKLILDNNVDDNAAQSNYQ
A0A5D3C2Z2 50S ribosomal protein L184.3e-6095.35Show/hide
Query:  MTLLKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIW
        MT+LKRYVLRLF+SLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADI KEIEKKGF+N TKIW
Subjt:  MTLLKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIW

Query:  AIVNSLKNNGVKLILDNNVDDNAAQSNYQ
        AIVNSLKNNGVKLILDNNVDD+AAQSNYQ
Subjt:  AIVNSLKNNGVKLILDNNVDDNAAQSNYQ
A0A6J1FXG0 uncharacterized protein LOC1114484602.7e-5487.6Show/hide
Query:  MTLLKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIW
        MT+LKRYV+RLF+SLKYITANVVDRNNGR+VATASTVEHSIK SLECGRSCNAKAAA+VGEVLAMRLKVDGLEQGQGRGIH DI KEIEKKGFKN TKIW
Subjt:  MTLLKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIW

Query:  AIVNSLKNNGVKLILDNNVDDNAAQSNYQ
        AIVNSLKNNGVKLILDNN DD+A++ +Y+
Subjt:  AIVNSLKNNGVKLILDNNVDDNAAQSNYQ
SwissProt top hitse value%identityAlignment
A1KRI9 50S ribosomal protein L181.0e-0532.41Show/hide
Query:  LKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIWAIV
        LK   L +F S  +I A V+     +V+A AST+E  ++ SL+ G   N +AAAIVG+ +A + K  G+E           K   ++ GF+ H ++ A+ 
Subjt:  LKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIWAIV

Query:  NSLKNNGV
         + + NG+
Subjt:  NSLKNNGV
A9M3V0 50S ribosomal protein L181.0e-0532.41Show/hide
Query:  LKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIWAIV
        LK   L +F S  +I A V+     +V+A AST+E  ++ SL+ G   N +AAAIVG+ +A + K  G+E           K   ++ GF+ H ++ A+ 
Subjt:  LKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIWAIV

Query:  NSLKNNGV
         + + NG+
Subjt:  NSLKNNGV
Q5F5U3 50S ribosomal protein L181.0e-0532.41Show/hide
Query:  LKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIWAIV
        LK   L +F S  +I A V+     +V+A AST+E  ++ SL+ G   N +AAAIVG+ +A + K  G+E           K   ++ GF+ H ++ A+ 
Subjt:  LKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIWAIV

Query:  NSLKNNGV
         + + NG+
Subjt:  NSLKNNGV
Q7DDT0 50S ribosomal protein L181.0e-0532.41Show/hide
Query:  LKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIWAIV
        LK   L +F S  +I A V+     +V+A AST+E  ++ SL+ G   N +AAAIVG+ +A + K  G+E           K   ++ GF+ H ++ A+ 
Subjt:  LKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIWAIV

Query:  NSLKNNGV
         + + NG+
Subjt:  NSLKNNGV
Q9JQQ6 50S ribosomal protein L181.0e-0532.41Show/hide
Query:  LKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIWAIV
        LK   L +F S  +I A V+     +V+A AST+E  ++ SL+ G   N +AAAIVG+ +A + K  G+E           K   ++ GF+ H ++ A+ 
Subjt:  LKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIWAIV

Query:  NSLKNNGV
         + + NG+
Subjt:  NSLKNNGV
Arabidopsis top hitse value%identityAlignment
AT3G45020.1 Ribosomal L18p/L5e family protein1.3e-5381.97Show/hide
Query:  MTLLKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIW
        MT+LKRYVLRLF+S+KYITANVVDRNNGR+V TASTVEH+IKNSLECGR+CNAKAAAIVGEVLAMRLKV+GL+ GQGRGIHAD+KKEIEKKGFK+ TK+W
Subjt:  MTLLKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIW

Query:  AIVNSLKNNGVKLILDNNVDDN
        A++NSL+NNGV LILD++ DD+
Subjt:  AIVNSLKNNGVKLILDNNVDDN
AT5G27820.1 Ribosomal L18p/L5e family protein8.8e-0527.03Show/hide
Query:  LKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIWAIV
        LK YVL++  + K++ A V+      V  +AS+ E +++ +++  R  +  AA+ +G++L  RL +  +       +   +KKE      + H K+ A++
Subjt:  LKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIWAIV

Query:  NSLKNNGVKLI
        +S++  GVKL+
Subjt:  NSLKNNGVKLI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGCTATTAAAGCGCTATGTGTTGCGATTATTCTTATCTTTGAAGTACATAACAGCGAATGTGGTAGATAGAAACAATGGACGAGTTGTTGCAACTGCATCCACAGT
GGAACACTCCATAAAAAACTCACTTGAATGTGGCCGGTCTTGTAATGCTAAGGCAGCAGCAATTGTTGGAGAGGTGTTGGCTATGCGACTCAAAGTTGATGGTCTCGAAC
AGGGGCAAGGAAGAGGGATTCACGCAGACATAAAAAAAGAAATTGAGAAGAAAGGCTTCAAAAACCACACAAAAATCTGGGCTATAGTGAACTCACTAAAGAATAACGGA
GTTAAACTCATTCTCGACAACAATGTCGACGACAATGCAGCTCAATCGAACTATCAATAA
mRNA sequenceShow/hide mRNA sequence
AAAAATAAAAGACGGATTTCTACTTCTTTGTCTCTCTTCCTCTTCTTCCCTTTTCCTTCTTCTCCTCCACGGCGGCGTAGTGCTGTGTGGTGACGGCGAGATTAGCGACG
ATTTGTTGTTTCTGCTTCTGCTTCTGCAAGCAATCGGCTGTCAGGGATTTACTGTGGCTGTGAAAACTGGTTTGACAAAGGATTTGGGTGTTCATCCTATAGCGGCTGAA
GAATTTGTCACCATGCGAACTCCTACAAGGGAGATTCGTAGAAATCCTGAGGAGAAGTCAGAATCTGAGGCTAAAGATGCAGCAGGGGTATAAAACGGATGCAAGCTTAA
TCAATTTGTAATTCGAAAACTTTAGTCAGTCCTTTCAGATAGGTAACAGGGATTTTGAGAAAATCGCTGCTGGGAATGACGCTATTAAAGCGCTATGTGTTGCGATTATT
CTTATCTTTGAAGTACATAACAGCGAATGTGGTAGATAGAAACAATGGACGAGTTGTTGCAACTGCATCCACAGTGGAACACTCCATAAAAAACTCACTTGAATGTGGCC
GGTCTTGTAATGCTAAGGCAGCAGCAATTGTTGGAGAGGTGTTGGCTATGCGACTCAAAGTTGATGGTCTCGAACAGGGGCAAGGAAGAGGGATTCACGCAGACATAAAA
AAAGAAATTGAGAAGAAAGGCTTCAAAAACCACACAAAAATCTGGGCTATAGTGAACTCACTAAAGAATAACGGAGTTAAACTCATTCTCGACAACAATGTCGACGACAA
TGCAGCTCAATCGAACTATCAATAAGCATCGAAAAGCGATCTTATTGTCCATCCCTAAGAAAAAAGTGGGTTAGGCTAGAGCTCAACCATCATGGAAGACTAGATGCTGC
TAAAGTGGAAGGTACTATCTTTATTAAACATCAGTCACTCATGATATTTGGAAGTTTATGAAGCAGAGACAACTTTATATCTCCACTTATAAAATGCTGGCATGTTGATA
TAGTGATACCACAGCCCACTTGGGCTAATGATAATGTTATCACACTAAAATGGCCTTATATGATCATCAAACTCTACACTACTTTCTCCTCTTTCTTCCCGGTTTTTACT
TTGTTTTTTTTTTTTCTCCCTTTTACTGGTTTAAGAGTTGTATAGAGATTAGCTTTTGTTTTCTGGTTTAAGAGGCTGTCGTTTT
Protein sequenceShow/hide protein sequence
MTLLKRYVLRLFLSLKYITANVVDRNNGRVVATASTVEHSIKNSLECGRSCNAKAAAIVGEVLAMRLKVDGLEQGQGRGIHADIKKEIEKKGFKNHTKIWAIVNSLKNNG
VKLILDNNVDDNAAQSNYQ