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CSPI04G03860 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G03860
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionAconitate hydratase
Genome locationChr4:2405930..2407215
RNA-Seq ExpressionCSPI04G03860
SyntenyCSPI04G03860
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044639.1 Aconitate hydratase [Cucumis melo var. makuwa]1.3e-1983.87Show/hide
Query:  MATGRVLFHSTSLHADFETINMDGKNRDGSRFLSSALPRGGNYINKPHAAEKAAVGRAGYQP
        MATGR L +STSLH DFET+NMDGKNRDGSR LS+ALPRGGNYIN PHAAEKAAV R+GYQP
Subjt:  MATGRVLFHSTSLHADFETINMDGKNRDGSRFLSSALPRGGNYINKPHAAEKAAVGRAGYQP

KAG6600180.1 hypothetical protein SDJN03_05413, partial [Cucurbita argyrosperma subsp. sororia]2.0e-1256.1Show/hide
Query:  MGLKRESIFFSVMLLLLLSNMATGRVLFHSTSLHADFETINMDGKNRDGSRFLSSALPRGGNYINKPHAAEKAAVGRAGYQP
        MGLKR  I  SVM+L+L+ +MATGR +  +T   ADFET+NM G+   G++ LSSA PRGGNYI+ P AA KAA+  +GY P
Subjt:  MGLKRESIFFSVMLLLLLSNMATGRVLFHSTSLHADFETINMDGKNRDGSRFLSSALPRGGNYINKPHAAEKAAVGRAGYQP

KGN53132.1 hypothetical protein Csa_014795 [Cucumis sativus]3.4e-3698.78Show/hide
Query:  MGLKRESIFFSVMLLLLLSNMATGRVLFHSTSLHADFETINMDGKNRDGSRFLSSALPRGGNYINKPHAAEKAAVGRAGYQP
        MGLKRESIFFSVMLLLLLSNMATGRVLFHSTSLHADFET+NMDGKNRDGSRFLSSALPRGGNYINKPHAAEKAAVGRAGYQP
Subjt:  MGLKRESIFFSVMLLLLLSNMATGRVLFHSTSLHADFETINMDGKNRDGSRFLSSALPRGGNYINKPHAAEKAAVGRAGYQP

TrEMBL top hitse value%identityAlignment
A0A0A0KXI8 Aconitate hydratase1.6e-3698.78Show/hide
Query:  MGLKRESIFFSVMLLLLLSNMATGRVLFHSTSLHADFETINMDGKNRDGSRFLSSALPRGGNYINKPHAAEKAAVGRAGYQP
        MGLKRESIFFSVMLLLLLSNMATGRVLFHSTSLHADFET+NMDGKNRDGSRFLSSALPRGGNYINKPHAAEKAAVGRAGYQP
Subjt:  MGLKRESIFFSVMLLLLLSNMATGRVLFHSTSLHADFETINMDGKNRDGSRFLSSALPRGGNYINKPHAAEKAAVGRAGYQP

A0A5A7TTS9 Aconitate hydratase6.3e-2083.87Show/hide
Query:  MATGRVLFHSTSLHADFETINMDGKNRDGSRFLSSALPRGGNYINKPHAAEKAAVGRAGYQP
        MATGR L +STSLH DFET+NMDGKNRDGSR LS+ALPRGGNYIN PHAAEKAAV R+GYQP
Subjt:  MATGRVLFHSTSLHADFETINMDGKNRDGSRFLSSALPRGGNYINKPHAAEKAAVGRAGYQP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTTAAAGAGAGAGTCCATATTTTTTAGTGTTATGCTTCTTCTTCTTCTTTCAAATATGGCAACAGGGAGAGTACTCTTCCATTCTACTTCACTTCATGCAGATTT
TGAGACGATCAATATGGATGGGAAGAATAGGGATGGGAGTCGTTTTCTGAGTTCGGCTCTGCCTCGAGGTGGCAACTATATTAACAAACCCCATGCAGCAGAGAAGGCTG
CGGTTGGACGCGCCGGCTACCAACCATGA
mRNA sequenceShow/hide mRNA sequence
CGAAAAGAGAGAAAAGGTTTATAGAAAGAGAGTTTGAGGTCAATGGGTTTAAAGAGAGAGTCCATATTTTTTAGTGTTATGCTTCTTCTTCTTCTTTCAAATATGGCAAC
AGGGAGAGTACTCTTCCATTCTACTTCACTTCATGCAGATTTTGAGACGATCAATATGGATGGGAAGAATAGGGATGGGAGTCGTTTTCTGAGTTCGGCTCTGCCTCGAG
GTGGCAACTATATTAACAAACCCCATGCAGCAGAGAAGGCTGCGGTTGGACGCGCCGGCTACCAACCATGACGGCTATGGAAAATTGGTTATGAGAGAGTGTAGTACTTC
ATGATGATCATATATAATATAAATACACTGTGGCTGAAGTATCATGAATAAAAACATGGGTTTTAAGTCAACAACGTAAGCATTTTTATTTGTGAATGTTGTCTCAAATT
AGTGTTTGACATGATGATATATACCATGAAACGTTTTGTAGTAGAATTATATTTTTGAAGTGATGCTGTTGATTTGGAGAAATTGGGCCAAAGTTATAGACAAAATATGG
AAAAGTTGGGAGAACAGTGAAAGAGTTTGGACTTCAAACTCTAAGAAGCAAAGCATTGATGTATGAAGTATGGTAATATGATGCTTATTATTCAAGAAAAAAGTAATTCC
GTGTGGAAGACCAAATACAAAGGAAATTAAGAATCATAACAATGTCGATCATAACAGACCGAG
Protein sequenceShow/hide protein sequence
MGLKRESIFFSVMLLLLLSNMATGRVLFHSTSLHADFETINMDGKNRDGSRFLSSALPRGGNYINKPHAAEKAAVGRAGYQP