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CSPI04G03260 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G03260
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionprotein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
Genome locationChr4:2016110..2016361
RNA-Seq ExpressionCSPI04G03260
SyntenyCSPI04G03260
Gene Ontology termsGO:0018343 - protein farnesylation (biological process)
GO:0018344 - protein geranylgeranylation (biological process)
GO:0005953 - CAAX-protein geranylgeranyltransferase complex (cellular component)
GO:0005965 - protein farnesyltransferase complex (cellular component)
GO:0004660 - protein farnesyltransferase activity (molecular function)
GO:0004662 - CAAX-protein geranylgeranyltransferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK16993.1 protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha [Cucumis melo var. makuwa]5.1e-3288.16Show/hide
Query:  MDFDGTLPISERREWYDVTPLPQDDGPNPIVAIAYKQDFSELMGYFRAVYRADDHPPRSLHLTAEAIAMNPGNYTV
        MDFD +LPISER EWYDVTPLPQDDGPNPIVAIAYK+DFS+LM YFRAVYRAD+  PRSLHLTAEAIAMNPGNYTV
Subjt:  MDFDGTLPISERREWYDVTPLPQDDGPNPIVAIAYKQDFSELMGYFRAVYRADDHPPRSLHLTAEAIAMNPGNYTV

XP_004152103.3 protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha [Cucumis sativus]2.7e-3392.11Show/hide
Query:  MDFDGTLPISERREWYDVTPLPQDDGPNPIVAIAYKQDFSELMGYFRAVYRADDHPPRSLHLTAEAIAMNPGNYTV
        MDFD TLPISERREW DVTPLPQDDGPNPIVAIAYK+DFSELMGYFRAVYRAD+  PRSLHLTAEAIAMNPGNYTV
Subjt:  MDFDGTLPISERREWYDVTPLPQDDGPNPIVAIAYKQDFSELMGYFRAVYRADDHPPRSLHLTAEAIAMNPGNYTV

XP_008453985.1 PREDICTED: protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha [Cucumis melo]5.1e-3288.16Show/hide
Query:  MDFDGTLPISERREWYDVTPLPQDDGPNPIVAIAYKQDFSELMGYFRAVYRADDHPPRSLHLTAEAIAMNPGNYTV
        MDFD +LPISER EWYDVTPLPQDDGPNPIVAIAYK+DFS+LM YFRAVYRAD+  PRSLHLTAEAIAMNPGNYTV
Subjt:  MDFDGTLPISERREWYDVTPLPQDDGPNPIVAIAYKQDFSELMGYFRAVYRADDHPPRSLHLTAEAIAMNPGNYTV

XP_023527416.1 protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha [Cucurbita pepo subsp. pepo]5.9e-2880.26Show/hide
Query:  MDFDGTLPISERREWYDVTPLPQDDGPNPIVAIAYKQDFSELMGYFRAVYRADDHPPRSLHLTAEAIAMNPGNYTV
        MD D  +P+SER EW DVTPLPQDDGPNPIVAIAYK+DF+E+M YFRAVYRAD+  PRSL LTAEAIAMNPGNYTV
Subjt:  MDFDGTLPISERREWYDVTPLPQDDGPNPIVAIAYKQDFSELMGYFRAVYRADDHPPRSLHLTAEAIAMNPGNYTV

XP_038900826.1 protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha [Benincasa hispida]4.5e-2880.26Show/hide
Query:  MDFDGTLPISERREWYDVTPLPQDDGPNPIVAIAYKQDFSELMGYFRAVYRADDHPPRSLHLTAEAIAMNPGNYTV
        MD D +LP+SER EW DVTPLPQDDGPNPIVAIAYK+DFSELM YFRAVYR+++  PR+L LTAEAIAMNPGNYTV
Subjt:  MDFDGTLPISERREWYDVTPLPQDDGPNPIVAIAYKQDFSELMGYFRAVYRADDHPPRSLHLTAEAIAMNPGNYTV

TrEMBL top hitse value%identityAlignment
A0A1S3BYS8 protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha2.5e-3288.16Show/hide
Query:  MDFDGTLPISERREWYDVTPLPQDDGPNPIVAIAYKQDFSELMGYFRAVYRADDHPPRSLHLTAEAIAMNPGNYTV
        MDFD +LPISER EWYDVTPLPQDDGPNPIVAIAYK+DFS+LM YFRAVYRAD+  PRSLHLTAEAIAMNPGNYTV
Subjt:  MDFDGTLPISERREWYDVTPLPQDDGPNPIVAIAYKQDFSELMGYFRAVYRADDHPPRSLHLTAEAIAMNPGNYTV

A0A5A7TSR3 Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha2.5e-3288.16Show/hide
Query:  MDFDGTLPISERREWYDVTPLPQDDGPNPIVAIAYKQDFSELMGYFRAVYRADDHPPRSLHLTAEAIAMNPGNYTV
        MDFD +LPISER EWYDVTPLPQDDGPNPIVAIAYK+DFS+LM YFRAVYRAD+  PRSLHLTAEAIAMNPGNYTV
Subjt:  MDFDGTLPISERREWYDVTPLPQDDGPNPIVAIAYKQDFSELMGYFRAVYRADDHPPRSLHLTAEAIAMNPGNYTV

A0A5D3CYK3 Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha2.5e-3288.16Show/hide
Query:  MDFDGTLPISERREWYDVTPLPQDDGPNPIVAIAYKQDFSELMGYFRAVYRADDHPPRSLHLTAEAIAMNPGNYTV
        MDFD +LPISER EWYDVTPLPQDDGPNPIVAIAYK+DFS+LM YFRAVYRAD+  PRSLHLTAEAIAMNPGNYTV
Subjt:  MDFDGTLPISERREWYDVTPLPQDDGPNPIVAIAYKQDFSELMGYFRAVYRADDHPPRSLHLTAEAIAMNPGNYTV

A0A6J1GUK6 protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha2.8e-2880.26Show/hide
Query:  MDFDGTLPISERREWYDVTPLPQDDGPNPIVAIAYKQDFSELMGYFRAVYRADDHPPRSLHLTAEAIAMNPGNYTV
        MD D  +P+SER EW DVTPLPQDDGPNPIVAIAYK+DF+E+M YFRAVYRAD+  PRSL LTAEAIAMNPGNYTV
Subjt:  MDFDGTLPISERREWYDVTPLPQDDGPNPIVAIAYKQDFSELMGYFRAVYRADDHPPRSLHLTAEAIAMNPGNYTV

A0A6J1IXT4 protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha8.2e-2878.95Show/hide
Query:  MDFDGTLPISERREWYDVTPLPQDDGPNPIVAIAYKQDFSELMGYFRAVYRADDHPPRSLHLTAEAIAMNPGNYTV
        MD D  +P+SER EW DVTPLPQDDGPNPIVAIAYK+DF+E+M YFRAVYRAD+  PRSL LTAEAIA+NPGNYTV
Subjt:  MDFDGTLPISERREWYDVTPLPQDDGPNPIVAIAYKQDFSELMGYFRAVYRADDHPPRSLHLTAEAIAMNPGNYTV

SwissProt top hitse value%identityAlignment
O24304 Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha6.1e-2060.27Show/hide
Query:  DGTLPISERREWYDVTPLPQDDGPNPIVAIAYKQDFSELMGYFRAVYRADDHPPRSLHLTAEAIAMNPGNYTV
        D  +P+  R EW DVTP+PQDDGP+P+V I Y ++FSE+M YFRAVY A +   R+L LTAEAI +N GNYTV
Subjt:  DGTLPISERREWYDVTPLPQDDGPNPIVAIAYKQDFSELMGYFRAVYRADDHPPRSLHLTAEAIAMNPGNYTV

P29702 Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha3.8e-1448.48Show/hide
Query:  ERREWYDVTPLPQDDGPNPIVAIAYKQDFSELMGYFRAVYRADDHPPRSLHLTAEAIAMNPGNYTV
        +R EW D+ P+PQ+DGPNP+V I Y + F ++  YFRAV + D+   R+  LT +AI +N  NYTV
Subjt:  ERREWYDVTPLPQDDGPNPIVAIAYKQDFSELMGYFRAVYRADDHPPRSLHLTAEAIAMNPGNYTV

P93227 Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha4.2e-2162.86Show/hide
Query:  LPISERREWYDVTPLPQDDGPNPIVAIAYKQDFSELMGYFRAVYRADDHPPRSLHLTAEAIAMNPGNYTV
        +P  ER +W DV P+PQDDGP P+V IAY +DFSE M YFRA+Y AD+   R+L LT EAI +NPGNYTV
Subjt:  LPISERREWYDVTPLPQDDGPNPIVAIAYKQDFSELMGYFRAVYRADDHPPRSLHLTAEAIAMNPGNYTV

Q54RT9 Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha7.7e-1549.32Show/hide
Query:  DGTLPISERREWYDVTPLPQDDGPNPIVAIAYKQDFSELMGYFRAVYRADDHPPRSLHLTAEAIAMNPGNYTV
        DG +P S+R EW DV PL QDDGP+PI  I Y + F + M YFRA+ ++ +   R L L  E I  NP NYT+
Subjt:  DGTLPISERREWYDVTPLPQDDGPNPIVAIAYKQDFSELMGYFRAVYRADDHPPRSLHLTAEAIAMNPGNYTV

Q9LX33 Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha2.6e-2360.53Show/hide
Query:  MDFDGTLPISERREWYDVTPLPQDDGPNPIVAIAYKQDFSELMGYFRAVYRADDHPPRSLHLTAEAIAMNPGNYTV
        M+FD T+P+S+R EW DV PL QDDGPNP+V IAYK++F E M YFRA+Y +D+  PR+L LT E + +N GNYTV
Subjt:  MDFDGTLPISERREWYDVTPLPQDDGPNPIVAIAYKQDFSELMGYFRAVYRADDHPPRSLHLTAEAIAMNPGNYTV

Arabidopsis top hitse value%identityAlignment
AT3G59380.1 farnesyltransferase A1.9e-2460.53Show/hide
Query:  MDFDGTLPISERREWYDVTPLPQDDGPNPIVAIAYKQDFSELMGYFRAVYRADDHPPRSLHLTAEAIAMNPGNYTV
        M+FD T+P+S+R EW DV PL QDDGPNP+V IAYK++F E M YFRA+Y +D+  PR+L LT E + +N GNYTV
Subjt:  MDFDGTLPISERREWYDVTPLPQDDGPNPIVAIAYKQDFSELMGYFRAVYRADDHPPRSLHLTAEAIAMNPGNYTV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTTCGATGGCACTTTACCCATCAGCGAGCGACGAGAGTGGTACGACGTAACTCCGCTTCCGCAAGACGATGGTCCCAATCCGATTGTGGCGATTGCCTACAAACA
AGACTTCTCTGAGCTCATGGGTTACTTCCGAGCTGTTTATCGAGCAGATGATCATCCTCCTCGTTCTCTCCACCTCACTGCTGAAGCCATTGCTATGAATCCTGGCAATT
ACACTGTAATTTCTTCTTCCTTGAATGCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGATTTCGATGGCACTTTACCCATCAGCGAGCGACGAGAGTGGTACGACGTAACTCCGCTTCCGCAAGACGATGGTCCCAATCCGATTGTGGCGATTGCCTACAAACA
AGACTTCTCTGAGCTCATGGGTTACTTCCGAGCTGTTTATCGAGCAGATGATCATCCTCCTCGTTCTCTCCACCTCACTGCTGAAGCCATTGCTATGAATCCTGGCAATT
ACACTGTAATTTCTTCTTCCTTGAATGCATGA
Protein sequenceShow/hide protein sequence
MDFDGTLPISERREWYDVTPLPQDDGPNPIVAIAYKQDFSELMGYFRAVYRADDHPPRSLHLTAEAIAMNPGNYTVISSSLNA