; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI04G02770 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G02770
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionPoly(A)-specific ribonuclease
Genome locationChr4:1684229..1685017
RNA-Seq ExpressionCSPI04G02770
SyntenyCSPI04G02770
Gene Ontology termsGO:0043928 - exonucleolytic catabolism of deadenylated mRNA (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0000932 - P-body (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0030015 - CCR4-NOT core complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
InterPro domainsIPR006941 - Ribonuclease CAF1
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044544.1 putative CCR4-associated factor 1-like protein 8 [Cucumis melo var. makuwa]1.0e-12687.98Show/hide
Query:  FVRQVWYHNLAQELAILNDHLFKFPVIVMDTEFPGFLRSTPRGAPQEHLYQDLKFNVNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDLSSPTSMQ
        FVRQVWYHNL QEL ILND LFKFPVI MDTEFPGFLRST RGAP+EH YQDLKFN+NHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTD SSPTS+Q
Subjt:  FVRQVWYHNLAQELAILNDHLFKFPVIVMDTEFPGFLRSTPRGAPQEHLYQDLKFNVNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDLSSPTSMQ

Query:  YLKNNKGFEFKKQRKDGIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLRLMVIKAMPESMVEFAIIAQRFLGTVNDLKYMIGHCEHLMKGELGLKR
        YLKN KGFEFKKQRKDGIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLL+LM+I+ MPESMVEFAIIAQR LGTVNDLK+MI +CE+LM GELGLKR
Subjt:  YLKNNKGFEFKKQRKDGIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLRLMVIKAMPESMVEFAIIAQRFLGTVNDLKYMIGHCEHLMKGELGLKR

Query:  LAELLDVNDTVFSGGSDSLLIALAYVKMKK-LKLSSENTGGFLYGFQYRIRGYKTFCY
        LAELL+VNDT+F+GGSDSLLIALAY KMKK LK SSE T GFLYGF YRIRGY+TFCY
Subjt:  LAELLDVNDTVFSGGSDSLLIALAYVKMKK-LKLSSENTGGFLYGFQYRIRGYKTFCY

KAE8649090.1 hypothetical protein Csa_014788 [Cucumis sativus]9.1e-13698.78Show/hide
Query:  MSLFVRQVWYHNLAQELAILNDHLFKFPVIVMDTEFPGFLRSTPRGAPQEHLYQDLKFNVNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDLSSPT
        MSLFVRQVWYHNLAQELAILNDHLFKFPVIVMDTEFPGFLRSTPRGAPQEHLYQDLKFNVNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDLSSPT
Subjt:  MSLFVRQVWYHNLAQELAILNDHLFKFPVIVMDTEFPGFLRSTPRGAPQEHLYQDLKFNVNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDLSSPT

Query:  SMQYLKNNKGFEFKKQRKDGIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLRLMVIKAMPESMVEFAIIAQRFLGTVNDLKYMIGHCEHLMKGELG
        SMQYLKNNKGFEFKKQRKDGIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLL+LM+IKAMPESMVEFAIIAQRFLGTVNDLKYMIGHCE LMKGELG
Subjt:  SMQYLKNNKGFEFKKQRKDGIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLRLMVIKAMPESMVEFAIIAQRFLGTVNDLKYMIGHCEHLMKGELG

Query:  LKRLAELLDVNDTVFSGGSDSLLIALAYVKMKKLKLSSENTGGFLY
        LKRLAELLDVNDTVFSGGSDSLLIALAYVKMKKLKLSSENTGGFLY
Subjt:  LKRLAELLDVNDTVFSGGSDSLLIALAYVKMKKLKLSSENTGGFLY

XP_004151393.1 putative CCR4-associated factor 1 homolog 8 [Cucumis sativus]2.0e-14698.85Show/hide
Query:  MSLFVRQVWYHNLAQELAILNDHLFKFPVIVMDTEFPGFLRSTPRGAPQEHLYQDLKFNVNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDLSSPT
        MSLFVRQVWYHNLAQELAILNDHLFKFPVIVMDTEFPGFLRSTPRGAPQEHLYQDLKFNVNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDLSSPT
Subjt:  MSLFVRQVWYHNLAQELAILNDHLFKFPVIVMDTEFPGFLRSTPRGAPQEHLYQDLKFNVNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDLSSPT

Query:  SMQYLKNNKGFEFKKQRKDGIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLRLMVIKAMPESMVEFAIIAQRFLGTVNDLKYMIGHCEHLMKGELG
        SMQYLKNNKGFEFKKQRKDGIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLL+LM+IKAMPESMVEFAIIAQRFLGTVNDLKYMIGHCE LMKGELG
Subjt:  SMQYLKNNKGFEFKKQRKDGIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLRLMVIKAMPESMVEFAIIAQRFLGTVNDLKYMIGHCEHLMKGELG

Query:  LKRLAELLDVNDTVFSGGSDSLLIALAYVKMKKLKLSSENTGGFLYGFQYRIRGYKTFCYRY
        LKRLAELLDVNDTVFSGGSDSLLIALAYVKMKKLKLSSENTGGFLYGFQYRIRGYKTFCYRY
Subjt:  LKRLAELLDVNDTVFSGGSDSLLIALAYVKMKKLKLSSENTGGFLYGFQYRIRGYKTFCYRY

XP_008454486.1 PREDICTED: putative CCR4-associated factor 1 homolog 8 [Cucumis melo]3.5e-12787.98Show/hide
Query:  FVRQVWYHNLAQELAILNDHLFKFPVIVMDTEFPGFLRSTPRGAPQEHLYQDLKFNVNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDLSSPTSMQ
        FVR+VWYHN  QELAILND LFKFPVI MDTEFPGFLRSTPRGAP+EH YQDLKFN+NHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTD SSPTS+Q
Subjt:  FVRQVWYHNLAQELAILNDHLFKFPVIVMDTEFPGFLRSTPRGAPQEHLYQDLKFNVNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDLSSPTSMQ

Query:  YLKNNKGFEFKKQRKDGIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLRLMVIKAMPESMVEFAIIAQRFLGTVNDLKYMIGHCEHLMKGELGLKR
        YLKN KGFEFKKQRKDGIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLL+LM+I+ MPESMVEFAIIAQR LGTVNDLK+MI +CE+LM GELGLKR
Subjt:  YLKNNKGFEFKKQRKDGIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLRLMVIKAMPESMVEFAIIAQRFLGTVNDLKYMIGHCEHLMKGELGLKR

Query:  LAELLDVNDTVFSGGSDSLLIALAYVKMKK-LKLSSENTGGFLYGFQYRIRGYKTFCY
        LAELL+VNDT+F+GGSDSLLIALAY KMKK LK SSE T GFLYGF YRIRGY+TFCY
Subjt:  LAELLDVNDTVFSGGSDSLLIALAYVKMKK-LKLSSENTGGFLYGFQYRIRGYKTFCY

XP_008466654.1 PREDICTED: putative CCR4-associated factor 1 homolog 8 [Cucumis melo]9.2e-11287.88Show/hide
Query:  FVRQVWYHNLAQELAILNDHLFKFPVIVMDTEFPGFLRSTPRGAPQEHLYQDLKFNVNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDLSSPTSMQ
        FVRQVWYHNL QELAILND LFK P+IVMDTEF GFLRSTPRGAP+EHLYQDLKFN+NHLKILQLGLTLMD+NEHVGLSWVFTFSDFDEQTD SSPTS+Q
Subjt:  FVRQVWYHNLAQELAILNDHLFKFPVIVMDTEFPGFLRSTPRGAPQEHLYQDLKFNVNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDLSSPTSMQ

Query:  YLKNNKGFEFKKQRKDGIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLRLMVIKAMPESMVEFAIIAQRFLGTVNDLKYMIGHCEHLMKGELGLKR
        YLKNNK FEFKK RK  IPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLL+LM+I+ MPESMVEFA IAQR LGTVNDLK+MI +CEHLM GELGLKR
Subjt:  YLKNNKGFEFKKQRKDGIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLRLMVIKAMPESMVEFAIIAQRFLGTVNDLKYMIGHCEHLMKGELGLKR

Query:  LAELLDVNDTVFSGGSDSLLIALAYVKMKKL
        LAELL+VNDT+F+GGSDSLLIALAYVKMKK+
Subjt:  LAELLDVNDTVFSGGSDSLLIALAYVKMKKL

TrEMBL top hitse value%identityAlignment
A0A0A0KTU4 Poly(A)-specific ribonuclease9.5e-14798.85Show/hide
Query:  MSLFVRQVWYHNLAQELAILNDHLFKFPVIVMDTEFPGFLRSTPRGAPQEHLYQDLKFNVNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDLSSPT
        MSLFVRQVWYHNLAQELAILNDHLFKFPVIVMDTEFPGFLRSTPRGAPQEHLYQDLKFNVNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDLSSPT
Subjt:  MSLFVRQVWYHNLAQELAILNDHLFKFPVIVMDTEFPGFLRSTPRGAPQEHLYQDLKFNVNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDLSSPT

Query:  SMQYLKNNKGFEFKKQRKDGIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLRLMVIKAMPESMVEFAIIAQRFLGTVNDLKYMIGHCEHLMKGELG
        SMQYLKNNKGFEFKKQRKDGIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLL+LM+IKAMPESMVEFAIIAQRFLGTVNDLKYMIGHCE LMKGELG
Subjt:  SMQYLKNNKGFEFKKQRKDGIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLRLMVIKAMPESMVEFAIIAQRFLGTVNDLKYMIGHCEHLMKGELG

Query:  LKRLAELLDVNDTVFSGGSDSLLIALAYVKMKKLKLSSENTGGFLYGFQYRIRGYKTFCYRY
        LKRLAELLDVNDTVFSGGSDSLLIALAYVKMKKLKLSSENTGGFLYGFQYRIRGYKTFCYRY
Subjt:  LKRLAELLDVNDTVFSGGSDSLLIALAYVKMKKLKLSSENTGGFLYGFQYRIRGYKTFCYRY

A0A1S3BY95 Poly(A)-specific ribonuclease1.7e-12787.98Show/hide
Query:  FVRQVWYHNLAQELAILNDHLFKFPVIVMDTEFPGFLRSTPRGAPQEHLYQDLKFNVNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDLSSPTSMQ
        FVR+VWYHN  QELAILND LFKFPVI MDTEFPGFLRSTPRGAP+EH YQDLKFN+NHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTD SSPTS+Q
Subjt:  FVRQVWYHNLAQELAILNDHLFKFPVIVMDTEFPGFLRSTPRGAPQEHLYQDLKFNVNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDLSSPTSMQ

Query:  YLKNNKGFEFKKQRKDGIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLRLMVIKAMPESMVEFAIIAQRFLGTVNDLKYMIGHCEHLMKGELGLKR
        YLKN KGFEFKKQRKDGIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLL+LM+I+ MPESMVEFAIIAQR LGTVNDLK+MI +CE+LM GELGLKR
Subjt:  YLKNNKGFEFKKQRKDGIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLRLMVIKAMPESMVEFAIIAQRFLGTVNDLKYMIGHCEHLMKGELGLKR

Query:  LAELLDVNDTVFSGGSDSLLIALAYVKMKK-LKLSSENTGGFLYGFQYRIRGYKTFCY
        LAELL+VNDT+F+GGSDSLLIALAY KMKK LK SSE T GFLYGF YRIRGY+TFCY
Subjt:  LAELLDVNDTVFSGGSDSLLIALAYVKMKK-LKLSSENTGGFLYGFQYRIRGYKTFCY

A0A5A7T5A7 Putative CCR4-associated factor 1-like protein 84.4e-11287.88Show/hide
Query:  FVRQVWYHNLAQELAILNDHLFKFPVIVMDTEFPGFLRSTPRGAPQEHLYQDLKFNVNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDLSSPTSMQ
        FVRQVWYHNL QELAILND LFK P+IVMDTEF GFLRSTPRGAP+EHLYQDLKFN+NHLKILQLGLTLMD+NEHVGLSWVFTFSDFDEQTD SSPTS+Q
Subjt:  FVRQVWYHNLAQELAILNDHLFKFPVIVMDTEFPGFLRSTPRGAPQEHLYQDLKFNVNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDLSSPTSMQ

Query:  YLKNNKGFEFKKQRKDGIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLRLMVIKAMPESMVEFAIIAQRFLGTVNDLKYMIGHCEHLMKGELGLKR
        YLKNNK FEFKK RK  IPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLL+LM+I+ MPESMVEFA IAQR LGTVNDLK+MI +CEHLM GELGLKR
Subjt:  YLKNNKGFEFKKQRKDGIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLRLMVIKAMPESMVEFAIIAQRFLGTVNDLKYMIGHCEHLMKGELGLKR

Query:  LAELLDVNDTVFSGGSDSLLIALAYVKMKKL
        LAELL+VNDT+F+GGSDSLLIALAYVKMKK+
Subjt:  LAELLDVNDTVFSGGSDSLLIALAYVKMKKL

A0A5A7TN62 Poly(A)-specific ribonuclease4.9e-12787.98Show/hide
Query:  FVRQVWYHNLAQELAILNDHLFKFPVIVMDTEFPGFLRSTPRGAPQEHLYQDLKFNVNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDLSSPTSMQ
        FVRQVWYHNL QEL ILND LFKFPVI MDTEFPGFLRST RGAP+EH YQDLKFN+NHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTD SSPTS+Q
Subjt:  FVRQVWYHNLAQELAILNDHLFKFPVIVMDTEFPGFLRSTPRGAPQEHLYQDLKFNVNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDLSSPTSMQ

Query:  YLKNNKGFEFKKQRKDGIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLRLMVIKAMPESMVEFAIIAQRFLGTVNDLKYMIGHCEHLMKGELGLKR
        YLKN KGFEFKKQRKDGIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLL+LM+I+ MPESMVEFAIIAQR LGTVNDLK+MI +CE+LM GELGLKR
Subjt:  YLKNNKGFEFKKQRKDGIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLRLMVIKAMPESMVEFAIIAQRFLGTVNDLKYMIGHCEHLMKGELGLKR

Query:  LAELLDVNDTVFSGGSDSLLIALAYVKMKK-LKLSSENTGGFLYGFQYRIRGYKTFCY
        LAELL+VNDT+F+GGSDSLLIALAY KMKK LK SSE T GFLYGF YRIRGY+TFCY
Subjt:  LAELLDVNDTVFSGGSDSLLIALAYVKMKK-LKLSSENTGGFLYGFQYRIRGYKTFCY

A0A5D3D333 Poly(A)-specific ribonuclease1.7e-12787.98Show/hide
Query:  FVRQVWYHNLAQELAILNDHLFKFPVIVMDTEFPGFLRSTPRGAPQEHLYQDLKFNVNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDLSSPTSMQ
        FVR+VWYHN  QELAILND LFKFPVI MDTEFPGFLRSTPRGAP+EH YQDLKFN+NHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTD SSPTS+Q
Subjt:  FVRQVWYHNLAQELAILNDHLFKFPVIVMDTEFPGFLRSTPRGAPQEHLYQDLKFNVNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDLSSPTSMQ

Query:  YLKNNKGFEFKKQRKDGIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLRLMVIKAMPESMVEFAIIAQRFLGTVNDLKYMIGHCEHLMKGELGLKR
        YLKN KGFEFKKQRKDGIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLL+LM+I+ MPESMVEFAIIAQR LGTVNDLK+MI +CE+LM GELGLKR
Subjt:  YLKNNKGFEFKKQRKDGIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLRLMVIKAMPESMVEFAIIAQRFLGTVNDLKYMIGHCEHLMKGELGLKR

Query:  LAELLDVNDTVFSGGSDSLLIALAYVKMKK-LKLSSENTGGFLYGFQYRIRGYKTFCY
        LAELL+VNDT+F+GGSDSLLIALAY KMKK LK SSE T GFLYGF YRIRGY+TFCY
Subjt:  LAELLDVNDTVFSGGSDSLLIALAYVKMKK-LKLSSENTGGFLYGFQYRIRGYKTFCY

SwissProt top hitse value%identityAlignment
Q9LXM2 Probable CCR4-associated factor 1 homolog 91.0e-3334.08Show/hide
Query:  MSLFVRQVWYHNLAQELAILNDHLFKFPVIVMDTEFPGFL-RSTPRGAPQEHLYQDLKFNVNHLKILQLGLTLMDENE---------HVGLSWVFTFSDF
        +++  R+VW  NL  E  ++++ +  +P I MDTEFPG + +S  R    + LY  LK NV+ L ++Q+GLTL D N          H G  W F F DF
Subjt:  MSLFVRQVWYHNLAQELAILNDHLFKFPVIVMDTEFPGFL-RSTPRGAPQEHLYQDLKFNVNHLKILQLGLTLMDENE---------HVGLSWVFTFSDF

Query:  DEQTDLSSPTSMQYLKNNKGFEFKKQRKDGIPSAEFRRAFLPI-FSSNRITKWITFHGIYDVAYLLRLMVIKAMPESMVEFAIIAQRFLG-TVNDLKYMI
        D   D  +P S++ L+  +G +F++  +DG+ S  F    +      N    W+TFH  YD  YL++++  + +P ++ EF  + +   G  V D+K+M+
Subjt:  DEQTDLSSPTSMQYLKNNKGFEFKKQRKDGIPSAEFRRAFLPI-FSSNRITKWITFHGIYDVAYLLRLMVIKAMPESMVEFAIIAQRFLG-TVNDLKYMI

Query:  GHCEHLMKGELGLKRLAELLDVNDTV---FSGGSDSLLIALAYVKMKKLKL---SSENTGGFLYGFQ
          CE  + G  GL R+A  L+VN  V      GSDSLL   A+ +M+ L       E   G LYG +
Subjt:  GHCEHLMKGELGLKRLAELLDVNDTV---FSGGSDSLLIALAYVKMKKLKL---SSENTGGFLYGFQ

Q9LXM4 Putative CCR4-associated factor 1 homolog 82.6e-3237.61Show/hide
Query:  LAILNDHLFKFPVIVMDTEFPGFLRSTPRGAPQEHLYQDLKFNVNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDLSSPTSMQYLKNNKGFEFKKQ
        ++++ D L  +  I +DTEFP  LR T + A  E  Y D+ F+V+  K++QLGLTL D N  +G +W   FSDF    D  +  S+++L+ N G + +K 
Subjt:  LAILNDHLFKFPVIVMDTEFPGFLRSTPRGAPQEHLYQDLKFNVNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDLSSPTSMQYLKNNKGFEFKKQ

Query:  RKDGIP-SAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLRLMVIKAMPESMVEFAIIAQRFLGTVNDLKYMIGHCEHLMKGELGLKRLAELLDVN--DT
        R++GI     F   F  +  + R   W+TFHG YD+AYLL+    +A+P +   F+    R LG+V DLK M G CE L    LGL+ LA    +N   T
Subjt:  RKDGIP-SAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLRLMVIKAMPESMVEFAIIAQRFLGTVNDLKYMIGHCEHLMKGELGLKRLAELLDVN--DT

Query:  VFSGGSDSLLIALAYVKM
            GS++ L A+ + K+
Subjt:  VFSGGSDSLLIALAYVKM

Q9S9P2 Probable CCR4-associated factor 1 homolog 21.6e-3434.47Show/hide
Query:  VRQVWYHNLAQELAILNDHLFKFPVIVMDTEFPGFLRSTPRGAPQ--------EHLYQDLKFNVNHLKILQLGLTLMDENEHVGLS-------WVFTFSD
        +R+VW HNL QE+A++   +  FP + MDTEFPG +  T    P         E+ Y  LK NVN LK++QLGLTL DE  ++          W F F +
Subjt:  VRQVWYHNLAQELAILNDHLFKFPVIVMDTEFPGFLRSTPRGAPQ--------EHLYQDLKFNVNHLKILQLGLTLMDENEHVGLS-------WVFTFSD

Query:  FDEQTDLSSPTSMQYLKNNKGFEFKKQRKDGIPSAEFRRAFL--PIFSSNRITKWITFHGIYDVAYLLRLMVIKAMPESMVEFAIIAQRFLGTVNDLKYM
        F+  +D+ +  S++ L+ +   + +K  + G+ +  F    +   +  +++I  W+TFH  YD  YLL+L+  K +PE + +F    ++F   V D+KY+
Subjt:  FDEQTDLSSPTSMQYLKNNKGFEFKKQRKDGIPSAEFRRAFL--PIFSSNRITKWITFHGIYDVAYLLRLMVIKAMPESMVEFAIIAQRFLGTVNDLKYM

Query:  IGHCEHLMKGELGLKRLAELLDVNDTVFS--GGSDSLLIALAYVKMKKLKLSSE--NTGGFLYG
        +G C +L     GL+++AELL V     S   GSDSLL    ++KMK+   +       GFL+G
Subjt:  IGHCEHLMKGELGLKRLAELLDVNDTVFS--GGSDSLLIALAYVKMKKLKLSSE--NTGGFLYG

Q9SHJ0 Probable CCR4-associated factor 1 homolog 14.7e-3433.87Show/hide
Query:  RQVWYHNLAQELAILNDHLFKFPVIVMDTEFPGFLRSTPRGAPQEHLYQDLKFNVNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDLSSPTSMQYL
        R+VW  N+ +E+A + + L +FP+I  DTE+PG +  T   +  +  Y+ +K NV + K++Q G TL +    +G  W   FS+F + +D  +  S+++L
Subjt:  RQVWYHNLAQELAILNDHLFKFPVIVMDTEFPGFLRSTPRGAPQEHLYQDLKFNVNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDLSSPTSMQYL

Query:  KNNKGFEFKKQRKDGIPSAEFRRAFLP----IFSSNRITKWITFHGIYDVAYLLRLMVIKAMPESMVEFAIIAQRFLGTVNDLKYMIGHCEHLMKGELGL
        + + G + +K R +G+    F   F P    +F S +  +++TF G YD AY L ++    +PE+  EFA    +  G V D K M G CE L +  LGL
Subjt:  KNNKGFEFKKQRKDGIPSAEFRRAFLP----IFSSNRITKWITFHGIYDVAYLLRLMVIKAMPESMVEFAIIAQRFLGTVNDLKYMIGHCEHLMKGELGL

Query:  KRLAELLDVN--DTVFSGGSDSLLIALAYVKMKKLKLSSENTGGFLYG
         +LA+LL +         GSDSL+ AL ++K+K +   S    G +YG
Subjt:  KRLAELLDVN--DTVFSGGSDSLLIALAYVKMKKLKLSSENTGGFLYG

Q9SKZ2 Probable CCR4-associated factor 1 homolog 73.4e-3234.73Show/hide
Query:  SLFVRQVWYHNLAQELAILNDHLFKFPVIVMDTEFPGFLRSTPRG---APQEHLYQDLKFNVNHLKILQLGLTLMDENEHVGLS--------WVFTFSDF
        S+ +R+VW  NL  E+A++ + +  FP + MDTEFPG +   P G      E+ Y+ LK NVN LK++QLGLT  DE  ++           W F F +F
Subjt:  SLFVRQVWYHNLAQELAILNDHLFKFPVIVMDTEFPGFLRSTPRG---APQEHLYQDLKFNVNHLKILQLGLTLMDENEHVGLS--------WVFTFSDF

Query:  DEQTDLSSPTSMQYLKNNKGFEFKKQRKDGIPSAEFRRAFLPI-FSSNRITKWITFHGIYDVAYLLRLMVIKAMPESMVEFAIIAQRFLGTVNDLKYMIG
        D ++D+ +  S++ L+ + G +F K  + GI S  F    +      N    W+TFH  YD  YLL+L+  + +PE+   F  +   +   V D+K+++ 
Subjt:  DEQTDLSSPTSMQYLKNNKGFEFKKQRKDGIPSAEFRRAFLPI-FSSNRITKWITFHGIYDVAYLLRLMVIKAMPESMVEFAIIAQRFLGTVNDLKYMIG

Query:  HCEHLMKGELGLKRLAELLDVN--DTVFSGGSDSLLIALAYVKMKKLKL--SSENTGGFLYG
         C  L     GL +LAELLDV         GSDSLL +  + K+++     S E   G LYG
Subjt:  HCEHLMKGELGLKRLAELLDVN--DTVFSGGSDSLLIALAYVKMKKLKL--SSENTGGFLYG

Arabidopsis top hitse value%identityAlignment
AT1G06450.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.3e-3533.87Show/hide
Query:  RQVWYHNLAQELAILNDHLFKFPVIVMDTEFPGFLRSTPRGAPQEHLYQDLKFNVNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDLSSPTSMQYL
        R+VW  N+ +E+A + + L +FP+I  DTE+PG +  T   +  +  Y+ +K NV + K++Q G TL +    +G  W   FS+F + +D  +  S+++L
Subjt:  RQVWYHNLAQELAILNDHLFKFPVIVMDTEFPGFLRSTPRGAPQEHLYQDLKFNVNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDLSSPTSMQYL

Query:  KNNKGFEFKKQRKDGIPSAEFRRAFLP----IFSSNRITKWITFHGIYDVAYLLRLMVIKAMPESMVEFAIIAQRFLGTVNDLKYMIGHCEHLMKGELGL
        + + G + +K R +G+    F   F P    +F S +  +++TF G YD AY L ++    +PE+  EFA    +  G V D K M G CE L +  LGL
Subjt:  KNNKGFEFKKQRKDGIPSAEFRRAFLP----IFSSNRITKWITFHGIYDVAYLLRLMVIKAMPESMVEFAIIAQRFLGTVNDLKYMIGHCEHLMKGELGL

Query:  KRLAELLDVN--DTVFSGGSDSLLIALAYVKMKKLKLSSENTGGFLYG
         +LA+LL +         GSDSL+ AL ++K+K +   S    G +YG
Subjt:  KRLAELLDVN--DTVFSGGSDSLLIALAYVKMKKLKLSSENTGGFLYG

AT1G15920.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.1e-3534.47Show/hide
Query:  VRQVWYHNLAQELAILNDHLFKFPVIVMDTEFPGFLRSTPRGAPQ--------EHLYQDLKFNVNHLKILQLGLTLMDENEHVGLS-------WVFTFSD
        +R+VW HNL QE+A++   +  FP + MDTEFPG +  T    P         E+ Y  LK NVN LK++QLGLTL DE  ++          W F F +
Subjt:  VRQVWYHNLAQELAILNDHLFKFPVIVMDTEFPGFLRSTPRGAPQ--------EHLYQDLKFNVNHLKILQLGLTLMDENEHVGLS-------WVFTFSD

Query:  FDEQTDLSSPTSMQYLKNNKGFEFKKQRKDGIPSAEFRRAFL--PIFSSNRITKWITFHGIYDVAYLLRLMVIKAMPESMVEFAIIAQRFLGTVNDLKYM
        F+  +D+ +  S++ L+ +   + +K  + G+ +  F    +   +  +++I  W+TFH  YD  YLL+L+  K +PE + +F    ++F   V D+KY+
Subjt:  FDEQTDLSSPTSMQYLKNNKGFEFKKQRKDGIPSAEFRRAFL--PIFSSNRITKWITFHGIYDVAYLLRLMVIKAMPESMVEFAIIAQRFLGTVNDLKYM

Query:  IGHCEHLMKGELGLKRLAELLDVNDTVFS--GGSDSLLIALAYVKMKKLKLSSE--NTGGFLYG
        +G C +L     GL+++AELL V     S   GSDSLL    ++KMK+   +       GFL+G
Subjt:  IGHCEHLMKGELGLKRLAELLDVNDTVFS--GGSDSLLIALAYVKMKKLKLSSE--NTGGFLYG

AT1G15920.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.1e-3534.47Show/hide
Query:  VRQVWYHNLAQELAILNDHLFKFPVIVMDTEFPGFLRSTPRGAPQ--------EHLYQDLKFNVNHLKILQLGLTLMDENEHVGLS-------WVFTFSD
        +R+VW HNL QE+A++   +  FP + MDTEFPG +  T    P         E+ Y  LK NVN LK++QLGLTL DE  ++          W F F +
Subjt:  VRQVWYHNLAQELAILNDHLFKFPVIVMDTEFPGFLRSTPRGAPQ--------EHLYQDLKFNVNHLKILQLGLTLMDENEHVGLS-------WVFTFSD

Query:  FDEQTDLSSPTSMQYLKNNKGFEFKKQRKDGIPSAEFRRAFL--PIFSSNRITKWITFHGIYDVAYLLRLMVIKAMPESMVEFAIIAQRFLGTVNDLKYM
        F+  +D+ +  S++ L+ +   + +K  + G+ +  F    +   +  +++I  W+TFH  YD  YLL+L+  K +PE + +F    ++F   V D+KY+
Subjt:  FDEQTDLSSPTSMQYLKNNKGFEFKKQRKDGIPSAEFRRAFL--PIFSSNRITKWITFHGIYDVAYLLRLMVIKAMPESMVEFAIIAQRFLGTVNDLKYM

Query:  IGHCEHLMKGELGLKRLAELLDVNDTVFS--GGSDSLLIALAYVKMKKLKLSSE--NTGGFLYG
        +G C +L     GL+++AELL V     S   GSDSLL    ++KMK+   +       GFL+G
Subjt:  IGHCEHLMKGELGLKRLAELLDVNDTVFS--GGSDSLLIALAYVKMKKLKLSSE--NTGGFLYG

AT3G44240.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.8e-3337.61Show/hide
Query:  LAILNDHLFKFPVIVMDTEFPGFLRSTPRGAPQEHLYQDLKFNVNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDLSSPTSMQYLKNNKGFEFKKQ
        ++++ D L  +  I +DTEFP  LR T + A  E  Y D+ F+V+  K++QLGLTL D N  +G +W   FSDF    D  +  S+++L+ N G + +K 
Subjt:  LAILNDHLFKFPVIVMDTEFPGFLRSTPRGAPQEHLYQDLKFNVNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDLSSPTSMQYLKNNKGFEFKKQ

Query:  RKDGIP-SAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLRLMVIKAMPESMVEFAIIAQRFLGTVNDLKYMIGHCEHLMKGELGLKRLAELLDVN--DT
        R++GI     F   F  +  + R   W+TFHG YD+AYLL+    +A+P +   F+    R LG+V DLK M G CE L    LGL+ LA    +N   T
Subjt:  RKDGIP-SAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLRLMVIKAMPESMVEFAIIAQRFLGTVNDLKYMIGHCEHLMKGELGLKRLAELLDVN--DT

Query:  VFSGGSDSLLIALAYVKM
            GS++ L A+ + K+
Subjt:  VFSGGSDSLLIALAYVKM

AT3G44260.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein7.4e-3534.08Show/hide
Query:  MSLFVRQVWYHNLAQELAILNDHLFKFPVIVMDTEFPGFL-RSTPRGAPQEHLYQDLKFNVNHLKILQLGLTLMDENE---------HVGLSWVFTFSDF
        +++  R+VW  NL  E  ++++ +  +P I MDTEFPG + +S  R    + LY  LK NV+ L ++Q+GLTL D N          H G  W F F DF
Subjt:  MSLFVRQVWYHNLAQELAILNDHLFKFPVIVMDTEFPGFL-RSTPRGAPQEHLYQDLKFNVNHLKILQLGLTLMDENE---------HVGLSWVFTFSDF

Query:  DEQTDLSSPTSMQYLKNNKGFEFKKQRKDGIPSAEFRRAFLPI-FSSNRITKWITFHGIYDVAYLLRLMVIKAMPESMVEFAIIAQRFLG-TVNDLKYMI
        D   D  +P S++ L+  +G +F++  +DG+ S  F    +      N    W+TFH  YD  YL++++  + +P ++ EF  + +   G  V D+K+M+
Subjt:  DEQTDLSSPTSMQYLKNNKGFEFKKQRKDGIPSAEFRRAFLPI-FSSNRITKWITFHGIYDVAYLLRLMVIKAMPESMVEFAIIAQRFLG-TVNDLKYMI

Query:  GHCEHLMKGELGLKRLAELLDVNDTV---FSGGSDSLLIALAYVKMKKLKL---SSENTGGFLYGFQ
          CE  + G  GL R+A  L+VN  V      GSDSLL   A+ +M+ L       E   G LYG +
Subjt:  GHCEHLMKGELGLKRLAELLDVNDTV---FSGGSDSLLIALAYVKMKKLKL---SSENTGGFLYGFQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTTATTCGTTCGACAAGTTTGGTATCATAATCTCGCCCAAGAATTGGCCATTCTCAATGACCACCTTTTCAAGTTTCCAGTGATCGTCATGGACACTGAGTTCCC
TGGCTTTCTCCGTTCCACTCCCAGAGGTGCTCCCCAGGAACATCTCTATCAAGATTTGAAGTTCAATGTAAACCATTTGAAAATTCTTCAACTGGGTCTCACTCTGATGG
ATGAGAATGAGCATGTTGGGTTGTCTTGGGTGTTCACCTTTTCTGATTTTGATGAACAAACAGACCTCTCTAGTCCTACGTCAATGCAATATTTGAAGAACAACAAAGGG
TTTGAATTCAAGAAACAAAGGAAAGACGGAATTCCATCGGCTGAATTCCGACGTGCATTCCTGCCAATCTTTTCTAGCAATCGAATAACCAAATGGATCACATTTCATGG
TATTTATGATGTTGCTTACTTATTGAGGTTAATGGTGATCAAAGCCATGCCGGAGTCCATGGTGGAATTCGCTATTATAGCTCAACGTTTCCTTGGTACAGTCAACGACC
TCAAGTACATGATTGGCCATTGTGAACATTTAATGAAGGGTGAACTCGGACTTAAGAGACTTGCCGAGTTACTTGATGTGAACGACACTGTTTTCAGTGGTGGCTCTGAT
AGTTTGTTGATAGCTTTGGCATATGTGAAGATGAAGAAGCTAAAACTTTCGTCGGAGAATACTGGTGGATTTTTGTATGGTTTTCAATACAGAATTAGAGGATATAAAAC
CTTTTGTTATCGTTATTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTTATTCGTTCGACAAGTTTGGTATCATAATCTCGCCCAAGAATTGGCCATTCTCAATGACCACCTTTTCAAGTTTCCAGTGATCGTCATGGACACTGAGTTCCC
TGGCTTTCTCCGTTCCACTCCCAGAGGTGCTCCCCAGGAACATCTCTATCAAGATTTGAAGTTCAATGTAAACCATTTGAAAATTCTTCAACTGGGTCTCACTCTGATGG
ATGAGAATGAGCATGTTGGGTTGTCTTGGGTGTTCACCTTTTCTGATTTTGATGAACAAACAGACCTCTCTAGTCCTACGTCAATGCAATATTTGAAGAACAACAAAGGG
TTTGAATTCAAGAAACAAAGGAAAGACGGAATTCCATCGGCTGAATTCCGACGTGCATTCCTGCCAATCTTTTCTAGCAATCGAATAACCAAATGGATCACATTTCATGG
TATTTATGATGTTGCTTACTTATTGAGGTTAATGGTGATCAAAGCCATGCCGGAGTCCATGGTGGAATTCGCTATTATAGCTCAACGTTTCCTTGGTACAGTCAACGACC
TCAAGTACATGATTGGCCATTGTGAACATTTAATGAAGGGTGAACTCGGACTTAAGAGACTTGCCGAGTTACTTGATGTGAACGACACTGTTTTCAGTGGTGGCTCTGAT
AGTTTGTTGATAGCTTTGGCATATGTGAAGATGAAGAAGCTAAAACTTTCGTCGGAGAATACTGGTGGATTTTTGTATGGTTTTCAATACAGAATTAGAGGATATAAAAC
CTTTTGTTATCGTTATTAA
Protein sequenceShow/hide protein sequence
MSLFVRQVWYHNLAQELAILNDHLFKFPVIVMDTEFPGFLRSTPRGAPQEHLYQDLKFNVNHLKILQLGLTLMDENEHVGLSWVFTFSDFDEQTDLSSPTSMQYLKNNKG
FEFKKQRKDGIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLRLMVIKAMPESMVEFAIIAQRFLGTVNDLKYMIGHCEHLMKGELGLKRLAELLDVNDTVFSGGSD
SLLIALAYVKMKKLKLSSENTGGFLYGFQYRIRGYKTFCYRY