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CSPI04G02220 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G02220
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionAP2/ERF domain-containing transcription factor
Genome locationChr4:1312852..1313250
RNA-Seq ExpressionCSPI04G02220
SyntenyCSPI04G02220
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR001471 - AP2/ERF domain
IPR016177 - DNA-binding domain superfamily
IPR036955 - AP2/ERF domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EEF28287.1 DNA binding protein, putative [Ricinus communis]4.6e-1942.36Show/hide
Query:  YRGVRKREWGKWTSAIYYPKQGKQKQLWIGSFDTPEMAARTHDVVTYFFRGPKARLNFPQALHPLHTFPSNANVDDIRDLARRAA-----------EGTY
        YRGVRKR+WGKW S I  P  GK+ ++W+GSF+TPEMAA  +DV   +FRG +A+LNFP  +H L   P++ N DDIR  A  AA           EG+ 
Subjt:  YRGVRKREWGKWTSAIYYPKQGKQKQLWIGSFDTPEMAARTHDVVTYFFRGPKARLNFPQALHPLHTFPSNANVDDIRDLARRAA-----------EGTY

Query:  GGGG--------ESSIFGETDVNNVLHAESGVTESELVGERLFM
        GGGG         SS+ G   V         + ES L   +++M
Subjt:  GGGG--------ESSIFGETDVNNVLHAESGVTESELVGERLFM

KAB1210944.1 hypothetical protein CJ030_MR6G019665 [Morella rubra]8.7e-1849.54Show/hide
Query:  MGDRLKKYRGVRKREWGKWTSAIYYPKQGKQKQLWIGSFDTPEMAARTHDVVTYFFRGPKARLNFPQALHPLHTFPSNANVDDIRDLARRA------AEG
        +G     YRGVRKR+WGKW S I  P  GK+ ++W+GSF TPEMAA  +DV  ++FRG +ARLNFP+ ++ L   P++++ DDIR  A  A      AEG
Subjt:  MGDRLKKYRGVRKREWGKWTSAIYYPKQGKQKQLWIGSFDTPEMAARTHDVVTYFFRGPKARLNFPQALHPLHTFPSNANVDDIRDLARRA------AEG

Query:  TYGGGGESS
        T   GG SS
Subjt:  TYGGGGESS

KAE8649074.1 hypothetical protein Csa_023806, partial [Cucumis sativus]1.6e-3572.48Show/hide
Query:  MGDRLKKYRGVRKREWGKWTSAIYYPKQGKQKQLWIGSFDTPEMAARTHDVVTYFFRGPKARLNFPQALHPLHTFPSNANVDDIRDLARRAAEGTYGGGG
        MGD LK+YRGVRKR WGK TSAIYYPKQGKQKQLWIGSFDTPEMAA  +D V  FF GPKARLNFP+  H L  FP +A V  IR LAR AAEG++GGGG
Subjt:  MGDRLKKYRGVRKREWGKWTSAIYYPKQGKQKQLWIGSFDTPEMAARTHDVVTYFFRGPKARLNFPQALHPLHTFPSNANVDDIRDLARRAAEGTYGGGG

Query:  ESSIFGETD
         SSI G T+
Subjt:  ESSIFGETD

XP_002534096.2 ethylene-responsive transcription factor ERF021 [Ricinus communis]4.6e-1942.36Show/hide
Query:  YRGVRKREWGKWTSAIYYPKQGKQKQLWIGSFDTPEMAARTHDVVTYFFRGPKARLNFPQALHPLHTFPSNANVDDIRDLARRAA-----------EGTY
        YRGVRKR+WGKW S I  P  GK+ ++W+GSF+TPEMAA  +DV   +FRG +A+LNFP  +H L   P++ N DDIR  A  AA           EG+ 
Subjt:  YRGVRKREWGKWTSAIYYPKQGKQKQLWIGSFDTPEMAARTHDVVTYFFRGPKARLNFPQALHPLHTFPSNANVDDIRDLARRAA-----------EGTY

Query:  GGGG--------ESSIFGETDVNNVLHAESGVTESELVGERLFM
        GGGG         SS+ G   V         + ES L   +++M
Subjt:  GGGG--------ESSIFGETDVNNVLHAESGVTESELVGERLFM

XP_004152323.1 ethylene-responsive transcription factor ERF021 [Cucumis sativus]1.6e-3572.48Show/hide
Query:  MGDRLKKYRGVRKREWGKWTSAIYYPKQGKQKQLWIGSFDTPEMAARTHDVVTYFFRGPKARLNFPQALHPLHTFPSNANVDDIRDLARRAAEGTYGGGG
        MGD LK+YRGVRKR WGK TSAIYYPKQGKQKQLWIGSFDTPEMAA  +D V  FF GPKARLNFP+  H L  FP +A V  IR LAR AAEG++GGGG
Subjt:  MGDRLKKYRGVRKREWGKWTSAIYYPKQGKQKQLWIGSFDTPEMAARTHDVVTYFFRGPKARLNFPQALHPLHTFPSNANVDDIRDLARRAAEGTYGGGG

Query:  ESSIFGETD
         SSI G T+
Subjt:  ESSIFGETD

TrEMBL top hitse value%identityAlignment
A0A0A0KTL4 AP2/ERF domain-containing protein7.6e-3672.48Show/hide
Query:  MGDRLKKYRGVRKREWGKWTSAIYYPKQGKQKQLWIGSFDTPEMAARTHDVVTYFFRGPKARLNFPQALHPLHTFPSNANVDDIRDLARRAAEGTYGGGG
        MGD LK+YRGVRKR WGK TSAIYYPKQGKQKQLWIGSFDTPEMAA  +D V  FF GPKARLNFP+  H L  FP +A V  IR LAR AAEG++GGGG
Subjt:  MGDRLKKYRGVRKREWGKWTSAIYYPKQGKQKQLWIGSFDTPEMAARTHDVVTYFFRGPKARLNFPQALHPLHTFPSNANVDDIRDLARRAAEGTYGGGG

Query:  ESSIFGETD
         SSI G T+
Subjt:  ESSIFGETD

A0A2C9U2R9 AP2/ERF domain-containing protein2.1e-1749.09Show/hide
Query:  GDRLKKYRGVRKREWGKWTSAIYYPKQGKQKQLWIGSFDTPEMAARTHDVVTYFFRGPKARLNFPQALHPLHTFPSNANVDDIRDLARRAA--------E
        G     YRGVRKR+WGKW S I  P  GK+ ++W+GSFDTPEMAA  +DV    FRG +A+LNFP+ ++ L   P ++N +DIR  A  AA        E
Subjt:  GDRLKKYRGVRKREWGKWTSAIYYPKQGKQKQLWIGSFDTPEMAARTHDVVTYFFRGPKARLNFPQALHPLHTFPSNANVDDIRDLARRAA--------E

Query:  GTYGGGGESS
           GGGG SS
Subjt:  GTYGGGGESS

A0A2N9GI64 AP2/ERF domain-containing protein9.4e-1848.6Show/hide
Query:  GDRLKKYRGVRKREWGKWTSAIYYPKQGKQKQLWIGSFDTPEMAARTHDVVTYFFRGPKARLNFPQALHPLHTFPSNANVDDIRDLARRAAEGTYGGGGE
        G     YRGVRKR+WGKW S I  P  GK+ ++W+GSF+TPEMAA  +DV    FRG +ARLNFP+ +H L   P ++N +DIR  A  AA    G  G 
Subjt:  GDRLKKYRGVRKREWGKWTSAIYYPKQGKQKQLWIGSFDTPEMAARTHDVVTYFFRGPKARLNFPQALHPLHTFPSNANVDDIRDLARRAAEGTYGGGGE

Query:  SSIFGET
        + I G +
Subjt:  SSIFGET

A0A6A1VDU2 AP2/ERF domain-containing protein4.2e-1849.54Show/hide
Query:  MGDRLKKYRGVRKREWGKWTSAIYYPKQGKQKQLWIGSFDTPEMAARTHDVVTYFFRGPKARLNFPQALHPLHTFPSNANVDDIRDLARRA------AEG
        +G     YRGVRKR+WGKW S I  P  GK+ ++W+GSF TPEMAA  +DV  ++FRG +ARLNFP+ ++ L   P++++ DDIR  A  A      AEG
Subjt:  MGDRLKKYRGVRKREWGKWTSAIYYPKQGKQKQLWIGSFDTPEMAARTHDVVTYFFRGPKARLNFPQALHPLHTFPSNANVDDIRDLARRA------AEG

Query:  TYGGGGESS
        T   GG SS
Subjt:  TYGGGGESS

B9T777 DNA binding protein, putative2.2e-1942.36Show/hide
Query:  YRGVRKREWGKWTSAIYYPKQGKQKQLWIGSFDTPEMAARTHDVVTYFFRGPKARLNFPQALHPLHTFPSNANVDDIRDLARRAA-----------EGTY
        YRGVRKR+WGKW S I  P  GK+ ++W+GSF+TPEMAA  +DV   +FRG +A+LNFP  +H L   P++ N DDIR  A  AA           EG+ 
Subjt:  YRGVRKREWGKWTSAIYYPKQGKQKQLWIGSFDTPEMAARTHDVVTYFFRGPKARLNFPQALHPLHTFPSNANVDDIRDLARRAA-----------EGTY

Query:  GGGG--------ESSIFGETDVNNVLHAESGVTESELVGERLFM
        GGGG         SS+ G   V         + ES L   +++M
Subjt:  GGGG--------ESSIFGETDVNNVLHAESGVTESELVGERLFM

SwissProt top hitse value%identityAlignment
O22174 Ethylene-responsive transcription factor ERF0081.2e-1440Show/hide
Query:  LKKYRGVRKREWGKWTSAIYYPKQGKQKQLWIGSFDTPEMAARTHDVVTYFFRGPKARLNFPQALHPLHTFPSNANVDDIRD--LARRAAEGTYGGGGES
        LK Y+G+R R+WGKW + I  P   K+ ++W+GS+ TPE AAR +D   ++ RGP ARLNFP+ L  L          D+    + R+AAE     G + 
Subjt:  LKKYRGVRKREWGKWTSAIYYPKQGKQKQLWIGSFDTPEMAARTHDVVTYFFRGPKARLNFPQALHPLHTFPSNANVDDIRD--LARRAAEGTYGGGGES

Query:  SIFGETDVNN
           G T V N
Subjt:  SIFGETDVNN

Q1ECI2 Ethylene-responsive transcription factor ERF0237.2e-1547.06Show/hide
Query:  YRGVRKREWGKWTSAIYYPKQGKQKQLWIGSFDTPEMAARTHDVVTYFFRGPKARLNFPQALHPLHTFPSNANVDDIRDLARRAA
        Y GVRKR WGKW S I  P+  K+ ++W+GSF  PEMAA+ +DV  +  +G KA+LNFP+ +  L   PS     DI+  A +AA
Subjt:  YRGVRKREWGKWTSAIYYPKQGKQKQLWIGSFDTPEMAARTHDVVTYFFRGPKARLNFPQALHPLHTFPSNANVDDIRDLARRAA

Q39127 Ethylene-responsive transcription factor TINY2.7e-1441.27Show/hide
Query:  YRGVRKREWGKWTSAIYYPKQGKQKQLWIGSFDTPEMAARTHDVVTYFFRGPKARLNFPQALHPLHTFPSNANVDDIRDLARRAA--EGTYGGGGESSI-
        YRGVRKR WGKW S I  P+  K+ ++W+G+F +PEMAAR HDV     +G  A LNFP  L      PS+ +  DI+  A +AA  E +      SS+ 
Subjt:  YRGVRKREWGKWTSAIYYPKQGKQKQLWIGSFDTPEMAARTHDVVTYFFRGPKARLNFPQALHPLHTFPSNANVDDIRDLARRAA--EGTYGGGGESSI-

Query:  FGETDVNNVLHA--ESGVTESELVGE
        F  +  ++ L +   S  T SE +GE
Subjt:  FGETDVNNVLHA--ESGVTESELVGE

Q9C9I2 Ethylene-responsive transcription factor ERF0212.9e-1646.39Show/hide
Query:  YRGVRKREWGKWTSAIYYPKQGKQKQLWIGSFDTPEMAARTHDVVTYFFRGPKARLNFPQALHPLHTFPSNANVDDIRDLARRAAEGTYGGGGESSI
        YRGVRKR+WGKW S I  P  G + ++W+GSF+TPEMAA  +DV  + FRG +ARLNFP+    L   P++++ D IR     A       G ES++
Subjt:  YRGVRKREWGKWTSAIYYPKQGKQKQLWIGSFDTPEMAARTHDVVTYFFRGPKARLNFPQALHPLHTFPSNANVDDIRDLARRAAEGTYGGGGESSI

Q9SUK8 Ethylene-responsive transcription factor ERF0393.2e-1547.06Show/hide
Query:  YRGVRKREWGKWTSAIYYPKQGKQKQLWIGSFDTPEMAARTHDVVTYFFRGPKARLNFPQALHPLHTFPSNANVDDIRDLARRAA
        +RGVR R+WGKW S I  P+  K+ ++W+G+F TPEMAAR HDV     +G  A LNFP+  + L   P++A+  DI++ A  AA
Subjt:  YRGVRKREWGKWTSAIYYPKQGKQKQLWIGSFDTPEMAARTHDVVTYFFRGPKARLNFPQALHPLHTFPSNANVDDIRDLARRAA

Arabidopsis top hitse value%identityAlignment
AT1G01250.1 Integrase-type DNA-binding superfamily protein5.1e-1647.06Show/hide
Query:  YRGVRKREWGKWTSAIYYPKQGKQKQLWIGSFDTPEMAARTHDVVTYFFRGPKARLNFPQALHPLHTFPSNANVDDIRDLARRAA
        Y GVRKR WGKW S I  P+  K+ ++W+GSF  PEMAA+ +DV  +  +G KA+LNFP+ +  L   PS     DI+  A +AA
Subjt:  YRGVRKREWGKWTSAIYYPKQGKQKQLWIGSFDTPEMAARTHDVVTYFFRGPKARLNFPQALHPLHTFPSNANVDDIRDLARRAA

AT1G71450.1 Integrase-type DNA-binding superfamily protein2.1e-1746.39Show/hide
Query:  YRGVRKREWGKWTSAIYYPKQGKQKQLWIGSFDTPEMAARTHDVVTYFFRGPKARLNFPQALHPLHTFPSNANVDDIRDLARRAAEGTYGGGGESSI
        YRGVRKR+WGKW S I  P  G + ++W+GSF+TPEMAA  +DV  + FRG +ARLNFP+    L   P++++ D IR     A       G ES++
Subjt:  YRGVRKREWGKWTSAIYYPKQGKQKQLWIGSFDTPEMAARTHDVVTYFFRGPKARLNFPQALHPLHTFPSNANVDDIRDLARRAAEGTYGGGGESSI

AT2G23340.1 DREB and EAR motif protein 38.7e-1640Show/hide
Query:  LKKYRGVRKREWGKWTSAIYYPKQGKQKQLWIGSFDTPEMAARTHDVVTYFFRGPKARLNFPQALHPLHTFPSNANVDDIRD--LARRAAEGTYGGGGES
        LK Y+G+R R+WGKW + I  P   K+ ++W+GS+ TPE AAR +D   ++ RGP ARLNFP+ L  L          D+    + R+AAE     G + 
Subjt:  LKKYRGVRKREWGKWTSAIYYPKQGKQKQLWIGSFDTPEMAARTHDVVTYFFRGPKARLNFPQALHPLHTFPSNANVDDIRD--LARRAAEGTYGGGGES

Query:  SIFGETDVNN
           G T V N
Subjt:  SIFGETDVNN

AT4G16750.1 Integrase-type DNA-binding superfamily protein2.3e-1647.06Show/hide
Query:  YRGVRKREWGKWTSAIYYPKQGKQKQLWIGSFDTPEMAARTHDVVTYFFRGPKARLNFPQALHPLHTFPSNANVDDIRDLARRAA
        +RGVR R+WGKW S I  P+  K+ ++W+G+F TPEMAAR HDV     +G  A LNFP+  + L   P++A+  DI++ A  AA
Subjt:  YRGVRKREWGKWTSAIYYPKQGKQKQLWIGSFDTPEMAARTHDVVTYFFRGPKARLNFPQALHPLHTFPSNANVDDIRDLARRAA

AT5G25810.1 Integrase-type DNA-binding superfamily protein1.9e-1541.27Show/hide
Query:  YRGVRKREWGKWTSAIYYPKQGKQKQLWIGSFDTPEMAARTHDVVTYFFRGPKARLNFPQALHPLHTFPSNANVDDIRDLARRAA--EGTYGGGGESSI-
        YRGVRKR WGKW S I  P+  K+ ++W+G+F +PEMAAR HDV     +G  A LNFP  L      PS+ +  DI+  A +AA  E +      SS+ 
Subjt:  YRGVRKREWGKWTSAIYYPKQGKQKQLWIGSFDTPEMAARTHDVVTYFFRGPKARLNFPQALHPLHTFPSNANVDDIRDLARRAA--EGTYGGGGESSI-

Query:  FGETDVNNVLHA--ESGVTESELVGE
        F  +  ++ L +   S  T SE +GE
Subjt:  FGETDVNNVLHA--ESGVTESELVGE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGATCGTTTGAAAAAATACAGAGGAGTTCGGAAGCGGGAGTGGGGTAAATGGACATCGGCGATTTACTACCCCAAGCAGGGGAAGCAGAAGCAACTTTGGATTGG
AAGTTTTGACACGCCGGAGATGGCAGCTAGGACACACGACGTTGTCACCTACTTCTTCCGAGGTCCTAAAGCACGTTTAAACTTTCCCCAAGCGCTCCACCCTCTCCACA
CATTCCCATCTAATGCAAATGTCGATGATATTCGAGATCTGGCTCGCCGTGCTGCTGAAGGCACCTATGGAGGTGGAGGTGAAAGTTCTATTTTCGGCGAAACGGACGTT
AATAATGTTCTTCATGCAGAATCCGGCGTCACGGAATCAGAATTGGTTGGTGAGAGGTTGTTTATGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAGATCGTTTGAAAAAATACAGAGGAGTTCGGAAGCGGGAGTGGGGTAAATGGACATCGGCGATTTACTACCCCAAGCAGGGGAAGCAGAAGCAACTTTGGATTGG
AAGTTTTGACACGCCGGAGATGGCAGCTAGGACACACGACGTTGTCACCTACTTCTTCCGAGGTCCTAAAGCACGTTTAAACTTTCCCCAAGCGCTCCACCCTCTCCACA
CATTCCCATCTAATGCAAATGTCGATGATATTCGAGATCTGGCTCGCCGTGCTGCTGAAGGCACCTATGGAGGTGGAGGTGAAAGTTCTATTTTCGGCGAAACGGACGTT
AATAATGTTCTTCATGCAGAATCCGGCGTCACGGAATCAGAATTGGTTGGTGAGAGGTTGTTTATGTAG
Protein sequenceShow/hide protein sequence
MGDRLKKYRGVRKREWGKWTSAIYYPKQGKQKQLWIGSFDTPEMAARTHDVVTYFFRGPKARLNFPQALHPLHTFPSNANVDDIRDLARRAAEGTYGGGGESSIFGETDV
NNVLHAESGVTESELVGERLFM