; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI04G04270 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G04270
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionglycine-rich cell wall structural protein 2
Genome locationChr4:2785093..2785958
RNA-Seq ExpressionCSPI04G04270
SyntenyCSPI04G04270
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146895.1 glycine-rich cell wall structural protein 2 [Cucumis sativus]1.6e-77100Show/hide
Query:  MKEPSKFHLSSLFFLLFVLTSSSTVSCGATPRKLLNFPDMSWGSPSGGGGGGNGNPTGAYGSGHGPNWDYNWGWGSSPGSGWGFGSGSGRSPTGFGKGYG
        MKEPSKFHLSSLFFLLFVLTSSSTVSCGATPRKLLNFPDMSWGSPSGGGGGGNGNPTGAYGSGHGPNWDYNWGWGSSPGSGWGFGSGSGRSPTGFGKGYG
Subjt:  MKEPSKFHLSSLFFLLFVLTSSSTVSCGATPRKLLNFPDMSWGSPSGGGGGGNGNPTGAYGSGHGPNWDYNWGWGSSPGSGWGFGSGSGRSPTGFGKGYG

Query:  YGFGSGSGSGSGYGYGSGSGGAHGGGYGSGSGYGNSGGGGSGGGYGGPSGDEYRSPMTTRDKNRQG
        YGFGSGSGSGSGYGYGSGSGGAHGGGYGSGSGYGNSGGGGSGGGYGGPSGDEYRSPMTTRDKNRQG
Subjt:  YGFGSGSGSGSGYGYGSGSGGAHGGGYGSGSGYGNSGGGGSGGGYGGPSGDEYRSPMTTRDKNRQG

XP_016901488.1 PREDICTED: glycine-rich cell wall structural protein 2 [Cucumis melo]3.8e-7195.18Show/hide
Query:  MKEPSKFHLSSLFFLLFVLTSSSTVSCGATPRKLLNFPDMSWGSPSGGGGGGNGNPTGAYGSGHGPNWDYNWGWGSSPGSGWGFGSGSGRSPTGFGKGYG
        MK+PSKFHLSSLFFLLFVLTSSSTVS  ATPRKLLNFPDMSWGSP+ GGGGGNGNPTGAYGSGH PNWDYNWGWGSSPGSGWGFGSGSGRSPTGFGKGYG
Subjt:  MKEPSKFHLSSLFFLLFVLTSSSTVSCGATPRKLLNFPDMSWGSPSGGGGGGNGNPTGAYGSGHGPNWDYNWGWGSSPGSGWGFGSGSGRSPTGFGKGYG

Query:  YGFGSGSGSGSGYGYGSGSGGAHGGGYGSGSGYGNSGGGGSGGGYGGPSGDEYRSPMTTRDKNRQG
        YGFGSGSGSGSGYGYGSGSGGAHGGGYGSGSGYGNSGGGG GGGYGGPSGDEYRSP TTRDKNRQG
Subjt:  YGFGSGSGSGSGYGYGSGSGGAHGGGYGSGSGYGNSGGGGSGGGYGGPSGDEYRSPMTTRDKNRQG

XP_022922583.1 glycine-rich cell wall structural protein 2-like [Cucurbita moschata]3.1e-4974.14Show/hide
Query:  MKEPSKFHLSSLFFLLFVLTSSSTVSCGATPRKLLNFPDMSWGSPSGGGGGGNGNPTGAYGSGHGPNWDYNWGWGSSPGSGWGFGSGSGRSPTGFGKGYG
        MK+PS FHLS LFFLLF +T+SS V      RKLLN PDM WGSP+GG     GNPTG YGS HGPNWDYNWGWGSSPGSGWG+GSGSGRSPTGFGKGYG
Subjt:  MKEPSKFHLSSLFFLLFVLTSSSTVSCGATPRKLLNFPDMSWGSPSGGGGGGNGNPTGAYGSGHGPNWDYNWGWGSSPGSGWGFGSGSGRSPTGFGKGYG

Query:  YGFGSGSGSGSGYGYGSGSGGAHGGGYGSGSGYGNSG--------GGGSGGGYGGPSGDEYRSPMTTRDKNRQG
        YGFGSGSGSGSGYGYGSG GGAHGGGYGSGSGYGNSG        GG SGGGYG  SG EY     T+DK+R G
Subjt:  YGFGSGSGSGSGYGYGSGSGGAHGGGYGSGSGYGNSG--------GGGSGGGYGGPSGDEYRSPMTTRDKNRQG

XP_023553046.1 keratin-associated protein 21-1-like [Cucurbita pepo subsp. pepo]5.9e-4874.14Show/hide
Query:  MKEPSKFHLSSLFFLLFVLTSSSTVSCGATPRKLLNFPDMSWGSPSGGGGGGNGNPTGAYGSGHGPNWDYNWGWGSSPGSGWGFGSGSGRSPTGFGKGYG
        MK+PS FHLS LFFLLF +T+SS V      RKLLN PDM WGSP+GG     GNPTG YGS HGPNWDYNWGWGSSPGSGWG+GSGSGRSPTGFGKGYG
Subjt:  MKEPSKFHLSSLFFLLFVLTSSSTVSCGATPRKLLNFPDMSWGSPSGGGGGGNGNPTGAYGSGHGPNWDYNWGWGSSPGSGWGFGSGSGRSPTGFGKGYG

Query:  YGFGSGSGSGSGYGYGSGSGGAHGGGYGSGSGYGNS-----GGG---GSGGGYGGPSGDEYRSPMTTRDKNRQG
        YGFGSGSGSGSGYGYGSG GGAHGGGYGSGSGYGNS     GGG    SGGGYG  SG EY     T+DK+R G
Subjt:  YGFGSGSGSGSGYGYGSGSGGAHGGGYGSGSGYGNS-----GGG---GSGGGYGGPSGDEYRSPMTTRDKNRQG

XP_038899364.1 glycine-rich cell wall structural protein 2-like [Benincasa hispida]3.6e-6186.67Show/hide
Query:  MKEPSKFHLSSLFFLLFVLT-SSSTVSCGATPRKLLNFPDMSWGSPSGGGGGGNGNPTGAYGSGHGPNWDYNWGWGSSPGSGWGFGSGSGRSPTGFGKGY
        MK+PS FHL SLFFLLFV+T +SSTVS  AT RKLLNFPDMSWGSP+GGGGG  GNPTGAYGS HGPNWDYNWGWGSSPGSGWG+GSGSGRSPTGFGKGY
Subjt:  MKEPSKFHLSSLFFLLFVLT-SSSTVSCGATPRKLLNFPDMSWGSPSGGGGGGNGNPTGAYGSGHGPNWDYNWGWGSSPGSGWGFGSGSGRSPTGFGKGY

Query:  GYGFGSGSGSGSGYGYGSGSGGAHGGGYGSGSGYGNSGGGGSGGGYGGPSGDEYRSPMTTRDKNR
        GYG+G GSGSGSG+GYGSGSGGAHGGGYGSGSGYGNSGG GSGGGYGGP+G+EYRSP TT+DKNR
Subjt:  GYGFGSGSGSGSGYGYGSGSGGAHGGGYGSGSGYGNSGGGGSGGGYGGPSGDEYRSPMTTRDKNR

TrEMBL top hitse value%identityAlignment
A0A0A0KXP2 Uncharacterized protein7.8e-78100Show/hide
Query:  MKEPSKFHLSSLFFLLFVLTSSSTVSCGATPRKLLNFPDMSWGSPSGGGGGGNGNPTGAYGSGHGPNWDYNWGWGSSPGSGWGFGSGSGRSPTGFGKGYG
        MKEPSKFHLSSLFFLLFVLTSSSTVSCGATPRKLLNFPDMSWGSPSGGGGGGNGNPTGAYGSGHGPNWDYNWGWGSSPGSGWGFGSGSGRSPTGFGKGYG
Subjt:  MKEPSKFHLSSLFFLLFVLTSSSTVSCGATPRKLLNFPDMSWGSPSGGGGGGNGNPTGAYGSGHGPNWDYNWGWGSSPGSGWGFGSGSGRSPTGFGKGYG

Query:  YGFGSGSGSGSGYGYGSGSGGAHGGGYGSGSGYGNSGGGGSGGGYGGPSGDEYRSPMTTRDKNRQG
        YGFGSGSGSGSGYGYGSGSGGAHGGGYGSGSGYGNSGGGGSGGGYGGPSGDEYRSPMTTRDKNRQG
Subjt:  YGFGSGSGSGSGYGYGSGSGGAHGGGYGSGSGYGNSGGGGSGGGYGGPSGDEYRSPMTTRDKNRQG

A0A1S4DZT0 glycine-rich cell wall structural protein 21.8e-7195.18Show/hide
Query:  MKEPSKFHLSSLFFLLFVLTSSSTVSCGATPRKLLNFPDMSWGSPSGGGGGGNGNPTGAYGSGHGPNWDYNWGWGSSPGSGWGFGSGSGRSPTGFGKGYG
        MK+PSKFHLSSLFFLLFVLTSSSTVS  ATPRKLLNFPDMSWGSP+ GGGGGNGNPTGAYGSGH PNWDYNWGWGSSPGSGWGFGSGSGRSPTGFGKGYG
Subjt:  MKEPSKFHLSSLFFLLFVLTSSSTVSCGATPRKLLNFPDMSWGSPSGGGGGGNGNPTGAYGSGHGPNWDYNWGWGSSPGSGWGFGSGSGRSPTGFGKGYG

Query:  YGFGSGSGSGSGYGYGSGSGGAHGGGYGSGSGYGNSGGGGSGGGYGGPSGDEYRSPMTTRDKNRQG
        YGFGSGSGSGSGYGYGSGSGGAHGGGYGSGSGYGNSGGGG GGGYGGPSGDEYRSP TTRDKNRQG
Subjt:  YGFGSGSGSGSGYGYGSGSGGAHGGGYGSGSGYGNSGGGGSGGGYGGPSGDEYRSPMTTRDKNRQG

A0A5A7TRC6 Glycine-rich cell wall structural protein 21.8e-7195.18Show/hide
Query:  MKEPSKFHLSSLFFLLFVLTSSSTVSCGATPRKLLNFPDMSWGSPSGGGGGGNGNPTGAYGSGHGPNWDYNWGWGSSPGSGWGFGSGSGRSPTGFGKGYG
        MK+PSKFHLSSLFFLLFVLTSSSTVS  ATPRKLLNFPDMSWGSP+ GGGGGNGNPTGAYGSGH PNWDYNWGWGSSPGSGWGFGSGSGRSPTGFGKGYG
Subjt:  MKEPSKFHLSSLFFLLFVLTSSSTVSCGATPRKLLNFPDMSWGSPSGGGGGGNGNPTGAYGSGHGPNWDYNWGWGSSPGSGWGFGSGSGRSPTGFGKGYG

Query:  YGFGSGSGSGSGYGYGSGSGGAHGGGYGSGSGYGNSGGGGSGGGYGGPSGDEYRSPMTTRDKNRQG
        YGFGSGSGSGSGYGYGSGSGGAHGGGYGSGSGYGNSGGGG GGGYGGPSGDEYRSP TTRDKNRQG
Subjt:  YGFGSGSGSGSGYGYGSGSGGAHGGGYGSGSGYGNSGGGGSGGGYGGPSGDEYRSPMTTRDKNRQG

A0A6J1E737 glycine-rich cell wall structural protein 2-like1.5e-4974.14Show/hide
Query:  MKEPSKFHLSSLFFLLFVLTSSSTVSCGATPRKLLNFPDMSWGSPSGGGGGGNGNPTGAYGSGHGPNWDYNWGWGSSPGSGWGFGSGSGRSPTGFGKGYG
        MK+PS FHLS LFFLLF +T+SS V      RKLLN PDM WGSP+GG     GNPTG YGS HGPNWDYNWGWGSSPGSGWG+GSGSGRSPTGFGKGYG
Subjt:  MKEPSKFHLSSLFFLLFVLTSSSTVSCGATPRKLLNFPDMSWGSPSGGGGGGNGNPTGAYGSGHGPNWDYNWGWGSSPGSGWGFGSGSGRSPTGFGKGYG

Query:  YGFGSGSGSGSGYGYGSGSGGAHGGGYGSGSGYGNSG--------GGGSGGGYGGPSGDEYRSPMTTRDKNRQG
        YGFGSGSGSGSGYGYGSG GGAHGGGYGSGSGYGNSG        GG SGGGYG  SG EY     T+DK+R G
Subjt:  YGFGSGSGSGSGYGYGSGSGGAHGGGYGSGSGYGNSG--------GGGSGGGYGGPSGDEYRSPMTTRDKNRQG

A0A6J1J236 glycine-rich cell wall structural protein 2-like2.9e-4873.56Show/hide
Query:  MKEPSKFHLSSLFFLLFVLTSSSTVSCGATPRKLLNFPDMSWGSPSGGGGGGNGNPTGAYGSGHGPNWDYNWGWGSSPGSGWGFGSGSGRSPTGFGKGYG
        MK+PS FHLS LFFLLF +T SS V      RKLLN PDM WGSP+GG     GNPTG YGS HGPNWDYNWGWGSSPGSGWG+GSGSGRS TGFGKGYG
Subjt:  MKEPSKFHLSSLFFLLFVLTSSSTVSCGATPRKLLNFPDMSWGSPSGGGGGGNGNPTGAYGSGHGPNWDYNWGWGSSPGSGWGFGSGSGRSPTGFGKGYG

Query:  YGFGSGSGSGSGYGYGSGSGGAHGGGYGSGSGYGNSG--------GGGSGGGYGGPSGDEYRSPMTTRDKNRQG
        YGFGSGSGSGSGYGYGSG GGAHGGGYGSGSGYGNSG        GG SGGGYG  SG EY     T+DK+R G
Subjt:  YGFGSGSGSGSGYGYGSGSGGAHGGGYGSGSGYGNSG--------GGGSGGGYGGPSGDEYRSPMTTRDKNRQG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G36120.1 Glycine-rich protein family4.3e-0447.22Show/hide
Query:  GSPSGGGGGGNGNPTGAYGSGHGPNWDYNWGWGSSPGSGWGFGSGSGRSPTGFGKGYGYGFGSGSGSGSGYGYGSGSGGAHGGGYGSGSGYGNSGGGGSG
        G   G GGGG G P G YG G G      +G G + G G G G G+G    G G  +G G+G G G+G+G GYG G  G HGGG G G+G G  GG G G
Subjt:  GSPSGGGGGGNGNPTGAYGSGHGPNWDYNWGWGSSPGSGWGFGSGSGRSPTGFGKGYGYGFGSGSGSGSGYGYGSGSGGAHGGGYGSGSGYGNSGGGGSG

Query:  GGYGGPSG
        G +GG  G
Subjt:  GGYGGPSG

AT5G61660.1 glycine-rich protein3.4e-2576.6Show/hide
Query:  GNPTGAYGSGHGPNWDYNWGWGSSPGSGWGFGSGSGRSPTGFGKGYGYGFGSGSGSGSGYGYGSGSGGAHGGGYGSGSGYGNSGGGGSGGGYGG
        GN  G  GSG GPNW+YNWGWGS+PGSGWG+G+GSGRSPTG+G+G GYG+GSGSGSG+GYGYGSG GGA GGGYG GSG G SGGGG GGG+ G
Subjt:  GNPTGAYGSGHGPNWDYNWGWGSSPGSGWGFGSGSGRSPTGFGKGYGYGFGSGSGSGSGYGYGSGSGGAHGGGYGSGSGYGNSGGGGSGGGYGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGAACCATCTAAATTCCATCTCTCATCTCTCTTCTTTCTTCTCTTTGTACTCACATCTTCCTCCACCGTCAGCTGCGGCGCTACTCCCCGGAAACTTCTCAATTT
CCCTGACATGTCTTGGGGTTCACCCAGTGGAGGAGGTGGTGGTGGGAATGGGAACCCCACTGGGGCCTATGGCTCCGGCCATGGTCCTAATTGGGACTACAATTGGGGTT
GGGGTTCAAGCCCTGGGAGCGGTTGGGGTTTCGGTTCCGGTTCGGGCCGCTCTCCAACCGGGTTTGGAAAAGGTTATGGATATGGATTTGGGTCGGGATCTGGGTCCGGG
TCGGGATATGGGTATGGAAGTGGGAGTGGTGGTGCTCATGGTGGTGGATATGGGTCTGGAAGTGGCTACGGTAACTCCGGCGGTGGCGGTAGTGGTGGCGGATACGGCGG
TCCGAGTGGTGATGAGTATCGATCGCCAATGACTACAAGGGACAAGAACAGGCAAGGGTAG
mRNA sequenceShow/hide mRNA sequence
CACTCCCCCCACTATAAAAGCCACTTTAATGATCACTACACAACACAACTTCTATCCTTCAACCAATTAATAATAATTTCAAATCTCTCTCTTTCTCTCTTAGAATAAAA
GAAAACTCACTAAAAATATGAAAGAACCATCTAAATTCCATCTCTCATCTCTCTTCTTTCTTCTCTTTGTACTCACATCTTCCTCCACCGTCAGCTGCGGCGCTACTCCC
CGGAAACTTCTCAATTTCCCTGACATGTCTTGGGGTTCACCCAGTGGAGGAGGTGGTGGTGGGAATGGGAACCCCACTGGGGCCTATGGCTCCGGCCATGGTCCTAATTG
GGACTACAATTGGGGTTGGGGTTCAAGCCCTGGGAGCGGTTGGGGTTTCGGTTCCGGTTCGGGCCGCTCTCCAACCGGGTTTGGAAAAGGTTATGGATATGGATTTGGGT
CGGGATCTGGGTCCGGGTCGGGATATGGGTATGGAAGTGGGAGTGGTGGTGCTCATGGTGGTGGATATGGGTCTGGAAGTGGCTACGGTAACTCCGGCGGTGGCGGTAGT
GGTGGCGGATACGGCGGTCCGAGTGGTGATGAGTATCGATCGCCAATGACTACAAGGGACAAGAACAGGCAAGGGTAGAAAAAATGTATGTGAATGAATATATGTTATAA
AGTGTAGTGATATATGGTGATAAAAAGGTGAGAATATATATGGTTAGCCCTAGCAAGCTAGCTCGCTTTTAATTATAATATATATGGTTTGTAAGCTTTGTTTAAAGTTT
TCCCATATATATGAGACTCAGCCTTATAATCATATATTATAGTGTGTAGTATTATATAACTTTATAATGAGACTAAAATATATTTTCCAATTTTCC
Protein sequenceShow/hide protein sequence
MKEPSKFHLSSLFFLLFVLTSSSTVSCGATPRKLLNFPDMSWGSPSGGGGGGNGNPTGAYGSGHGPNWDYNWGWGSSPGSGWGFGSGSGRSPTGFGKGYGYGFGSGSGSG
SGYGYGSGSGGAHGGGYGSGSGYGNSGGGGSGGGYGGPSGDEYRSPMTTRDKNRQG