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CSPI04G03370 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G03370
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptiondisease resistance protein RGA2-like
Genome locationChr4:2070458..2071625
RNA-Seq ExpressionCSPI04G03370
SyntenyCSPI04G03370
Gene Ontology termsGO:0043531 - ADP binding (molecular function)
InterPro domainsIPR002182 - NB-ARC
IPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8649112.1 hypothetical protein Csa_014822 [Cucumis sativus]7.5e-6499.19Show/hide
Query:  MKDTTETMCKRYHESSPLGLIAMVREECIETHGNVDIIKQIRETTSNLNFDEVMIGREVEVSNIVKLVIEFSKEHQISIIPIVGMRGLGNTTLAFNHESV
        MKDTTETMCKRYHESSPLGLIAMVREECIETHGNVDIIKQIRETTSNLNFDEVMIGREVEVSNIVKLVIEFSKEHQISIIPIVGMRGLGNTTLAFNHE V
Subjt:  MKDTTETMCKRYHESSPLGLIAMVREECIETHGNVDIIKQIRETTSNLNFDEVMIGREVEVSNIVKLVIEFSKEHQISIIPIVGMRGLGNTTLAFNHESV

Query:  KGHFDETIWLCVWLNMKTPRNLVT
        KGHFDETIWLCVWLNMKTPRNLVT
Subjt:  KGHFDETIWLCVWLNMKTPRNLVT

XP_022145177.1 putative disease resistance protein RGA3 [Momordica charantia]4.2e-3066.09Show/hide
Query:  MKDTTETMCKRYHESSPLGLIAMVREECIETHGNVDIIKQIRETTSNLNFDEVMIGREVEVSNIVKLVIEFSKEHQISIIPIVGMRGLGNTTLA---FNH
        MKD TET+ K Y E+SPLGL+    +E IET  N  ++KQIRETTSNLNF+  ++GRE+EVSNIVKLVI+ S EH  SIIPIVGM GLG TTLA   FNH
Subjt:  MKDTTETMCKRYHESSPLGLIAMVREECIETHGNVDIIKQIRETTSNLNFDEVMIGREVEVSNIVKLVIEFSKEHQISIIPIVGMRGLGNTTLA---FNH

Query:  ESVKGHFDETIWLCV
        E +KGHFD+TIW+CV
Subjt:  ESVKGHFDETIWLCV

XP_038877313.1 putative disease resistance protein RGA3 [Benincasa hispida]1.0e-3673.04Show/hide
Query:  MKDTTETMCKRYHESSPLGLIAMVREECIETHGNVDIIKQIRETTSNLNFDEVMIGREVEVSNIVKLVIEFSKEHQISIIPIVGMRGLGNTTLA---FNH
        MKD TET+ K Y E+SPLGL+A++ EE IETH N++ +KQIRETTSNLNF+EV+IGREVEVSNIVK+VIE S EH +SIIPIVGM GLG TTLA   FNH
Subjt:  MKDTTETMCKRYHESSPLGLIAMVREECIETHGNVDIIKQIRETTSNLNFDEVMIGREVEVSNIVKLVIEFSKEHQISIIPIVGMRGLGNTTLA---FNH

Query:  ESVKGHFDETIWLCV
        E VK HFDETIW+CV
Subjt:  ESVKGHFDETIWLCV

XP_038895409.1 disease resistance protein RGA2-like isoform X1 [Benincasa hispida]3.2e-3065.22Show/hide
Query:  MKDTTETMCKRYHESSPLGLIAMVREECIETHGNVDIIKQIRETTSNLNFDEVMIGREVEVSNIVKLVIEFSKEHQISIIPIVGMRGLGNTTLA---FNH
        MKD TET+ K Y E+SPLGL+A+V  E  E   N+D +KQIR+TTS L  +EV+IGREVEVSNIVKLVIE S EH +SIIPIVGM GLG TTLA   FNH
Subjt:  MKDTTETMCKRYHESSPLGLIAMVREECIETHGNVDIIKQIRETTSNLNFDEVMIGREVEVSNIVKLVIEFSKEHQISIIPIVGMRGLGNTTLA---FNH

Query:  ESVKGHFDETIWLCV
          V+ HFD+T+W+CV
Subjt:  ESVKGHFDETIWLCV

XP_038895415.1 disease resistance protein RGA2-like isoform X2 [Benincasa hispida]3.2e-3065.22Show/hide
Query:  MKDTTETMCKRYHESSPLGLIAMVREECIETHGNVDIIKQIRETTSNLNFDEVMIGREVEVSNIVKLVIEFSKEHQISIIPIVGMRGLGNTTLA---FNH
        MKD TET+ K Y E+SPLGL+A+V  E  E   N+D +KQIR+TTS L  +EV+IGREVEVSNIVKLVIE S EH +SIIPIVGM GLG TTLA   FNH
Subjt:  MKDTTETMCKRYHESSPLGLIAMVREECIETHGNVDIIKQIRETTSNLNFDEVMIGREVEVSNIVKLVIEFSKEHQISIIPIVGMRGLGNTTLA---FNH

Query:  ESVKGHFDETIWLCV
          V+ HFD+T+W+CV
Subjt:  ESVKGHFDETIWLCV

TrEMBL top hitse value%identityAlignment
A0A0A0KZ04 NB-ARC domain-containing protein5.3e-5598.2Show/hide
Query:  ESSPLGLIAMVREECIETHGNVDIIKQIRETTSNLNFDEVMIGREVEVSNIVKLVIEFSKEHQISIIPIVGMRGLGNTTLAFNHESVKGHFDETIWLCVW
        +SSPLGLIAMVREECIETHGNVDIIKQIRETTSNLNFDEVMIGREVEVSNIVKLVIEFSKEHQISIIPIVGMRGLGNTTLAFNHE VKGHFDETIWLCVW
Subjt:  ESSPLGLIAMVREECIETHGNVDIIKQIRETTSNLNFDEVMIGREVEVSNIVKLVIEFSKEHQISIIPIVGMRGLGNTTLAFNHESVKGHFDETIWLCVW

Query:  LNMKTPRNLVT
        LNMKTPRNLVT
Subjt:  LNMKTPRNLVT

A0A6J1CU86 disease resistance protein RGA2-like5.7e-2555.65Show/hide
Query:  MKDTTETMCKRYHESSPLGLIAMVREECIETHGNVDIIKQIRETTSNLNFDEVMIGREVEVSNIVKLVIEFSKEHQISIIPIVGMRGLGNTTLA---FNH
        +KD T+ + K Y E+SPLGL+         T  N  ++ QIR+TTSNLNF+  ++GRE EVSNIVKLVI+ S EH +SI+PIVGM GLG TT A   FNH
Subjt:  MKDTTETMCKRYHESSPLGLIAMVREECIETHGNVDIIKQIRETTSNLNFDEVMIGREVEVSNIVKLVIEFSKEHQISIIPIVGMRGLGNTTLA---FNH

Query:  ESVKGHFDETIWLCV
        +++KGHFD  IW+CV
Subjt:  ESVKGHFDETIWLCV

A0A6J1CUL8 putative disease resistance protein RGA43.5e-2257.39Show/hide
Query:  MKDTTETMCKRYHESSPLGLIAMVREECIETHGNVDIIKQIRETTSNLNFDEVMIGREVEVSNIVKLVIEFSKEHQISIIPIVGMRGLGNTTLA---FNH
        MK  +ET+ + Y E+S LG +    EE  ET    +I++QIRETTS LNF   +IGRE+EV  I+KLVI+ S EH++SIIPIVGM GLG TTLA   FNH
Subjt:  MKDTTETMCKRYHESSPLGLIAMVREECIETHGNVDIIKQIRETTSNLNFDEVMIGREVEVSNIVKLVIEFSKEHQISIIPIVGMRGLGNTTLA---FNH

Query:  ESVKGHFDETIWLCV
        E +K HFD+TIW+CV
Subjt:  ESVKGHFDETIWLCV

A0A6J1CVR3 putative disease resistance protein RGA32.0e-2560.87Show/hide
Query:  MKDTTETMCKRYHESSPLGLIAMVREECIETHGNVDIIKQIRETTSNLNFDEVMIGREVEVSNIVKLVIEFSKEHQISIIPIVGMRGLGNTTLA---FNH
        MK  +ET+ + Y+E+S LGL+    EE  ET  N +I+KQIRETTS LNF+  +IGRE+EV NIVKLVI+ S EH++SIIPIVGM GLG TTLA   FNH
Subjt:  MKDTTETMCKRYHESSPLGLIAMVREECIETHGNVDIIKQIRETTSNLNFDEVMIGREVEVSNIVKLVIEFSKEHQISIIPIVGMRGLGNTTLA---FNH

Query:  ESVKGHFDETIWLCV
        E +K HFD++IW+CV
Subjt:  ESVKGHFDETIWLCV

A0A6J1CVR6 putative disease resistance protein RGA32.0e-3066.09Show/hide
Query:  MKDTTETMCKRYHESSPLGLIAMVREECIETHGNVDIIKQIRETTSNLNFDEVMIGREVEVSNIVKLVIEFSKEHQISIIPIVGMRGLGNTTLA---FNH
        MKD TET+ K Y E+SPLGL+    +E IET  N  ++KQIRETTSNLNF+  ++GRE+EVSNIVKLVI+ S EH  SIIPIVGM GLG TTLA   FNH
Subjt:  MKDTTETMCKRYHESSPLGLIAMVREECIETHGNVDIIKQIRETTSNLNFDEVMIGREVEVSNIVKLVIEFSKEHQISIIPIVGMRGLGNTTLA---FNH

Query:  ESVKGHFDETIWLCV
        E +KGHFD+TIW+CV
Subjt:  ESVKGHFDETIWLCV

SwissProt top hitse value%identityAlignment
Q7XBQ9 Disease resistance protein RGA26.1e-0836.84Show/hide
Query:  VREECIETHGNVDIIKQ--IRETTSNLNFDEVMIGREVEVSNIVKLVI-EFSKEHQISIIPIVGMRGLGNTTLA---FNHESVKGHFDETIWLCV
        + EE    H +  I+++  +R  T ++  +  + GR+ E   IVK++I   S    +S++PI+GM GLG TTLA   FN + V  HF   IW+CV
Subjt:  VREECIETHGNVDIIKQ--IRETTSNLNFDEVMIGREVEVSNIVKLVI-EFSKEHQISIIPIVGMRGLGNTTLA---FNHESVKGHFDETIWLCV

Q8W3K3 Putative disease resistance protein At1g584002.7e-0832.43Show/hide
Query:  TETMCKRYHESSPLGLIAMVREECIETHGNVDIIKQIRETTSNLNFDEVMIGREVEVSNIVKLVIEFSKEHQISIIPIVGMRGLGNTTLA---FNHESVK
        ++ + K   +    G+  M+ +    +H   +  +++R+T S   ++   +G EV V  +V  ++E   E  I I+ + GM GLG TTLA   FNHE VK
Subjt:  TETMCKRYHESSPLGLIAMVREECIETHGNVDIIKQIRETTSNLNFDEVMIGREVEVSNIVKLVIEFSKEHQISIIPIVGMRGLGNTTLA---FNHESVK

Query:  GHFDETIWLCV
          FD   W+CV
Subjt:  GHFDETIWLCV

Q8W474 Probable disease resistance protein At1g583901.0e-0738.96Show/hide
Query:  KQIRETTSNLNFDEVMIGREVEVSNIVKLVIEFSKEHQISIIPIVGMRGLGNTTLA---FNHESVKGHFDETIWLCV
        +++R+T S  +++   +G EV V  +V  +++   E  + ++ I GM GLG TTLA   FNHE VK  FD   W+CV
Subjt:  KQIRETTSNLNFDEVMIGREVEVSNIVKLVIEFSKEHQISIIPIVGMRGLGNTTLA---FNHESVKGHFDETIWLCV

Q9LQ54 Probable disease resistance protein At1g596202.1e-0841.56Show/hide
Query:  KQIRETTSNLNFDEVMIGREVEVSNIVKLVIEFSKEHQISIIPIVGMRGLGNTTLA---FNHESVKGHFDETIWLCV
        + +R+T SN N + V++G E  V  +V  ++E     Q  ++ I GM G+G TTLA   FNHE+VK HF +  W+CV
Subjt:  KQIRETTSNLNFDEVMIGREVEVSNIVKLVIEFSKEHQISIIPIVGMRGLGNTTLA---FNHESVKGHFDETIWLCV

Q9XIF0 Putative disease resistance protein At1g597806.7e-0733.33Show/hide
Query:  IETHGNVDIIKQIRETTSNLNFDEVMIGREVEVSNIVKLVIEFSKEHQISIIPIVGMRGLGNTTLA---FNHESVKGHFDETIWLCV
        +++H  ++  +++R T S+   +  ++G E  V  +V+ ++     H +S   I G+ GLG TTLA   F+H+ VK HFD   W+CV
Subjt:  IETHGNVDIIKQIRETTSNLNFDEVMIGREVEVSNIVKLVIEFSKEHQISIIPIVGMRGLGNTTLA---FNHESVKGHFDETIWLCV

Arabidopsis top hitse value%identityAlignment
AT1G58390.1 Disease resistance protein (CC-NBS-LRR class) family7.4e-0938.96Show/hide
Query:  KQIRETTSNLNFDEVMIGREVEVSNIVKLVIEFSKEHQISIIPIVGMRGLGNTTLA---FNHESVKGHFDETIWLCV
        +++R+T S  +++   +G EV V  +V  +++   E  + ++ I GM GLG TTLA   FNHE VK  FD   W+CV
Subjt:  KQIRETTSNLNFDEVMIGREVEVSNIVKLVIEFSKEHQISIIPIVGMRGLGNTTLA---FNHESVKGHFDETIWLCV

AT1G58400.1 Disease resistance protein (CC-NBS-LRR class) family1.9e-0932.43Show/hide
Query:  TETMCKRYHESSPLGLIAMVREECIETHGNVDIIKQIRETTSNLNFDEVMIGREVEVSNIVKLVIEFSKEHQISIIPIVGMRGLGNTTLA---FNHESVK
        ++ + K   +    G+  M+ +    +H   +  +++R+T S   ++   +G EV V  +V  ++E   E  I I+ + GM GLG TTLA   FNHE VK
Subjt:  TETMCKRYHESSPLGLIAMVREECIETHGNVDIIKQIRETTSNLNFDEVMIGREVEVSNIVKLVIEFSKEHQISIIPIVGMRGLGNTTLA---FNHESVK

Query:  GHFDETIWLCV
          FD   W+CV
Subjt:  GHFDETIWLCV

AT1G58848.1 Disease resistance protein (CC-NBS-LRR class) family5.3e-0741.54Show/hide
Query:  DEVMIGREVEVSNIVKLVIEFSKEHQISIIPIVGMRGLGNTTLA---FNHESVKGHFDETIWLCV
        D   +G E  V  +V  +++   E  + ++ I GM GLG TTLA   FNHE VK  FD   W+CV
Subjt:  DEVMIGREVEVSNIVKLVIEFSKEHQISIIPIVGMRGLGNTTLA---FNHESVKGHFDETIWLCV

AT1G59780.1 NB-ARC domain-containing disease resistance protein4.8e-0833.33Show/hide
Query:  IETHGNVDIIKQIRETTSNLNFDEVMIGREVEVSNIVKLVIEFSKEHQISIIPIVGMRGLGNTTLA---FNHESVKGHFDETIWLCV
        +++H  ++  +++R T S+   +  ++G E  V  +V+ ++     H +S   I G+ GLG TTLA   F+H+ VK HFD   W+CV
Subjt:  IETHGNVDIIKQIRETTSNLNFDEVMIGREVEVSNIVKLVIEFSKEHQISIIPIVGMRGLGNTTLA---FNHESVKGHFDETIWLCV

AT5G35450.1 Disease resistance protein (CC-NBS-LRR class) family3.1e-0737.5Show/hide
Query:  DIIKQIRETTSNLNFDEVMIGREVEVSNIVKLVIEFSKEHQISIIPIVGMRGLGNTTLA---FNHESVKGHFDETIWLCV
        DI ++IR+T  N + +  ++G E  V  +V  ++E      I ++ I GM G+G TTLA   F+H+ V+ HFD   W+CV
Subjt:  DIIKQIRETTSNLNFDEVMIGREVEVSNIVKLVIEFSKEHQISIIPIVGMRGLGNTTLA---FNHESVKGHFDETIWLCV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGACACTACTGAAACTATGTGTAAACGTTACCATGAGTCAAGTCCTTTAGGCTTGATTGCTATGGTTAGGGAGGAATGCATTGAAACACATGGGAATGTTGATAT
AATTAAGCAGATTCGAGAGACAACATCAAATCTTAATTTTGATGAAGTTATGATAGGAAGAGAAGTGGAAGTTTCAAACATAGTGAAGTTGGTGATTGAATTTAGCAAAG
AACATCAAATATCCATCATACCCATTGTGGGTATGCGTGGGTTGGGGAATACAACTTTGGCCTTCAATCATGAGTCGGTTAAAGGTCATTTTGATGAAACTATATGGCTA
TGTGTGTGGCTGAACATGAAAACACCTCGCAATCTTGTTACTTGA
mRNA sequenceShow/hide mRNA sequence
AAAAAATATAAAAGCTTTGCCTCTGTGTTATTTCTTCTCAATATGAATATAATTGAGTGATATTGTATCAATTAATTGAAATTAGATACCATGGTAATTATCGTTAAATA
AAAATAATAAAATAAACATCTCTTCCAAGCTATGTTTCTTTGTCTGGTGTGCAAGAAGTTTTGAAGAAGGTACTCAAAGTTGCTTGAAAAATTGGTGTGGCTTTGGGCTT
CGAGAAGTAGCTCTCCAAGTTGACAAAATGGTTACTCAAATCTGAAGCCATTTAAAGAGATATCAACACTAAGAAATTGCACCATGATCTGTGAGAATGTGGGTGGAGGA
TCTTCAACATCTTGTTTACGATGATCTGTTGGATGAGCTTGTTTATGAAGATCTTCGACGCAAAGTGGGAACAGAGAAAATAAAGAAAAAGGTTCACAGTTTCTTTCATC
TTCCCATAATAATCCATTTTTGGTTTGTAGAAATATGACCTAAAGAATGAAGGACACTACTGAAACTATGTGTAAACGTTACCATGAGTCAAGTCCTTTAGGCTTGATTG
CTATGGTTAGGGAGGAATGCATTGAAACACATGGGAATGTTGATATAATTAAGCAGATTCGAGAGACAACATCAAATCTTAATTTTGATGAAGTTATGATAGGAAGAGAA
GTGGAAGTTTCAAACATAGTGAAGTTGGTGATTGAATTTAGCAAAGAACATCAAATATCCATCATACCCATTGTGGGTATGCGTGGGTTGGGGAATACAACTTTGGCCTT
CAATCATGAGTCGGTTAAAGGTCATTTTGATGAAACTATATGGCTATGTGTGTGGCTGAACATGAAAACACCTCGCAATCTTGTTACTTGAATAAGAAGCATTGTGGCGA
ATTTGTGAGGAAATCTAGTGGTGATACTTTTAACTTTTGAAGTGATAGTAAGAGTCCAAGAAATGGGATACAAGCTGAAATTGATTTGCCTTACTTTGATGAATGATACA
TGAAAAAATTATTTGATTTGATTAAAAAAAAAGTAAAAGATATATTTGATTGGATGGATATTCATGAAAAGAGACAAATTAAGTTGTTAAAATACAAATTAAAAAGGTGG
GACAACAACATGGTGGGATCAATTGTCATAAAAAAAAAGGAGGAAAATTGGCAAGAAGGGAATAAAAG
Protein sequenceShow/hide protein sequence
MKDTTETMCKRYHESSPLGLIAMVREECIETHGNVDIIKQIRETTSNLNFDEVMIGREVEVSNIVKLVIEFSKEHQISIIPIVGMRGLGNTTLAFNHESVKGHFDETIWL
CVWLNMKTPRNLVT