CuGenDBv2

Gene ID	CSPI04G04370
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	late embryogenesis abundant protein At5g17165-like
Genome location	Chr4:2842734..2843200
RNA-Seq Expression	CSPI04G04370
Synteny	CSPI04G04370
Gene Ontology terms	NA
InterPro domains	IPR039291 - Late embryogenesis abundant protein At5g17165-like

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0044696.1 uncharacterized protein E6C27_scaffold46G004520 [Cucumis melo var. makuwa]

9.2e-38

92.39

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Query:  RAAHTSVYDKNPEEQVRPSIVPDDVIQPQAAADNYWAPHPQTGVFGPASDNPAAVAAAANRAADGGNYSAVEEEKAWFRPTSLEDSEKPHGL
        RAAHTSVYDKNPEEQVRPSIVPDDVIQP  AAD YWAPHPQTGVFGP SDNPAAV AAANRAAD GNYSA EEEKAWFRPTSLEDSEKPHGL
Subjt:  RAAHTSVYDKNPEEQVRPSIVPDDVIQPQAAADNYWAPHPQTGVFGPASDNPAAVAAAANRAADGGNYSAVEEEKAWFRPTSLEDSEKPHGL

TYK16890.1 uncharacterized protein E5676_scaffold130G00220 [Cucumis melo var. makuwa]

1.9e-38

93.48

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Query:  RAAHTSVYDKNPEEQVRPSIVPDDVIQPQAAADNYWAPHPQTGVFGPASDNPAAVAAAANRAADGGNYSAVEEEKAWFRPTSLEDSEKPHGL
        RAAHTSVYDKNPEEQVRPSIVPDDVIQPQ AAD YWAPHPQTGVFGP SDNPAAV AAANRAAD GNYSA EEEKAWFRPTSLEDSEKPHGL
Subjt:  RAAHTSVYDKNPEEQVRPSIVPDDVIQPQAAADNYWAPHPQTGVFGPASDNPAAVAAAANRAADGGNYSAVEEEKAWFRPTSLEDSEKPHGL

XP_004146886.1 late embryogenesis abundant protein At5g17165 [Cucumis sativus]

1.0e-44

100

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Query:  RAAHTSVYDKNPEEQVRPSIVPDDVIQPQAAADNYWAPHPQTGVFGPASDNPAAVAAAANRAADGGNYSAVEEEKAWFRPTSLEDSEKPHGL
        RAAHTSVYDKNPEEQVRPSIVPDDVIQPQAAADNYWAPHPQTGVFGPASDNPAAVAAAANRAADGGNYSAVEEEKAWFRPTSLEDSEKPHGL
Subjt:  RAAHTSVYDKNPEEQVRPSIVPDDVIQPQAAADNYWAPHPQTGVFGPASDNPAAVAAAANRAADGGNYSAVEEEKAWFRPTSLEDSEKPHGL

XP_008453829.1 PREDICTED: uncharacterized protein LOC103494437 [Cucumis melo]

1.9e-38

93.48

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Query:  RAAHTSVYDKNPEEQVRPSIVPDDVIQPQAAADNYWAPHPQTGVFGPASDNPAAVAAAANRAADGGNYSAVEEEKAWFRPTSLEDSEKPHGL
        RAAHTSVYDKNPEEQVRPSIVPDDVIQPQ AAD YWAPHPQTGVFGP SDNPAAV AAANRAAD GNYSA EEEKAWFRPTSLEDSEKPHGL
Subjt:  RAAHTSVYDKNPEEQVRPSIVPDDVIQPQAAADNYWAPHPQTGVFGPASDNPAAVAAAANRAADGGNYSAVEEEKAWFRPTSLEDSEKPHGL

XP_038901450.1 late embryogenesis abundant protein At5g17165-like [Benincasa hispida]

5.4e-38

91.3

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Query:  RAAHTSVYDKNPEEQVRPSIVPDDVIQPQAAADNYWAPHPQTGVFGPASDNPAAVAAAANRAADGGNYSAVEEEKAWFRPTSLEDSEKPHGL
        RAAHTS YDKNP+EQVRPS+VPDDVIQ Q AAD YWAPHPQTGVFGPASDNPA  AAAANRAADGGNYSAVEEEKAWFRPTSLEDSEKPHGL
Subjt:  RAAHTSVYDKNPEEQVRPSIVPDDVIQPQAAADNYWAPHPQTGVFGPASDNPAAVAAAANRAADGGNYSAVEEEKAWFRPTSLEDSEKPHGL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KUG6 Uncharacterized protein

2.6e-46

100

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Query:  MMRAAHTSVYDKNPEEQVRPSIVPDDVIQPQAAADNYWAPHPQTGVFGPASDNPAAVAAAANRAADGGNYSAVEEEKAWFRPTSLEDSEKPHGL
        MMRAAHTSVYDKNPEEQVRPSIVPDDVIQPQAAADNYWAPHPQTGVFGPASDNPAAVAAAANRAADGGNYSAVEEEKAWFRPTSLEDSEKPHGL
Subjt:  MMRAAHTSVYDKNPEEQVRPSIVPDDVIQPQAAADNYWAPHPQTGVFGPASDNPAAVAAAANRAADGGNYSAVEEEKAWFRPTSLEDSEKPHGL

A0A1S3BYE5 uncharacterized protein LOC103494437

9.0e-39

93.48

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Query:  RAAHTSVYDKNPEEQVRPSIVPDDVIQPQAAADNYWAPHPQTGVFGPASDNPAAVAAAANRAADGGNYSAVEEEKAWFRPTSLEDSEKPHGL
        RAAHTSVYDKNPEEQVRPSIVPDDVIQPQ AAD YWAPHPQTGVFGP SDNPAAV AAANRAAD GNYSA EEEKAWFRPTSLEDSEKPHGL
Subjt:  RAAHTSVYDKNPEEQVRPSIVPDDVIQPQAAADNYWAPHPQTGVFGPASDNPAAVAAAANRAADGGNYSAVEEEKAWFRPTSLEDSEKPHGL

A0A5A7TRD4 Uncharacterized protein

4.5e-38

92.39

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Query:  RAAHTSVYDKNPEEQVRPSIVPDDVIQPQAAADNYWAPHPQTGVFGPASDNPAAVAAAANRAADGGNYSAVEEEKAWFRPTSLEDSEKPHGL
        RAAHTSVYDKNPEEQVRPSIVPDDVIQP  AAD YWAPHPQTGVFGP SDNPAAV AAANRAAD GNYSA EEEKAWFRPTSLEDSEKPHGL
Subjt:  RAAHTSVYDKNPEEQVRPSIVPDDVIQPQAAADNYWAPHPQTGVFGPASDNPAAVAAAANRAADGGNYSAVEEEKAWFRPTSLEDSEKPHGL

A0A5D3CZU9 Uncharacterized protein

9.0e-39

93.48

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Query:  RAAHTSVYDKNPEEQVRPSIVPDDVIQPQAAADNYWAPHPQTGVFGPASDNPAAVAAAANRAADGGNYSAVEEEKAWFRPTSLEDSEKPHGL
        RAAHTSVYDKNPEEQVRPSIVPDDVIQPQ AAD YWAPHPQTGVFGP SDNPAAV AAANRAAD GNYSA EEEKAWFRPTSLEDSEKPHGL
Subjt:  RAAHTSVYDKNPEEQVRPSIVPDDVIQPQAAADNYWAPHPQTGVFGPASDNPAAVAAAANRAADGGNYSAVEEEKAWFRPTSLEDSEKPHGL

A0A6J1JAZ8 late embryogenesis abundant protein At5g17165-like

1.1e-33

83.52

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Query:  RAAHTSVYDKNPEEQVRPSIVPDDVIQPQAAADNYWAPHPQTGVFGPASDNPAAVAAAANRAADGGNYSAVEEEKAWFRPTSLEDSEKPHG
        RAAHTS YDKN +EQVRPSIVPDDVIQPQ +AD YWAPHPQTGVFGPA+ NP  +AA AN  ADGGNYS VEEEKAWFRPTSLEDSEKPHG
Subjt:  RAAHTSVYDKNPEEQVRPSIVPDDVIQPQAAADNYWAPHPQTGVFGPASDNPAAVAAAANRAADGGNYSAVEEEKAWFRPTSLEDSEKPHG

SwissProt top hits

e value

%identity

Alignment

F4KFM8 Late embryogenesis abundant protein At5g17165

1.5e-19

55.56

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Query:  RAAHTSVYDKNPEEQVRPSIVPDDVIQPQAAADNYWAPHPQTGVFGPASDNPAAVAAAANRAADGGNYSAVEEEKAWFRPTSLEDSEKPH
        R  HTS YDKN EE+++PS VPD++I+P   +D YW+PHPQTGVFGP+S      +  A     GG   +V EEKAWFRPTSLED +K H
Subjt:  RAAHTSVYDKNPEEQVRPSIVPDDVIQPQAAADNYWAPHPQTGVFGPASDNPAAVAAAANRAADGGNYSAVEEEKAWFRPTSLEDSEKPH

Arabidopsis top hits

e value

%identity

Alignment

AT3G03150.1 unknown protein

9.2e-20

52.22

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Query:  RAAHTSVYDKNPEEQVRPSIVPDDVIQPQAAADNYWAPHPQTGVFGPASDNPAAVAAAANRAADGGNYSAVEEEKAWFRPTSLEDSEKPH
        R+ H+S YDKN E+++  S VPD+VI+P   +D YW+PHP+TGVFGP++   +A A  A++       +AV EE AWFRPTSLEDS+K H
Subjt:  RAAHTSVYDKNPEEQVRPSIVPDDVIQPQAAADNYWAPHPQTGVFGPASDNPAAVAAAANRAADGGNYSAVEEEKAWFRPTSLEDSEKPH

AT5G17165.1 unknown protein

1.1e-20

55.56

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Query:  RAAHTSVYDKNPEEQVRPSIVPDDVIQPQAAADNYWAPHPQTGVFGPASDNPAAVAAAANRAADGGNYSAVEEEKAWFRPTSLEDSEKPH
        R  HTS YDKN EE+++PS VPD++I+P   +D YW+PHPQTGVFGP+S      +  A     GG   +V EEKAWFRPTSLED +K H
Subjt:  RAAHTSVYDKNPEEQVRPSIVPDDVIQPQAAADNYWAPHPQTGVFGPASDNPAAVAAAANRAADGGNYSAVEEEKAWFRPTSLEDSEKPH

Sequences

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CDS sequence

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ATGATGAGAGCAGCTCACACCTCAGTGTATGACAAGAACCCAGAGGAGCAAGTTCGACCATCCATAGTCCCAGATGATGTGATTCAACCTCAAGCAGCAGCTGACAACTA
CTGGGCTCCTCATCCACAAACCGGAGTTTTTGGACCGGCCTCAGACAATCCTGCTGCAGTGGCGGCGGCAGCCAACCGTGCAGCCGATGGTGGCAACTACTCCGCTGTGG
AGGAGGAAAAAGCTTGGTTCCGACCAACAAGTCTGGAGGATTCGGAGAAGCCCCACGGGTTATAG

mRNA sequence

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Protein sequence

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MMRAAHTSVYDKNPEEQVRPSIVPDDVIQPQAAADNYWAPHPQTGVFGPASDNPAAVAAAANRAADGGNYSAVEEEKAWFRPTSLEDSEKPHGL

CSPI04G04370 (gene) of Cucumber (PI 183967) v1 genome