; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI04G03460 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G03460
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRibonuclease
Genome locationChr4:2118598..2121006
RNA-Seq ExpressionCSPI04G03460
SyntenyCSPI04G03460
Gene Ontology termsGO:0006298 - mismatch repair (biological process)
GO:0043137 - DNA replication, removal of RNA primer (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0032299 - ribonuclease H2 complex (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001352 - Ribonuclease HII/HIII
IPR004649 - Ribonuclease H2, subunit A
IPR012337 - Ribonuclease H-like superfamily
IPR023160 - Ribonuclease HII, helix-loop-helix cap domain superfamily
IPR024567 - Ribonuclease HII/HIII domain
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582048.1 Ribonuclease H2 subunit A, partial [Cucurbita argyrosperma subsp. sororia]1.2e-15793.6Show/hide
Query:  MSSQDSLPKWTSKPCVMGIDEAGRGPVLGPMVYGCLYCASSYMKQLSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN
        MSSQD LPKW SKPCVMGIDEAGRGPVLGPMVYGCLYC  SY+K+LSSLNFADSKTLKEEKREELFE LK NESIGWAVDVIDPRELSSKMLNKVKINLN
Subjt:  MSSQDSLPKWTSKPCVMGIDEAGRGPVLGPMVYGCLYCASSYMKQLSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHDSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
        EISHDSAMGLVTKVL MGVLLTEVYVDTVGDPEKYRIKLSEKFPN+KFVVAKKADSLYPVVSGASIVAKVTRDR LR+WALEETAENMHRNFGSGYPGDP
Subjt:  EISHDSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP

Query:  TTKCWLEDHKHSVFGFPTLVGFSWGTCTSYFKDVVEVSWLSDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESSGKGRCKFFQARKLEQLSRF
        TTKCWLEDHKHSVFGFPTLV FSWGTCTSYFKD+VEVSW SDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIES+ KGRCKFFQARKLEQL++F
Subjt:  TTKCWLEDHKHSVFGFPTLVGFSWGTCTSYFKDVVEVSWLSDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESSGKGRCKFFQARKLEQLSRF

XP_004152096.1 ribonuclease H2 subunit A [Cucumis sativus]8.1e-16598.99Show/hide
Query:  MSSQDSLPKWTSKPCVMGIDEAGRGPVLGPMVYGCLYCASSYMKQLSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN
        MSSQDSLPKWTSKPCVMGIDEAGRGPVLGPMVYGCLYCASSY+KQLSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN
Subjt:  MSSQDSLPKWTSKPCVMGIDEAGRGPVLGPMVYGCLYCASSYMKQLSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHDSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
        EISHDSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
Subjt:  EISHDSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP

Query:  TTKCWLEDHKHSVFGFPTLVGFSWGTCTSYFKDVVEVSWLSDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESSGKGRCKFFQARKLEQLSRF
        TTKCWLEDHKHSVFGFPTLV FSWGTCTSYFKDVVEVSW SDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESSGKGRCKFFQARKLEQLSRF
Subjt:  TTKCWLEDHKHSVFGFPTLVGFSWGTCTSYFKDVVEVSWLSDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESSGKGRCKFFQARKLEQLSRF

XP_008453982.1 PREDICTED: ribonuclease H2 subunit A isoform X1 [Cucumis melo]2.4e-16196.97Show/hide
Query:  MSSQDSLPKWTSKPCVMGIDEAGRGPVLGPMVYGCLYCASSYMKQLSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN
        MS QDSLPKW SKPCVMGIDEAGRGPVLGPMVYGCLYCASSY+K+LSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN
Subjt:  MSSQDSLPKWTSKPCVMGIDEAGRGPVLGPMVYGCLYCASSYMKQLSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHDSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
        EISH SAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
Subjt:  EISHDSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP

Query:  TTKCWLEDHKHSVFGFPTLVGFSWGTCTSYFKDVVEVSWLSDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESSGKGRCKFFQARKLEQLSRF
        TTKCWLEDHKHSVFGFPTLV FSWGTCTSYFKDVVEVSW SDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIES+ KGRCKFFQARKLEQLSRF
Subjt:  TTKCWLEDHKHSVFGFPTLVGFSWGTCTSYFKDVVEVSWLSDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESSGKGRCKFFQARKLEQLSRF

XP_022979887.1 ribonuclease H2 subunit A [Cucurbita maxima]3.6e-15793.27Show/hide
Query:  MSSQDSLPKWTSKPCVMGIDEAGRGPVLGPMVYGCLYCASSYMKQLSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN
        MSSQD LPKW SKPCVMGIDEAGRGPVLGPMVYGCLYC  SY+K+LSSLNFADSKTLKEEKREELFE LKANESIGWAVDVIDPRELSSKMLNKVKINLN
Subjt:  MSSQDSLPKWTSKPCVMGIDEAGRGPVLGPMVYGCLYCASSYMKQLSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHDSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
        EISHDSAMGLVTKVL MGVLLTEVYVDTVGDPEKYRIKLSEKFPN+KFVV+KKADSLYPVVSGASIVAKVTRDR LR+WALEETAENMHRNFGSGYPGDP
Subjt:  EISHDSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP

Query:  TTKCWLEDHKHSVFGFPTLVGFSWGTCTSYFKDVVEVSWLSDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESSGKGRCKFFQARKLEQLSRF
        TTKCWLEDHKHSVFGFP+LV FSWGTCTSYFKD+VEVSW SDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIES+ KGRCKFFQARKLEQL+ F
Subjt:  TTKCWLEDHKHSVFGFPTLVGFSWGTCTSYFKDVVEVSWLSDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESSGKGRCKFFQARKLEQLSRF

XP_023527419.1 ribonuclease H2 subunit A [Cucurbita pepo subsp. pepo]5.6e-15893.94Show/hide
Query:  MSSQDSLPKWTSKPCVMGIDEAGRGPVLGPMVYGCLYCASSYMKQLSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN
        MSSQD LPKW SKPCVMGIDEAGRGPVLGPMVYGCLYC  SY+K+LSSLNFADSKTLKEEKREELFE LKANESIGWAVDVIDPRELSSKMLNKVKINLN
Subjt:  MSSQDSLPKWTSKPCVMGIDEAGRGPVLGPMVYGCLYCASSYMKQLSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHDSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
        EISHDSAMGLVTKVL MGVLLTEVYVDTVGDPEKYRIKLSEKFPN+KFVVAKKADSLYPVVSGASIVAKVTRDR LR+WALEETAENMHRNFGSGYPGDP
Subjt:  EISHDSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP

Query:  TTKCWLEDHKHSVFGFPTLVGFSWGTCTSYFKDVVEVSWLSDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESSGKGRCKFFQARKLEQLSRF
        TTKCWLEDHKHSVFGFPTLV FSWGTCTSYFKD+VEVSW SDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIES+ KGRCKFFQARKLEQL+ F
Subjt:  TTKCWLEDHKHSVFGFPTLVGFSWGTCTSYFKDVVEVSWLSDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESSGKGRCKFFQARKLEQLSRF

TrEMBL top hitse value%identityAlignment
A0A0A0KTZ4 Ribonuclease3.9e-16598.99Show/hide
Query:  MSSQDSLPKWTSKPCVMGIDEAGRGPVLGPMVYGCLYCASSYMKQLSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN
        MSSQDSLPKWTSKPCVMGIDEAGRGPVLGPMVYGCLYCASSY+KQLSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN
Subjt:  MSSQDSLPKWTSKPCVMGIDEAGRGPVLGPMVYGCLYCASSYMKQLSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHDSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
        EISHDSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
Subjt:  EISHDSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP

Query:  TTKCWLEDHKHSVFGFPTLVGFSWGTCTSYFKDVVEVSWLSDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESSGKGRCKFFQARKLEQLSRF
        TTKCWLEDHKHSVFGFPTLV FSWGTCTSYFKDVVEVSW SDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESSGKGRCKFFQARKLEQLSRF
Subjt:  TTKCWLEDHKHSVFGFPTLVGFSWGTCTSYFKDVVEVSWLSDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESSGKGRCKFFQARKLEQLSRF

A0A1S3BXP1 Ribonuclease1.2e-16196.97Show/hide
Query:  MSSQDSLPKWTSKPCVMGIDEAGRGPVLGPMVYGCLYCASSYMKQLSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN
        MS QDSLPKW SKPCVMGIDEAGRGPVLGPMVYGCLYCASSY+K+LSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN
Subjt:  MSSQDSLPKWTSKPCVMGIDEAGRGPVLGPMVYGCLYCASSYMKQLSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHDSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
        EISH SAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
Subjt:  EISHDSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP

Query:  TTKCWLEDHKHSVFGFPTLVGFSWGTCTSYFKDVVEVSWLSDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESSGKGRCKFFQARKLEQLSRF
        TTKCWLEDHKHSVFGFPTLV FSWGTCTSYFKDVVEVSW SDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIES+ KGRCKFFQARKLEQLSRF
Subjt:  TTKCWLEDHKHSVFGFPTLVGFSWGTCTSYFKDVVEVSWLSDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESSGKGRCKFFQARKLEQLSRF

A0A5A7TT92 Ribonuclease1.2e-16196.97Show/hide
Query:  MSSQDSLPKWTSKPCVMGIDEAGRGPVLGPMVYGCLYCASSYMKQLSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN
        MS QDSLPKW SKPCVMGIDEAGRGPVLGPMVYGCLYCASSY+K+LSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN
Subjt:  MSSQDSLPKWTSKPCVMGIDEAGRGPVLGPMVYGCLYCASSYMKQLSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHDSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
        EISH SAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
Subjt:  EISHDSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP

Query:  TTKCWLEDHKHSVFGFPTLVGFSWGTCTSYFKDVVEVSWLSDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESSGKGRCKFFQARKLEQLSRF
        TTKCWLEDHKHSVFGFPTLV FSWGTCTSYFKDVVEVSW SDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIES+ KGRCKFFQARKLEQLSRF
Subjt:  TTKCWLEDHKHSVFGFPTLVGFSWGTCTSYFKDVVEVSWLSDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESSGKGRCKFFQARKLEQLSRF

A0A6J1GTR5 Ribonuclease3.0e-15793.27Show/hide
Query:  MSSQDSLPKWTSKPCVMGIDEAGRGPVLGPMVYGCLYCASSYMKQLSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN
        MSSQD LPKW SKPCVMGIDEAGRGPVLGPMVYGCLYC  SY+K+LSSLNFADSK LKEEKREELFE LK NESIGWAVDVIDPRELSSKMLNKVKINLN
Subjt:  MSSQDSLPKWTSKPCVMGIDEAGRGPVLGPMVYGCLYCASSYMKQLSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHDSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
        EISHDSAMGLVTKVL MGVLLTEVYVDTVGDPEKYRIKLSEKFPN+KFVVAKKADSLYPVVSGASIVAKVTRDR LR+WALEETAENMHRNFGSGYPGDP
Subjt:  EISHDSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP

Query:  TTKCWLEDHKHSVFGFPTLVGFSWGTCTSYFKDVVEVSWLSDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESSGKGRCKFFQARKLEQLSRF
        TTKCWLEDHKHSVFGFPTLV FSWGTCTSYFKD+VEVSW SDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIES+ KGRCKFFQARKLEQL+ F
Subjt:  TTKCWLEDHKHSVFGFPTLVGFSWGTCTSYFKDVVEVSWLSDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESSGKGRCKFFQARKLEQLSRF

A0A6J1IPY0 Ribonuclease1.8e-15793.27Show/hide
Query:  MSSQDSLPKWTSKPCVMGIDEAGRGPVLGPMVYGCLYCASSYMKQLSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN
        MSSQD LPKW SKPCVMGIDEAGRGPVLGPMVYGCLYC  SY+K+LSSLNFADSKTLKEEKREELFE LKANESIGWAVDVIDPRELSSKMLNKVKINLN
Subjt:  MSSQDSLPKWTSKPCVMGIDEAGRGPVLGPMVYGCLYCASSYMKQLSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHDSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
        EISHDSAMGLVTKVL MGVLLTEVYVDTVGDPEKYRIKLSEKFPN+KFVV+KKADSLYPVVSGASIVAKVTRDR LR+WALEETAENMHRNFGSGYPGDP
Subjt:  EISHDSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP

Query:  TTKCWLEDHKHSVFGFPTLVGFSWGTCTSYFKDVVEVSWLSDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESSGKGRCKFFQARKLEQLSRF
        TTKCWLEDHKHSVFGFP+LV FSWGTCTSYFKD+VEVSW SDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIES+ KGRCKFFQARKLEQL+ F
Subjt:  TTKCWLEDHKHSVFGFPTLVGFSWGTCTSYFKDVVEVSWLSDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESSGKGRCKFFQARKLEQLSRF

SwissProt top hitse value%identityAlignment
O75792 Ribonuclease H2 subunit A2.2e-6451.32Show/hide
Query:  KPCVMGIDEAGRGPVLGPMVYGCLYCASSYMKQLSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVT
        +PCV+G+DEAGRGPVLGPMVY   YC    +  L +L  ADSKTL E +RE LF  ++  + +GWA+DV+ P  +S+ ML +VK NLN +SHD+A GL+ 
Subjt:  KPCVMGIDEAGRGPVLGPMVYGCLYCASSYMKQLSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVT

Query:  KVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHS
          L  GV +T+V+VDTVG PE Y+ +L + FP I+  V  KAD+LYPVVS ASI AKV RD+A+++W   E  +++  ++GSGYP DP TK WL++H   
Subjt:  KVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHS

Query:  VFGFPTLVGFSWGTC-TSYFKDVVEVSW
        VFGFP  V FSW T  T   K+  +V W
Subjt:  VFGFPTLVGFSWGTC-TSYFKDVVEVSW

Q2TBT5 Ribonuclease H2 subunit A2.4e-6349.41Show/hide
Query:  PKWTSKPCVMGIDEAGRGPVLGPMVYGCLYCASSYMKQLSSLNFADSKTLKEEKREELFEDLKAN-ESIGWAVDVIDPRELSSKMLNKVKINLNEISHDS
        P    +PCV+G+DEAGRGPVLGPMVY   YC  S ++ L +L  ADSKTL E +R+ LF  ++ + + +GWA+DV+ P  +S+ ML +VK NLN +SHD+
Subjt:  PKWTSKPCVMGIDEAGRGPVLGPMVYGCLYCASSYMKQLSSLNFADSKTLKEEKREELFEDLKAN-ESIGWAVDVIDPRELSSKMLNKVKINLNEISHDS

Query:  AMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWL
        A GLV   L  GV + +V+VDTVG PE Y+ +L ++FP I+  V  KAD+LYPVVS ASI AKV RD+A++ W   E  +++  ++GSGYP DP TK WL
Subjt:  AMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWL

Query:  EDHKHSVFGFPTLVGFSWGTCTSYFKDVVE-VSWLSDKVDEDGATG---GSGK
          H   VFGFP  V FSW T  S  +   E V W      ED  TG   G GK
Subjt:  EDHKHSVFGFPTLVGFSWGTCTSYFKDVVE-VSWLSDKVDEDGATG---GSGK

Q5U209 Ribonuclease H2 subunit A2.2e-6448.95Show/hide
Query:  KPCVMGIDEAGRGPVLGPMVYGCLYCASSYMKQLSSLNFADSKTLKEEKREELFEDLKAN-ESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLV
        +PCV+G+DEAGRGPVLGPMVY   YC  S +  L +L  ADSKTL E +RE LF  ++ + + +GWA+D++ P  +S+ ML +VK NLN +SHD+A GL+
Subjt:  KPCVMGIDEAGRGPVLGPMVYGCLYCASSYMKQLSSLNFADSKTLKEEKREELFEDLKAN-ESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLV

Query:  TKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKH
           +   V +T+V+VDTVG PE Y+ +L ++FP I+  V  KADSL+PVVS ASI+AKV RD+A++ W   E+ + +  ++GSGYP DP TK WL  H  
Subjt:  TKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKH

Query:  SVFGFPTLVGFSWGTCTSYF-KDVVEVSWLSDKVDED
         VFGFP  V FSW T  +   K+   V+W     +ED
Subjt:  SVFGFPTLVGFSWGTCTSYF-KDVVEVSWLSDKVDED

Q9CWY8 Ribonuclease H2 subunit A4.9e-6449.79Show/hide
Query:  KPCVMGIDEAGRGPVLGPMVYGCLYCASSYMKQLSSLNFADSKTLKEEKREELFEDLKAN-ESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLV
        +PCV+G+DEAGRGPVLGPMVY   YC  S +  L +L  ADSKTL E +RE LF  ++ + + +GWA+DV+ P  +S+ ML +VK NLN +SHD+A GL+
Subjt:  KPCVMGIDEAGRGPVLGPMVYGCLYCASSYMKQLSSLNFADSKTLKEEKREELFEDLKAN-ESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLV

Query:  TKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKH
           L   V +T+V+VDTVG PE Y+ +L + FP I+  V  KADSL+PVVS ASI AKV RD+A++ W   E  +++  ++GSGYP DP TK WL  H  
Subjt:  TKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKH

Query:  SVFGFPTLVGFSWGTCTSYF-KDVVEVSWLSDKVDED
         VFGFP  V FSW T  +   K+  +V W   + +ED
Subjt:  SVFGFPTLVGFSWGTCTSYF-KDVVEVSWLSDKVDED

Q9SEZ6 Ribonuclease H2 subunit A2.7e-12371.38Show/hide
Query:  MSSQDSLPKWTSKPCVMGIDEAGRGPVLGPMVYGCLYCASSYMKQLSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN
        M S+   P+W S+PC+MGIDEAGRGPVLGPMVYGC+YC  SY   L+SL+FADSKTLKEEKREEL+E LK ++S+GWAVDVIDPRELS+KML K K NLN
Subjt:  MSSQDSLPKWTSKPCVMGIDEAGRGPVLGPMVYGCLYCASSYMKQLSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHDSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
        EISH+SAMGL+ +VL MGVLLTE Y+DTVGDP+KYRIKLSE+FP+IKFVV+KKADSL+P+VSGASIVAKVTRDRAL+EW +EET E+++RNFGSGYPGDP
Subjt:  EISHDSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP

Query:  TTKCWLEDHKHSVFGFPTLVGFSWGTCTSYFKDVVEVSWLSDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESSGKGRCKFFQARKLEQLSRF
         TK WL  HKHSVFGFP+LV FSWGTCT++ K  VEV+W +D+ +E G  G S K+Q +LS+ G  T +++SEEIESSGKGRCKF QARK++QL++F
Subjt:  TTKCWLEDHKHSVFGFPTLVGFSWGTCTSYFKDVVEVSWLSDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESSGKGRCKFFQARKLEQLSRF

Arabidopsis top hitse value%identityAlignment
AT2G25100.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.9e-12471.38Show/hide
Query:  MSSQDSLPKWTSKPCVMGIDEAGRGPVLGPMVYGCLYCASSYMKQLSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN
        M S+   P+W S+PC+MGIDEAGRGPVLGPMVYGC+YC  SY   L+SL+FADSKTLKEEKREEL+E LK ++S+GWAVDVIDPRELS+KML K K NLN
Subjt:  MSSQDSLPKWTSKPCVMGIDEAGRGPVLGPMVYGCLYCASSYMKQLSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHDSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
        EISH+SAMGL+ +VL MGVLLTE Y+DTVGDP+KYRIKLSE+FP+IKFVV+KKADSL+P+VSGASIVAKVTRDRAL+EW +EET E+++RNFGSGYPGDP
Subjt:  EISHDSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP

Query:  TTKCWLEDHKHSVFGFPTLVGFSWGTCTSYFKDVVEVSWLSDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESSGKGRCKFFQARKLEQLSRF
         TK WL  HKHSVFGFP+LV FSWGTCT++ K  VEV+W +D+ +E G  G S K+Q +LS+ G  T +++SEEIESSGKGRCKF QARK++QL++F
Subjt:  TTKCWLEDHKHSVFGFPTLVGFSWGTCTSYFKDVVEVSWLSDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESSGKGRCKFFQARKLEQLSRF

AT2G25100.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.2e-11367Show/hide
Query:  MSSQDSLPKWTSKPCVMGIDEAGRGPVLGPMVYGCLYCASSYMKQLSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN
        M S+   P+W S+PC+MGIDEAGRGPVLGPMVYGC+YC  SY   L+SL+FADSKTLKEEKREEL+E LK ++S+GWAVDVIDPRELS+KML        
Subjt:  MSSQDSLPKWTSKPCVMGIDEAGRGPVLGPMVYGCLYCASSYMKQLSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHDSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
                    KVL MGVLLTE Y+DTVGDP+KYRIKLSE+FP+IKFVV+KKADSL+P+VSGASIVAKVTRDRAL+EW +EET E+++RNFGSGYPGDP
Subjt:  EISHDSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP

Query:  TTKCWLEDHKHSVFGFPTLVGFSWGTCTSYFKDVVEVSWLSDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESSGKGRCKFFQARKLEQLSRF
         TK WL  HKHSVFGFP+LV FSWGTCT++ K  VEV+W +D+ +E G  G S K+Q +LS+ G  T +++SEEIESSGKGRCKF QARK++QL++F
Subjt:  TTKCWLEDHKHSVFGFPTLVGFSWGTCTSYFKDVVEVSWLSDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESSGKGRCKFFQARKLEQLSRF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCTCAAGATTCACTCCCAAAATGGACTTCCAAGCCTTGTGTAATGGGCATAGATGAAGCTGGTCGAGGCCCTGTTTTAGGTCCAATGGTGTATGGATGTTTGTA
CTGCGCCAGTTCCTATATGAAACAACTTTCGTCTTTGAATTTTGCAGACTCGAAAACTTTGAAAGAAGAGAAGAGGGAGGAATTGTTTGAAGATTTGAAGGCTAATGAGT
CAATTGGATGGGCTGTTGATGTCATTGATCCTCGAGAACTTTCTTCGAAGATGCTAAATAAAGTAAAGATCAACCTAAATGAAATATCACATGACTCTGCAATGGGTCTG
GTCACCAAGGTTCTAAGCATGGGAGTTCTTTTAACTGAGGTTTATGTGGATACTGTTGGAGATCCTGAAAAGTACAGGATCAAGTTGTCTGAAAAATTTCCTAATATAAA
ATTTGTAGTTGCAAAGAAAGCTGATAGCTTGTATCCTGTTGTCAGTGGGGCAAGCATAGTCGCAAAGGTCACAAGAGATCGTGCATTGCGGGAATGGGCATTGGAGGAAA
CAGCTGAAAACATGCATAGAAACTTTGGTTCTGGATACCCTGGAGATCCAACAACTAAATGTTGGTTAGAAGATCACAAGCACTCGGTATTTGGGTTCCCTACACTAGTC
GGCTTCAGTTGGGGTACCTGCACTTCATATTTCAAAGATGTTGTTGAAGTATCATGGTTATCGGATAAAGTGGATGAAGATGGGGCAACGGGTGGGAGTGGTAAGAAACA
ATTAAGATTAAGCAATGTTGGCATCACCACATCCAAGAGAAAGAGTGAAGAAATTGAATCAAGTGGCAAAGGACGGTGCAAGTTTTTCCAGGCTAGAAAACTTGAACAAC
TCTCTCGTTTT
mRNA sequenceShow/hide mRNA sequence
ATGTCTTCTCAAGATTCACTCCCAAAATGGACTTCCAAGCCTTGTGTAATGGGCATAGATGAAGCTGGTCGAGGCCCTGTTTTAGGTCCAATGGTGTATGGATGTTTGTA
CTGCGCCAGTTCCTATATGAAACAACTTTCGTCTTTGAATTTTGCAGACTCGAAAACTTTGAAAGAAGAGAAGAGGGAGGAATTGTTTGAAGATTTGAAGGCTAATGAGT
CAATTGGATGGGCTGTTGATGTCATTGATCCTCGAGAACTTTCTTCGAAGATGCTAAATAAAGTAAAGATCAACCTAAATGAAATATCACATGACTCTGCAATGGGTCTG
GTCACCAAGGTTCTAAGCATGGGAGTTCTTTTAACTGAGGTTTATGTGGATACTGTTGGAGATCCTGAAAAGTACAGGATCAAGTTGTCTGAAAAATTTCCTAATATAAA
ATTTGTAGTTGCAAAGAAAGCTGATAGCTTGTATCCTGTTGTCAGTGGGGCAAGCATAGTCGCAAAGGTCACAAGAGATCGTGCATTGCGGGAATGGGCATTGGAGGAAA
CAGCTGAAAACATGCATAGAAACTTTGGTTCTGGATACCCTGGAGATCCAACAACTAAATGTTGGTTAGAAGATCACAAGCACTCGGTATTTGGGTTCCCTACACTAGTC
GGCTTCAGTTGGGGTACCTGCACTTCATATTTCAAAGATGTTGTTGAAGTATCATGGTTATCGGATAAAGTGGATGAAGATGGGGCAACGGGTGGGAGTGGTAAGAAACA
ATTAAGATTAAGCAATGTTGGCATCACCACATCCAAGAGAAAGAGTGAAGAAATTGAATCAAGTGGCAAAGGACGGTGCAAGTTTTTCCAGGCTAGAAAACTTGAACAAC
TCTCTCGTTTT
Protein sequenceShow/hide protein sequence
MSSQDSLPKWTSKPCVMGIDEAGRGPVLGPMVYGCLYCASSYMKQLSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGL
VTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLV
GFSWGTCTSYFKDVVEVSWLSDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESSGKGRCKFFQARKLEQLSRF