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CSPI04G02480 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G02480
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionDEAD-box ATP-dependent RNA helicase 10-like
Genome locationChr4:1444571..1445000
RNA-Seq ExpressionCSPI04G02480
SyntenyCSPI04G02480
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
GO:0097159 - organic cyclic compound binding (molecular function)
GO:1901363 - heterocyclic compound binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN52980.1 hypothetical protein Csa_014600 [Cucumis sativus]2.6e-1290Show/hide
Query:  MEQNREEELKTFKSLGTCEQLVEACWSSDWKPHGLEATVN
        MEQNREEELKTFKSLGTCEQLVEACWSSDWKPHG E  V+
Subjt:  MEQNREEELKTFKSLGTCEQLVEACWSSDWKPHGLEATVN
XP_022151346.1 DEAD-box ATP-dependent RNA helicase 10-like [Momordica charantia]7.7e-0460.87Show/hide
Query:  MEQNREEELKTFKSLGTCEQLVEACWSSDWK----------PHGLE
        MEQ+ EEE+KTFKSLG CEQLVEAC S  WK          PH LE
Subjt:  MEQNREEELKTFKSLGTCEQLVEACWSSDWK----------PHGLE
TrEMBL top hitse value%identityAlignment
A0A0A0KTP0 Uncharacterized protein1.3e-1290Show/hide
Query:  MEQNREEELKTFKSLGTCEQLVEACWSSDWKPHGLEATVN
        MEQNREEELKTFKSLGTCEQLVEACWSSDWKPHG E  V+
Subjt:  MEQNREEELKTFKSLGTCEQLVEACWSSDWKPHGLEATVN
A0A6J1DED3 DEAD-box ATP-dependent RNA helicase 10-like3.7e-0460.87Show/hide
Query:  MEQNREEELKTFKSLGTCEQLVEACWSSDWK----------PHGLE
        MEQ+ EEE+KTFKSLG CEQLVEAC S  WK          PH LE
Subjt:  MEQNREEELKTFKSLGTCEQLVEACWSSDWK----------PHGLE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCAAAACAGGGAAGAAGAGTTAAAGACGTTTAAGAGCTTGGGAACATGTGAGCAATTGGTGGAGGCATGCTGGAGTTCAGACTGGAAACCTCATGGCCTAGAAGC
TACCGTGAATATATTCAAGTTGACACATGCACTCGCCTTGACAAGAAATGTCAAAAGAAAGTTGAATGAAGAGGAAGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGCAAAACAGGGAAGAAGAGTTAAAGACGTTTAAGAGCTTGGGAACATGTGAGCAATTGGTGGAGGCATGCTGGAGTTCAGACTGGAAACCTCATGGCCTAGAAGC
TACCGTGAATATATTCAAGTTGACACATGCACTCGCCTTGACAAGAAATGTCAAAAGAAAGTTGAATGAAGAGGAAGAATAG
Protein sequenceShow/hide protein sequence
MEQNREEELKTFKSLGTCEQLVEACWSSDWKPHGLEATVNIFKLTHALALTRNVKRKLNEEEE