; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI04G04320 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G04320
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionPolyadenylate-binding protein 1-like
Genome locationChr4:2813442..2818912
RNA-Seq ExpressionCSPI04G04320
SyntenyCSPI04G04320
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7014859.1 Polyadenylate-binding protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma]3.4e-12288.1Show/hide
Query:  MKRRVGDRIRNLIFIQLGTKYTTYPPSIEGPPESESETEMERNYSYDEHEHEVYGGDIPDDAELDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLK
        MK RV DRIRNLIF       + + P IEGPP  E+ETEM+RN++YDEH+HEVYGGDIPDDAE+DADLDMSSGRADEE YDAEPS+ANSKDLEDMKRRLK
Subjt:  MKRRVGDRIRNLIFIQLGTKYTTYPPSIEGPPESESETEMERNYSYDEHEHEVYGGDIPDDAELDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLK

Query:  EIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALL
        EIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEE DSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDA+QNALL
Subjt:  EIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALL

Query:  LNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRGRRPFIPTAPY-PSYGYGRVPRFRRPMRYRPY
        LNESELHGRQLKVSAKRTNVPGMKQ+RGRRPN FGFRGRRPF P+AP+ PSYGYGRVPRFRRPMRYRPY
Subjt:  LNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRGRRPFIPTAPY-PSYGYGRVPRFRRPMRYRPY

XP_004146890.2 polyadenylate-binding protein 1 isoform X2 [Cucumis sativus]1.5e-146100Show/hide
Query:  MKRRVGDRIRNLIFIQLGTKYTTYPPSIEGPPESESETEMERNYSYDEHEHEVYGGDIPDDAELDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLK
        MKRRVGDRIRNLIFIQLGTKYTTYPPSIEGPPESESETEMERNYSYDEHEHEVYGGDIPDDAELDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLK
Subjt:  MKRRVGDRIRNLIFIQLGTKYTTYPPSIEGPPESESETEMERNYSYDEHEHEVYGGDIPDDAELDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLK

Query:  EIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALL
        EIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALL
Subjt:  EIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALL

Query:  LNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRGRRPFIPTAPYPSYGYGRVPRFRRPMRYRPY
        LNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRGRRPFIPTAPYPSYGYGRVPRFRRPMRYRPY
Subjt:  LNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRGRRPFIPTAPYPSYGYGRVPRFRRPMRYRPY

XP_008453840.1 PREDICTED: polyadenylate-binding protein 2-like isoform X1 [Cucumis melo]4.5e-12298.69Show/hide
Query:  MERNYSYDEHEHEVYGGDIPDDAELDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEV
        MERNY+YDEHEHEVYGGDIPDDAE+DADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEV
Subjt:  MERNYSYDEHEHEVYGGDIPDDAELDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEV

Query:  DSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRGR
        DSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRGR
Subjt:  DSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRGR

Query:  RPFIPTAPYPSYGYGRVPRFRRPMRYRPY
        RPF PTAPYPSYGYGRVPRFRRPMRYRPY
Subjt:  RPFIPTAPYPSYGYGRVPRFRRPMRYRPY

XP_011653101.1 polyadenylate-binding protein 1 isoform X1 [Cucumis sativus]3.8e-14599.63Show/hide
Query:  MKRRVGDRIRNLIFIQLGTKYTTYPPSIEGPPESESETEMERNYSYDEHEHEVYGGDIPDDAELDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLK
        MKRRVGDRIRNLIFIQLGTKYTTYPPSIEGPPESESETEMERNYSYDEHEHEVYGGDIPDDAELDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLK
Subjt:  MKRRVGDRIRNLIFIQLGTKYTTYPPSIEGPPESESETEMERNYSYDEHEHEVYGGDIPDDAELDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLK

Query:  EIEEEAGALREMQAKVEKEMGAVQ-DSSSTSATQAEKEEVDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNAL
        EIEEEAGALREMQAKVEKEMGAVQ DSSSTSATQAEKEEVDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNAL
Subjt:  EIEEEAGALREMQAKVEKEMGAVQ-DSSSTSATQAEKEEVDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNAL

Query:  LLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRGRRPFIPTAPYPSYGYGRVPRFRRPMRYRPY
        LLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRGRRPFIPTAPYPSYGYGRVPRFRRPMRYRPY
Subjt:  LLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRGRRPFIPTAPYPSYGYGRVPRFRRPMRYRPY

XP_023551770.1 polyadenylate-binding protein 1-like isoform X2 [Cucurbita pepo subsp. pepo]2.0e-12287.36Show/hide
Query:  MKRRVGDRIRNLIFIQLGTKYTTYPPSIEGPPESESETEMERNYSYDEHEHEVYGGDIPDDAELDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLK
        MK RV DRIRNLI              IEGPP  E+ETEM+RN++YDEH+HEVYGGDIPDDAE+DADLDMSSGRADEE Y+AEPS+ANSKDLEDMKRRLK
Subjt:  MKRRVGDRIRNLIFIQLGTKYTTYPPSIEGPPESESETEMERNYSYDEHEHEVYGGDIPDDAELDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLK

Query:  EIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALL
        EIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEE DSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDA+QNALL
Subjt:  EIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALL

Query:  LNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRGRRPFIPTAPY-PSYGYGRVPRFRRPMRYRPY
        LNESELHGRQLKVSAKRTNVPGMKQ+RGRRPN FGFRGRRPFIP+AP+ PSYGYGRVPRFRRPMRYRPY
Subjt:  LNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRGRRPFIPTAPY-PSYGYGRVPRFRRPMRYRPY

TrEMBL top hitse value%identityAlignment
A0A0A0KXP6 RRM domain-containing protein1.5e-123100Show/hide
Query:  MERNYSYDEHEHEVYGGDIPDDAELDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEV
        MERNYSYDEHEHEVYGGDIPDDAELDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEV
Subjt:  MERNYSYDEHEHEVYGGDIPDDAELDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEV

Query:  DSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRGR
        DSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRGR
Subjt:  DSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRGR

Query:  RPFIPTAPYPSYGYGRVPRFRRPMRYRPY
        RPFIPTAPYPSYGYGRVPRFRRPMRYRPY
Subjt:  RPFIPTAPYPSYGYGRVPRFRRPMRYRPY

A0A1S3BWP8 polyadenylate-binding protein 2-like isoform X12.2e-12298.69Show/hide
Query:  MERNYSYDEHEHEVYGGDIPDDAELDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEV
        MERNY+YDEHEHEVYGGDIPDDAE+DADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEV
Subjt:  MERNYSYDEHEHEVYGGDIPDDAELDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEV

Query:  DSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRGR
        DSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRGR
Subjt:  DSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRGR

Query:  RPFIPTAPYPSYGYGRVPRFRRPMRYRPY
        RPF PTAPYPSYGYGRVPRFRRPMRYRPY
Subjt:  RPFIPTAPYPSYGYGRVPRFRRPMRYRPY

A0A1S3BYF0 polyadenylate-binding protein 1-like isoform X25.4e-12198.26Show/hide
Query:  MERNYSYDEHEHEVYGGDIPDDAELDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQ-DSSSTSATQAEKEE
        MERNY+YDEHEHEVYGGDIPDDAE+DADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQ DSSSTSATQAEKEE
Subjt:  MERNYSYDEHEHEVYGGDIPDDAELDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQ-DSSSTSATQAEKEE

Query:  VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRG
        VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRG
Subjt:  VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRG

Query:  RRPFIPTAPYPSYGYGRVPRFRRPMRYRPY
        RRPF PTAPYPSYGYGRVPRFRRPMRYRPY
Subjt:  RRPFIPTAPYPSYGYGRVPRFRRPMRYRPY

A0A6J1FPG9 polyadenylate-binding protein 1-like isoform X24.0e-11694.81Show/hide
Query:  MERNYSYDEHEHEVYGGDIPDDAELDADLDMSSGRADEEGY-DAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEE
        ME N++YDEHEHEVYGGDIPDDAE+DADLDMSSGRADEEGY DAEP+NANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEE
Subjt:  MERNYSYDEHEHEVYGGDIPDDAELDADLDMSSGRADEEGY-DAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEE

Query:  VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRG
        VD+RSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNP+GFRG
Subjt:  VDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRG

Query:  RRPFIPTAP-YPSYGYGRVPRFRRPMRYRPY
        RRPF+  AP YPSYGYGRVPRFRRPMRYRPY
Subjt:  RRPFIPTAP-YPSYGYGRVPRFRRPMRYRPY

A0A6J1JBY2 polyadenylate-binding protein 1-like isoform X24.0e-11693.91Show/hide
Query:  MERNYSYDEHEHEVYGGDIPDDAELDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEV
        M+RN++YDEH+HEVYGGDIPDDAE+DADLDMSSGRADEE YDAEPS+ANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEE 
Subjt:  MERNYSYDEHEHEVYGGDIPDDAELDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEV

Query:  DSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRGR
        DSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDA+QNALLLNESELHGRQLKVSAKRTNVPGMKQ+RGRRPN FGFRGR
Subjt:  DSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRGR

Query:  RPFIPTAPY-PSYGYGRVPRFRRPMRYRPY
        RPFIP+AP+ PSYGYGRVPRFRRPMRYRPY
Subjt:  RPFIPTAPY-PSYGYGRVPRFRRPMRYRPY

SwissProt top hitse value%identityAlignment
O14327 Polyadenylate-binding protein 23.9e-3655Show/hide
Query:  DAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-G
        D +  +   K+L +MK R+ E+E EA  LR MQ +++ E         T A + +KE +D++SVYVGNVDY+ TPEE+Q HF SCG+VNRVTIL DKF G
Subjt:  DAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-G

Query:  HPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRGR
        HPKGFAY+EF E   V NALLLN S LH R LKV+ KRTNVPGM + RGR       RGR
Subjt:  HPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRGR

Q28ZX3 Polyadenylate-binding protein 28.4e-3146.63Show/hide
Query:  DAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEM--GAVQDSSSTSATQAEKEEVDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF
        + E S     +LE +K R+KE+EEEA  +++MQ++V+K+M  G+    ++   +  EK+E+D+RSVYVGNVDY  + EE++ HF  CGT+NRVTIL +K 
Subjt:  DAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEM--GAVQDSSSTSATQAEKEEVDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF

Query:  -GHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRGRR
         GHPKGFAY+EF   + V+ AL +NE+   GRQ+KV +KRTN PG+          F  RG R
Subjt:  -GHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRGRR

Q93VI4 Polyadenylate-binding protein 12.6e-8072.17Show/hide
Query:  YDEHEHEVYGGDIPDDAELDADLDMSSGRADEEGYDA-----EPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVD
        +DE EHEVYGG+IP++ E + D +       EEG  A     EP  ++S+DLEDMK+R+KEIEEEAGALREMQAK EK+MGA QD S    + AEKEEVD
Subjt:  YDEHEHEVYGGDIPDDAELDADLDMSSGRADEEGYDA-----EPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVD

Query:  SRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGR-RPNPFGFRGR
        SRS+YVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG PKGFAYVEFVEV+AVQN+L+LNESELHGRQ+KVSAKRTNVPGM+Q+RGR RP    FR  
Subjt:  SRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGR-RPNPFGFRGR

Query:  RPFIPTAP-YPSYGYGRVPRFRRPMRYRPY
        R F+P  P YP Y YGRVPRFRRPMRYRPY
Subjt:  RPFIPTAP-YPSYGYGRVPRFRRPMRYRPY

Q9FJN9 Polyadenylate-binding protein 27.8e-7769.51Show/hide
Query:  DEHEHEVYGGDIPDDAELDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSVYV
        +E EHEVYGG+IPD  E+D D++  +   D    D +      K+L++MK+RLKE+E+EA ALREMQAKVEKEMGA QD +S +A QA KEEVD+RSV+V
Subjt:  DEHEHEVYGGDIPDDAELDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSVYV

Query:  GNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPF-GFRGRRPFIPT
        GNVDYACTPEEVQQHFQ+CGTV+RVTILTDKFG PKGFAYVEFVEV+AVQ AL LNESELHGRQLKV  KRTNVPG+KQ+RGRR NP+ G+R RRPF+  
Subjt:  GNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPF-GFRGRRPFIPT

Query:  APYPSYGYGRVPRFRRPMRYRPY
          Y  YGYG+ PRFRRPMRY PY
Subjt:  APYPSYGYGRVPRFRRPMRYRPY

Q9LX90 Polyadenylate-binding protein 35.1e-7669.91Show/hide
Query:  DEHEHEVYGGDIPDDAELDA---DLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRS
        +E EHEVYGG+IP+  + D    D+DMS+  ADE+            +L +MKRRLKE+EEEA ALREMQAKVEKEMGA QD +S +A Q  KEEVD+RS
Subjt:  DEHEHEVYGGDIPDDAELDA---DLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRS

Query:  VYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNP-FGFRGRRPF
        VYVGNVDYACTPEEVQ HFQ+CGTVNRVTIL DKFG PKGFAYVEFVEV+AVQ AL LNESELHGRQLKVS KRTNVPGMKQY   R NP  G+R RRPF
Subjt:  VYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNP-FGFRGRRPF

Query:  IPTAPYPSYGYGRVPRFRRPMRYRPY
        +P   Y  YGYG+ PRFRRPMRY PY
Subjt:  IPTAPYPSYGYGRVPRFRRPMRYRPY

Arabidopsis top hitse value%identityAlignment
AT5G10350.1 RNA-binding (RRM/RBD/RNP motifs) family protein3.6e-7769.91Show/hide
Query:  DEHEHEVYGGDIPDDAELDA---DLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRS
        +E EHEVYGG+IP+  + D    D+DMS+  ADE+            +L +MKRRLKE+EEEA ALREMQAKVEKEMGA QD +S +A Q  KEEVD+RS
Subjt:  DEHEHEVYGGDIPDDAELDA---DLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRS

Query:  VYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNP-FGFRGRRPF
        VYVGNVDYACTPEEVQ HFQ+CGTVNRVTIL DKFG PKGFAYVEFVEV+AVQ AL LNESELHGRQLKVS KRTNVPGMKQY   R NP  G+R RRPF
Subjt:  VYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNP-FGFRGRRPF

Query:  IPTAPYPSYGYGRVPRFRRPMRYRPY
        +P   Y  YGYG+ PRFRRPMRY PY
Subjt:  IPTAPYPSYGYGRVPRFRRPMRYRPY

AT5G10350.2 RNA-binding (RRM/RBD/RNP motifs) family protein7.2e-7069.34Show/hide
Query:  DEHEHEVYGGDIPDDAELDA---DLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRS
        +E EHEVYGG+IP+  + D    D+DMS+  ADE+            +L +MKRRLKE+EEEA ALREMQAKVEKEMGA QD +S +A Q  KEEVD+RS
Subjt:  DEHEHEVYGGDIPDDAELDA---DLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRS

Query:  VYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNP-FGFRGRRPF
        VYVGNVDYACTPEEVQ HFQ+CGTVNRVTIL DKFG PKGFAYVEFVEV+AVQ AL LNESELHGRQLKVS KRTNVPGMKQY   R NP  G+R RRPF
Subjt:  VYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNP-FGFRGRRPF

Query:  IPTAPYPSYGYG
        +P   Y  YGYG
Subjt:  IPTAPYPSYGYG

AT5G51120.1 polyadenylate-binding protein 11.8e-8172.17Show/hide
Query:  YDEHEHEVYGGDIPDDAELDADLDMSSGRADEEGYDA-----EPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVD
        +DE EHEVYGG+IP++ E + D +       EEG  A     EP  ++S+DLEDMK+R+KEIEEEAGALREMQAK EK+MGA QD S    + AEKEEVD
Subjt:  YDEHEHEVYGGDIPDDAELDADLDMSSGRADEEGYDA-----EPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVD

Query:  SRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGR-RPNPFGFRGR
        SRS+YVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG PKGFAYVEFVEV+AVQN+L+LNESELHGRQ+KVSAKRTNVPGM+Q+RGR RP    FR  
Subjt:  SRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGR-RPNPFGFRGR

Query:  RPFIPTAP-YPSYGYGRVPRFRRPMRYRPY
        R F+P  P YP Y YGRVPRFRRPMRYRPY
Subjt:  RPFIPTAP-YPSYGYGRVPRFRRPMRYRPY

AT5G51120.2 polyadenylate-binding protein 13.0e-7661.42Show/hide
Query:  YDEHEHEVYGGDIPDDAELDADLDMSSGRADEEGYDA-----EPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQ----------------
        +DE EHEVYGG+IP++ E + D +       EEG  A     EP  ++S+DLEDMK+R+KEIEEEAGALREMQAK EK+MGA Q                
Subjt:  YDEHEHEVYGGDIPDDAELDADLDMSSGRADEEGYDA-----EPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQ----------------

Query:  ---------------------DSSSTSATQAEKEEVDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNE
                             +  ++  + AEKEEVDSRS+YVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG PKGFAYVEFVEV+AVQN+L+LNE
Subjt:  ---------------------DSSSTSATQAEKEEVDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNE

Query:  SELHGRQLKVSAKRTNVPGMKQYRGR-RPNPFGFRGRRPFIPTAP-YPSYGYGRVPRFRRPMRYRPY
        SELHGRQ+KVSAKRTNVPGM+Q+RGR RP    FR  R F+P  P YP Y YGRVPRFRRPMRYRPY
Subjt:  SELHGRQLKVSAKRTNVPGMKQYRGR-RPNPFGFRGRRPFIPTAP-YPSYGYGRVPRFRRPMRYRPY

AT5G65260.1 RNA-binding (RRM/RBD/RNP motifs) family protein5.5e-7869.51Show/hide
Query:  DEHEHEVYGGDIPDDAELDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSVYV
        +E EHEVYGG+IPD  E+D D++  +   D    D +      K+L++MK+RLKE+E+EA ALREMQAKVEKEMGA QD +S +A QA KEEVD+RSV+V
Subjt:  DEHEHEVYGGDIPDDAELDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSVYV

Query:  GNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPF-GFRGRRPFIPT
        GNVDYACTPEEVQQHFQ+CGTV+RVTILTDKFG PKGFAYVEFVEV+AVQ AL LNESELHGRQLKV  KRTNVPG+KQ+RGRR NP+ G+R RRPF+  
Subjt:  GNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPF-GFRGRRPFIPT

Query:  APYPSYGYGRVPRFRRPMRYRPY
          Y  YGYG+ PRFRRPMRY PY
Subjt:  APYPSYGYGRVPRFRRPMRYRPY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAGAAGAGTCGGAGACAGGATCCGAAACCTAATCTTCATTCAATTGGGAACCAAATACACAACTTACCCACCATCGATCGAGGGGCCACCGGAGTCGGAATCGGA
GACGGAGATGGAGCGCAATTATTCCTACGACGAGCACGAGCACGAAGTTTACGGTGGGGATATTCCCGACGACGCCGAGTTGGATGCCGACCTCGACATGTCTTCTGGTA
GGGCCGACGAAGAAGGCTACGACGCTGAGCCTAGTAACGCTAACTCCAAGGACTTGGAGGACATGAAGAGGAGGCTTAAGGAGATCGAAGAGGAGGCTGGTGCCCTTCGG
GAAATGCAGGCTAAAGTTGAGAAGGAGATGGGTGCTGTTCAAGATTCATCCAGTACCTCTGCAACACAGGCTGAAAAGGAGGAAGTAGATTCTCGATCTGTATATGTTGG
TAATGTCGACTATGCATGCACTCCTGAAGAGGTCCAACAGCATTTTCAATCTTGTGGGACAGTGAATAGAGTGACAATTTTGACGGACAAATTTGGTCACCCGAAGGGAT
TTGCTTATGTTGAGTTCGTGGAGGTTGATGCTGTCCAGAATGCCTTGCTGTTAAATGAGTCAGAGTTGCATGGTCGTCAACTTAAGGTCTCTGCTAAAAGGACAAATGTG
CCGGGTATGAAGCAATACCGTGGAAGGAGGCCAAACCCTTTTGGCTTTCGAGGTCGCCGGCCTTTCATTCCCACCGCACCTTATCCTTCATATGGTTATGGAAGGGTCCC
AAGGTTCAGGCGACCGATGCGGTACAGACCCTACTAG
mRNA sequenceShow/hide mRNA sequence
AGAAAAAAAAAAGAAAAAAAAAAAGAAAAGGAAAAAAAGATAATATGAAAAGAAGAGTCGGAGACAGGATCCGAAACCTAATCTTCATTCAATTGGGAACCAAATACACA
ACTTACCCACCATCGATCGAGGGGCCACCGGAGTCGGAATCGGAGACGGAGATGGAGCGCAATTATTCCTACGACGAGCACGAGCACGAAGTTTACGGTGGGGATATTCC
CGACGACGCCGAGTTGGATGCCGACCTCGACATGTCTTCTGGTAGGGCCGACGAAGAAGGCTACGACGCTGAGCCTAGTAACGCTAACTCCAAGGACTTGGAGGACATGA
AGAGGAGGCTTAAGGAGATCGAAGAGGAGGCTGGTGCCCTTCGGGAAATGCAGGCTAAAGTTGAGAAGGAGATGGGTGCTGTTCAAGATTCATCCAGTACCTCTGCAACA
CAGGCTGAAAAGGAGGAAGTAGATTCTCGATCTGTATATGTTGGTAATGTCGACTATGCATGCACTCCTGAAGAGGTCCAACAGCATTTTCAATCTTGTGGGACAGTGAA
TAGAGTGACAATTTTGACGGACAAATTTGGTCACCCGAAGGGATTTGCTTATGTTGAGTTCGTGGAGGTTGATGCTGTCCAGAATGCCTTGCTGTTAAATGAGTCAGAGT
TGCATGGTCGTCAACTTAAGGTCTCTGCTAAAAGGACAAATGTGCCGGGTATGAAGCAATACCGTGGAAGGAGGCCAAACCCTTTTGGCTTTCGAGGTCGCCGGCCTTTC
ATTCCCACCGCACCTTATCCTTCATATGGTTATGGAAGGGTCCCAAGGTTCAGGCGACCGATGCGGTACAGACCCTACTAGGAGATACAATGCTCGTACTACTGCAAAGT
TATTGTTCGGGATCTAGGTTCCTTCAACTCAATGGTGTTTTTACCATCTCTATAACTTGGAGGGTGTGGAAAACATTGTACTTTATTGACGTTTCAACAGTCCCACTTGA
GTTTCTTATGAACTTGGTAGCAGTTTGTAGCTTTGAGGAGGTAAAGATTTGTGGACTGGTTAACAATTTGTTGGCTCTGGAAGGGCTGAAAAAACCATGTTATCAACCAT
AAGAGAATTTGGAAGAAAGAAAATTAAGGAAATTAAAGGACATGTTCTTGTGTATGGATGAATTGGAACTGATCAGGATGTAGAATTCTTTGTTATTTGAGGAGTAATTA
TAAGTTGATATGATGATATGTAGAACTATCCTACCTTTTGTCTTCTCTCCAGTTTGATGGGTTTAGCAATGAAATTTCTTGTTTGGTTT
Protein sequenceShow/hide protein sequence
MKRRVGDRIRNLIFIQLGTKYTTYPPSIEGPPESESETEMERNYSYDEHEHEVYGGDIPDDAELDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALR
EMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNV
PGMKQYRGRRPNPFGFRGRRPFIPTAPYPSYGYGRVPRFRRPMRYRPY