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CSPI04G02610 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G02610
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionDNA polymerase
Genome locationChr4:1577833..1578459
RNA-Seq ExpressionCSPI04G02610
SyntenyCSPI04G02610
Gene Ontology termsGO:0006260 - DNA replication (biological process)
GO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0034976 - response to endoplasmic reticulum stress (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0000166 - nucleotide binding (molecular function)
GO:0003677 - DNA binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0016491 - oxidoreductase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031719.1 chlorophyll(ide) b reductase NOL [Cucumis melo var. makuwa]2.4e-2879.27Show/hide
Query:  INLNMLSSIMLNWFVGNTNSGFIITKKLHWCFTLLMKIKHDFLEPNFLTYSQTHSSVFGVSAAPGHNNLLLTSPSYKIAPCK
        INLNM SSIMLNW V NTNS FIITK+L W FT LMKI  DFLEPNFLTYSQTHSS+FG++ APGHN LLLT PSYKIAP K
Subjt:  INLNMLSSIMLNWFVGNTNSGFIITKKLHWCFTLLMKIKHDFLEPNFLTYSQTHSSVFGVSAAPGHNNLLLTSPSYKIAPCK

KAA0057244.1 altered inheritance of mitochondria protein 32-like [Cucumis melo var. makuwa]3.9e-1868.12Show/hide
Query:  NTNSGFIITKKLHWCFTLLMKIKHDFLEPNFLTYSQTHSSVFGVSAAPGHNNLLLTSPSYKIAPCKGTI
        NTNS FII K+L W  T LMKI++DFLEP FLTYSQTH S+F ++A PGHN LL T  SYKIAP KGT+
Subjt:  NTNSGFIITKKLHWCFTLLMKIKHDFLEPNFLTYSQTHSSVFGVSAAPGHNNLLLTSPSYKIAPCKGTI

TYJ98677.1 protein CHROMATIN REMODELING 20 isoform X1 [Cucumis melo var. makuwa]7.4e-1754.81Show/hide
Query:  MLSSIMLNWFVGNTNSGFIITKKLHWC---------FTLLMKIKHDFLEPNFLTYSQTHSSVFGVSAAPGHNNLLLTSPSYKIAPCKGTITEGRLSVNKR
        M SSIMLNW V +TN+ FII KKL WC          T L   K   + P       THSS+FG  AAPGHN LLLT  SYKI   KGTIT GRLSVN R
Subjt:  MLSSIMLNWFVGNTNSGFIITKKLHWC---------FTLLMKIKHDFLEPNFLTYSQTHSSVFGVSAAPGHNNLLLTSPSYKIAPCKGTITEGRLSVNKR

Query:  FCSI
         C I
Subjt:  FCSI

TYK24465.1 uncharacterized protein E5676_scaffold266G00060 [Cucumis melo var. makuwa]3.9e-1075Show/hide
Query:  EPNFLTYSQTHSSVFGVSAAPGHNNLLLTSPSYKIAPCKGTITEGRLS
        +PNFLTYSQTHSSVF  SAAPGHN LLLT PSYKI   K TIT G L+
Subjt:  EPNFLTYSQTHSSVFGVSAAPGHNNLLLTSPSYKIAPCKGTITEGRLS

TYK24930.1 kelch-like protein 2 isoform X2 [Cucumis melo var. makuwa]1.0e-2675.56Show/hide
Query:  MSINLNMLSSIMLNWFVGNTNSGFIITKKLHWCFTLLMKIKHDFLEPNFLTYSQTHSSVFGVSAAPGHNNLLLTSPSYKIAPCK-GTITE
        MSINLNM S IMLNW V NTNSGFIIT++L W  T LMKI+HDFLEPNFLTYSQTHS VFG+S A G N LLLT PSYKIAP K G I E
Subjt:  MSINLNMLSSIMLNWFVGNTNSGFIITKKLHWCFTLLMKIKHDFLEPNFLTYSQTHSSVFGVSAAPGHNNLLLTSPSYKIAPCK-GTITE

TrEMBL top hitse value%identityAlignment
A0A5A7SR18 Chlorophyll(Ide) b reductase NOL1.2e-2879.27Show/hide
Query:  INLNMLSSIMLNWFVGNTNSGFIITKKLHWCFTLLMKIKHDFLEPNFLTYSQTHSSVFGVSAAPGHNNLLLTSPSYKIAPCK
        INLNM SSIMLNW V NTNS FIITK+L W FT LMKI  DFLEPNFLTYSQTHSS+FG++ APGHN LLLT PSYKIAP K
Subjt:  INLNMLSSIMLNWFVGNTNSGFIITKKLHWCFTLLMKIKHDFLEPNFLTYSQTHSSVFGVSAAPGHNNLLLTSPSYKIAPCK

A0A5A7UPW9 Altered inheritance of mitochondria protein 32-like1.9e-1868.12Show/hide
Query:  NTNSGFIITKKLHWCFTLLMKIKHDFLEPNFLTYSQTHSSVFGVSAAPGHNNLLLTSPSYKIAPCKGTI
        NTNS FII K+L W  T LMKI++DFLEP FLTYSQTH S+F ++A PGHN LL T  SYKIAP KGT+
Subjt:  NTNSGFIITKKLHWCFTLLMKIKHDFLEPNFLTYSQTHSSVFGVSAAPGHNNLLLTSPSYKIAPCKGTI

A0A5D3BHT1 Protein CHROMATIN REMODELING 20 isoform X13.6e-1754.81Show/hide
Query:  MLSSIMLNWFVGNTNSGFIITKKLHWC---------FTLLMKIKHDFLEPNFLTYSQTHSSVFGVSAAPGHNNLLLTSPSYKIAPCKGTITEGRLSVNKR
        M SSIMLNW V +TN+ FII KKL WC          T L   K   + P       THSS+FG  AAPGHN LLLT  SYKI   KGTIT GRLSVN R
Subjt:  MLSSIMLNWFVGNTNSGFIITKKLHWC---------FTLLMKIKHDFLEPNFLTYSQTHSSVFGVSAAPGHNNLLLTSPSYKIAPCKGTITEGRLSVNKR

Query:  FCSI
         C I
Subjt:  FCSI

A0A5D3DLH4 Uncharacterized protein1.9e-1075Show/hide
Query:  EPNFLTYSQTHSSVFGVSAAPGHNNLLLTSPSYKIAPCKGTITEGRLS
        +PNFLTYSQTHSSVF  SAAPGHN LLLT PSYKI   K TIT G L+
Subjt:  EPNFLTYSQTHSSVFGVSAAPGHNNLLLTSPSYKIAPCKGTITEGRLS

A0A5D3DNS2 Kelch-like protein 2 isoform X25.0e-2775.56Show/hide
Query:  MSINLNMLSSIMLNWFVGNTNSGFIITKKLHWCFTLLMKIKHDFLEPNFLTYSQTHSSVFGVSAAPGHNNLLLTSPSYKIAPCK-GTITE
        MSINLNM S IMLNW V NTNSGFIIT++L W  T LMKI+HDFLEPNFLTYSQTHS VFG+S A G N LLLT PSYKIAP K G I E
Subjt:  MSINLNMLSSIMLNWFVGNTNSGFIITKKLHWCFTLLMKIKHDFLEPNFLTYSQTHSSVFGVSAAPGHNNLLLTSPSYKIAPCK-GTITE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGATCAATCTCAACATGTTGAGTTCTATCATGTTGAACTGGTTTGTTGGCAATACTAATAGCGGCTTTATTATCACAAAAAAGCTTCATTGGTGTTTCACACTCTT
GATGAAGATCAAACATGACTTTCTGGAGCCAAATTTCCTCACATATTCTCAAACTCATAGCTCAGTATTCGGTGTCAGCGCTGCTCCTGGCCACAACAATTTGCTTCTTA
CTTCTCCAAGTTACAAGATTGCCCCATGCAAAGGTACAATAACCGAAGGTAGACTTTCTGTCAACAAAAGATTTTGCTCAATCTGA
mRNA sequenceShow/hide mRNA sequence
CTCCCCTCGAGTTGAGACGTAAATATCAATGAGGCCCAACTTGCTAACACAAAAGTCGAAGTTTGGTCTGAGAAGCCCCTTGGTGAGAACATTAGCAACCTGTTGGCTCG
AAGGGATGTATAGAATGCATACGCTCCCACTGTCAGGTCTTTCTTTGATGAAATGTCGATCAATCTCAACATGTTGAGTTCTATCATGTTGAACTGGTTTGTTGGCAATA
CTAATAGCGGCTTTATTATCACAAAAAAGCTTCATTGGTGTTTCACACTCTTGATGAAGATCAAACATGACTTTCTGGAGCCAAATTTCCTCACATATTCTCAAACTCAT
AGCTCAGTATTCGGTGTCAGCGCTGCTCCTGGCCACAACAATTTGCTTCTTACTTCTCCAAGTTACAAGATTGCCCCATGCAAAGGTACAATAACCGAAGGTAGACTTTC
TGTCAACAAAAGATTTTGCTCAATCTGAGTTAGTATATGCCTCAATGGTCTTTCTGTCTGTCTTTCTAAACATTAACCATTTACCAGGTGTCGTTTTCAAGTATCTCAAA
ATTTTGTTGATAGCTTCCATGTGTTCCTCATAAGGAGTCTGCATAAACTAGCTGACAACACTCACAGCAAATGAAAT
Protein sequenceShow/hide protein sequence
MSINLNMLSSIMLNWFVGNTNSGFIITKKLHWCFTLLMKIKHDFLEPNFLTYSQTHSSVFGVSAAPGHNNLLLTSPSYKIAPCKGTITEGRLSVNKRFCSI