; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI04G04520 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G04520
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionpolyadenylate-binding protein 2-like
Genome locationChr4:2936189..2939599
RNA-Seq ExpressionCSPI04G04520
SyntenyCSPI04G04520
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8637153.1 hypothetical protein CSA_004635 [Cucumis sativus]3.8e-11785.66Show/hide
Query:  MQFYASNEEISRNQSEIVSERDMEEEEHEVYGGEIPVEGEMEGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQA
        MQFYASNEEISRNQS IVSERDMEEEEHEVYGGEIPVEGEMEGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQA
Subjt:  MQFYASNEEISRNQSEIVSERDMEEEEHEVYGGEIPVEGEMEGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQA

Query:  GKEETDSRSVFVGN--------------------------------------VDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQ
        GKEETDSRSVFVGN                                      VDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQ
Subjt:  GKEETDSRSVFVGN--------------------------------------VDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQ

Query:  EALVLNESELHGRQLKVLPKRTNVPGMKQYRARRYNPYVGFRRPYAPPYFYSPYGYGKMPRFRRSMRYMPYY
        EALVLNESELHGRQLKVLPKRTNVPGMKQYRARRYNPYVGFRRPYAPPYFYSPYGYGKMPRFRRSMRYMPYY
Subjt:  EALVLNESELHGRQLKVLPKRTNVPGMKQYRARRYNPYVGFRRPYAPPYFYSPYGYGKMPRFRRSMRYMPYY

KAE8637180.1 hypothetical protein CSA_018811 [Cucumis sativus]8.8e-11485.39Show/hide
Query:  MQFYASNEEISRNQSEIVSERDMEEEEHEVYGGEIPVEGEMEGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQA
        MQFYASNEEISRNQS IVSERDMEEEEHEVYGGEIPVEGEMEGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQA
Subjt:  MQFYASNEEISRNQSEIVSERDMEEEEHEVYGGEIPVEGEMEGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQA

Query:  GKEETDSRSVFVGN--------------------------------------VDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQ
        GKEETDSRSVFVGN                                      VDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQ
Subjt:  GKEETDSRSVFVGN--------------------------------------VDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQ

Query:  EALVLNESELHGRQLKVLPKRTNVPGMKQYRARRYNPYVGFRRPYAPPYFYSPYGYGKMPRFRRSMR
        EALVLNESELHGRQLKVLPKRTNVPGMKQYRARRYNPYVGFRRPYAPPYFYSPYGYGKMPRFRRSMR
Subjt:  EALVLNESELHGRQLKVLPKRTNVPGMKQYRARRYNPYVGFRRPYAPPYFYSPYGYGKMPRFRRSMR

KGN53209.1 hypothetical protein Csa_014786 [Cucumis sativus]7.9e-12399.57Show/hide
Query:  MQFYASNEEISRNQSEIVSERDMEEEEHEVYGGEIPVEGEMEGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQA
        MQFYASNEEISRNQS IVSERDMEEEEHEVYGGEIPVEGEMEGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQA
Subjt:  MQFYASNEEISRNQSEIVSERDMEEEEHEVYGGEIPVEGEMEGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQA

Query:  GKEETDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVLPKRTNVPGMKQYRARRYNPY
        GKEETDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVLPKRTNVPGMKQYRARRYNPY
Subjt:  GKEETDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVLPKRTNVPGMKQYRARRYNPY

Query:  VGFRRPYAPPYFYSPYGYGKMPRFRRSMRYMPYY
        VGFRRPYAPPYFYSPYGYGKMPRFRRSMRYMPYY
Subjt:  VGFRRPYAPPYFYSPYGYGKMPRFRRSMRYMPYY

XP_004146877.1 polyadenylate-binding protein 2 [Cucumis sativus]6.3e-112100Show/hide
Query:  MEEEEHEVYGGEIPVEGEMEGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQAGKEETDSRSVFVGNVDYACTPE
        MEEEEHEVYGGEIPVEGEMEGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQAGKEETDSRSVFVGNVDYACTPE
Subjt:  MEEEEHEVYGGEIPVEGEMEGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQAGKEETDSRSVFVGNVDYACTPE

Query:  EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVLPKRTNVPGMKQYRARRYNPYVGFRRPYAPPYFYSPYGYGKMP
        EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVLPKRTNVPGMKQYRARRYNPYVGFRRPYAPPYFYSPYGYGKMP
Subjt:  EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVLPKRTNVPGMKQYRARRYNPYVGFRRPYAPPYFYSPYGYGKMP

Query:  RFRRSMRYMPYY
        RFRRSMRYMPYY
Subjt:  RFRRSMRYMPYY

XP_008453809.2 PREDICTED: polyadenylate-binding protein 2 isoform X1 [Cucumis melo]3.0e-12298.72Show/hide
Query:  MQFYASNEEISRNQSEIVSERDMEEEEHEVYGGEIPVEGEMEGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQA
        MQFYASNEEISRN+SEI SERDMEEEEHEVYGGEIPVEGEMEGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSA QA
Subjt:  MQFYASNEEISRNQSEIVSERDMEEEEHEVYGGEIPVEGEMEGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQA

Query:  GKEETDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVLPKRTNVPGMKQYRARRYNPY
        GKEETDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVLPKRTNVPGMKQYRARRYNPY
Subjt:  GKEETDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVLPKRTNVPGMKQYRARRYNPY

Query:  VGFRRPYAPPYFYSPYGYGKMPRFRRSMRYMPYY
        VGFRRPYAPPYFYSPYGYGKMPRFRRSMRYMPYY
Subjt:  VGFRRPYAPPYFYSPYGYGKMPRFRRSMRYMPYY

TrEMBL top hitse value%identityAlignment
A0A0A0KWF2 RRM domain-containing protein3.8e-12399.57Show/hide
Query:  MQFYASNEEISRNQSEIVSERDMEEEEHEVYGGEIPVEGEMEGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQA
        MQFYASNEEISRNQS IVSERDMEEEEHEVYGGEIPVEGEMEGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQA
Subjt:  MQFYASNEEISRNQSEIVSERDMEEEEHEVYGGEIPVEGEMEGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQA

Query:  GKEETDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVLPKRTNVPGMKQYRARRYNPY
        GKEETDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVLPKRTNVPGMKQYRARRYNPY
Subjt:  GKEETDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVLPKRTNVPGMKQYRARRYNPY

Query:  VGFRRPYAPPYFYSPYGYGKMPRFRRSMRYMPYY
        VGFRRPYAPPYFYSPYGYGKMPRFRRSMRYMPYY
Subjt:  VGFRRPYAPPYFYSPYGYGKMPRFRRSMRYMPYY

A0A1S3BX92 polyadenylate-binding protein 2 isoform X11.5e-12298.72Show/hide
Query:  MQFYASNEEISRNQSEIVSERDMEEEEHEVYGGEIPVEGEMEGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQA
        MQFYASNEEISRN+SEI SERDMEEEEHEVYGGEIPVEGEMEGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSA QA
Subjt:  MQFYASNEEISRNQSEIVSERDMEEEEHEVYGGEIPVEGEMEGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQA

Query:  GKEETDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVLPKRTNVPGMKQYRARRYNPY
        GKEETDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVLPKRTNVPGMKQYRARRYNPY
Subjt:  GKEETDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVLPKRTNVPGMKQYRARRYNPY

Query:  VGFRRPYAPPYFYSPYGYGKMPRFRRSMRYMPYY
        VGFRRPYAPPYFYSPYGYGKMPRFRRSMRYMPYY
Subjt:  VGFRRPYAPPYFYSPYGYGKMPRFRRSMRYMPYY

A0A5D3D298 Polyadenylate-binding protein 2 isoform X11.5e-12298.72Show/hide
Query:  MQFYASNEEISRNQSEIVSERDMEEEEHEVYGGEIPVEGEMEGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQA
        MQFYASNEEISRN+SEI SERDMEEEEHEVYGGEIPVEGEMEGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSA QA
Subjt:  MQFYASNEEISRNQSEIVSERDMEEEEHEVYGGEIPVEGEMEGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQA

Query:  GKEETDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVLPKRTNVPGMKQYRARRYNPY
        GKEETDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVLPKRTNVPGMKQYRARRYNPY
Subjt:  GKEETDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVLPKRTNVPGMKQYRARRYNPY

Query:  VGFRRPYAPPYFYSPYGYGKMPRFRRSMRYMPYY
        VGFRRPYAPPYFYSPYGYGKMPRFRRSMRYMPYY
Subjt:  VGFRRPYAPPYFYSPYGYGKMPRFRRSMRYMPYY

A0A6J1C6V0 polyadenylate-binding protein 2-like isoform X11.4e-10997.17Show/hide
Query:  MEEEEHEVYGGEIPVEGEMEGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQAGKEETDSRSVFVGNVDYACTPE
        MEEEEHEVYGGEIPVEGEM+GDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQAGKEETDSRSVFVGNVDYACTPE
Subjt:  MEEEEHEVYGGEIPVEGEMEGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQAGKEETDSRSVFVGNVDYACTPE

Query:  EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVLPKRTNVPGMKQYRARRYNPYVGFRRPYAPPYFYSPYGYGKMP
        EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEAL+LNESELHGRQLKVLPKRTNVPGMKQYR RRYNPY+GFRRPY PPYFYSPYGYGKMP
Subjt:  EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVLPKRTNVPGMKQYRARRYNPYVGFRRPYAPPYFYSPYGYGKMP

Query:  RFRRSMRYMPYY
        RFRR MRYMPYY
Subjt:  RFRRSMRYMPYY

A0A6J1EN98 polyadenylate-binding protein 2-like5.4e-10996.7Show/hide
Query:  MEEEEHEVYGGEIPVEGEMEGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQAGKEETDSRSVFVGNVDYACTPE
        MEEEEHEVYGGEIPVEGEM+GDVDMS  DDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTS SQAGKEETDSRSVFVGNVDYACTPE
Subjt:  MEEEEHEVYGGEIPVEGEMEGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQAGKEETDSRSVFVGNVDYACTPE

Query:  EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVLPKRTNVPGMKQYRARRYNPYVGFRRPYAPPYFYSPYGYGKMP
        EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEA+AVQEAL+LNESELHGRQLKVLPKRTNVPGMKQYR RRYNPYVGFRRPYAPPYFYSPYGYGKMP
Subjt:  EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVLPKRTNVPGMKQYRARRYNPYVGFRRPYAPPYFYSPYGYGKMP

Query:  RFRRSMRYMPYY
        RFRRSMRYMPYY
Subjt:  RFRRSMRYMPYY

SwissProt top hitse value%identityAlignment
O14327 Polyadenylate-binding protein 24.2e-3458.62Show/hide
Query:  DDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQAGKEETDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGF
        D   KEL EMK+R+ EME EAA LR MQ +++ E         T A +  KE  D++SV+VGNVDY+ TPEE+Q HF SCG+VNRVTIL DKF G PKGF
Subjt:  DDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQAGKEETDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGF

Query:  AYVEFLEAEAVQEALVLNESELHGRQLKVLPKRTNVPGMKQYRAR
        AY+EF E   V  AL+LN S LH R LKV PKRTNVPGM + R R
Subjt:  AYVEFLEAEAVQEALVLNESELHGRQLKVLPKRTNVPGMKQYRAR

Q8CCS6 Polyadenylate-binding protein 28.7e-3245.02Show/hide
Query:  EGEMEGDVDMSAGDDDAVK--ELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTS---ASQAGKEETDSRSVFVGNVDYACTPEEVQQHFQSCG
        E E  G V+   G D A++  EL+ +K R++EMEEEA  L+E+Q +VEK+M     P        S   K E D+RS++VGNVDY  T EE++ HF  CG
Subjt:  EGEMEGDVDMSAGDDDAVK--ELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTS---ASQAGKEETDSRSVFVGNVDYACTPEEVQQHFQSCG

Query:  TVNRVTILTDKF-GQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVLPKRTNVPGM---------KQYRARRYNPYVGFRRPYAPPYFYSPYGYGKMP
        +VNRVTIL DKF G PKGFAY+EF + E+V+ +L L+ES   GRQ+KV+PKRTN PG+          +YRAR  N Y   R  +   +   P G     
Subjt:  TVNRVTILTDKF-GQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVLPKRTNVPGM---------KQYRARRYNPYVGFRRPYAPPYFYSPYGYGKMP

Query:  RFRRSMRYMPY
        R R +  Y PY
Subjt:  RFRRSMRYMPY

Q93VI4 Polyadenylate-binding protein 12.1e-7066.08Show/hide
Query:  EEEEHEVYGGEIP--VEGEME--------GDVDMSAGDDD-----AVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQAGKEETDSR
        +E+EHEVYGGEIP   EGEM+        G+   +AGD++     + ++L++MKKR+KE+EEEA ALREMQAK EK+MGA QDP+G   S A KEE DSR
Subjt:  EEEEHEVYGGEIP--VEGEME--------GDVDMSAGDDD-----AVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQAGKEETDSR

Query:  SVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVLPKRTNVPGMKQY--RARRYNPYVGFRRP
        S++VGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEF+E EAVQ +L+LNESELHGRQ+KV  KRTNVPGM+Q+  R R + P  GF  P
Subjt:  SVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVLPKRTNVPGMKQY--RARRYNPYVGFRRP

Query:  YAPPYFYSPYGYGKMPRFRRSMRYMPY
          P  FY PY YG++PRFRR MRY PY
Subjt:  YAPPYFYSPYGYGKMPRFRRSMRYMPY

Q9FJN9 Polyadenylate-binding protein 21.5e-9281.82Show/hide
Query:  MEEEEHEVYGGEIPVEGEMEG-------DVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQAGKEETDSRSVFVGNV
        MEEEEHEVYGGEIP  GEM+G       D+DM+A DDDAVKELDEMKKRLKEME+EAAALREMQAKVEKEMGA QDPA  +A+QAGKEE D+RSVFVGNV
Subjt:  MEEEEHEVYGGEIPVEGEMEG-------DVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQAGKEETDSRSVFVGNV

Query:  DYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVLPKRTNVPGMKQYRARRYNPYVG--FRRPYAPPYFY
        DYACTPEEVQQHFQ+CGTV+RVTILTDKFGQPKGFAYVEF+E EAVQEAL LNESELHGRQLKVL KRTNVPG+KQ+R RR+NPY+G  FRRP+  PY Y
Subjt:  DYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVLPKRTNVPGMKQYRARRYNPYVG--FRRPYAPPYFY

Query:  SPYGYGKMPRFRRSMRYMPY
        SPYGYGK PRFRR MRYMPY
Subjt:  SPYGYGKMPRFRRSMRYMPY

Q9LX90 Polyadenylate-binding protein 32.0e-8980.09Show/hide
Query:  MEEEEHEVYGGEIPVEGEM---EGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQAGKEETDSRSVFVGNVDYAC
        MEEEEHEVYGGEIP  G+    + D+DMSA D+DAV EL EMK+RLKEMEEEAAALREMQAKVEKEMGA QDPA  +A+Q GKEE D+RSV+VGNVDYAC
Subjt:  MEEEEHEVYGGEIPVEGEM---EGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQAGKEETDSRSVFVGNVDYAC

Query:  TPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVLPKRTNVPGMKQYRARRYNPYVG--FRRPYAPPYFYSPYG
        TPEEVQ HFQ+CGTVNRVTIL DKFGQPKGFAYVEF+E EAVQEAL LNESELHGRQLKV PKRTNVPGMKQY   R+NP +G  FRRP+ PPYFYSPYG
Subjt:  TPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVLPKRTNVPGMKQYRARRYNPYVG--FRRPYAPPYFYSPYG

Query:  YGKMPRFRRSMRYMPY
        YGK PRFRR MRYMPY
Subjt:  YGKMPRFRRSMRYMPY

Arabidopsis top hitse value%identityAlignment
AT5G10350.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.4e-9080.09Show/hide
Query:  MEEEEHEVYGGEIPVEGEM---EGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQAGKEETDSRSVFVGNVDYAC
        MEEEEHEVYGGEIP  G+    + D+DMSA D+DAV EL EMK+RLKEMEEEAAALREMQAKVEKEMGA QDPA  +A+Q GKEE D+RSV+VGNVDYAC
Subjt:  MEEEEHEVYGGEIPVEGEM---EGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQAGKEETDSRSVFVGNVDYAC

Query:  TPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVLPKRTNVPGMKQYRARRYNPYVG--FRRPYAPPYFYSPYG
        TPEEVQ HFQ+CGTVNRVTIL DKFGQPKGFAYVEF+E EAVQEAL LNESELHGRQLKV PKRTNVPGMKQY   R+NP +G  FRRP+ PPYFYSPYG
Subjt:  TPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVLPKRTNVPGMKQYRARRYNPYVG--FRRPYAPPYFYSPYG

Query:  YGKMPRFRRSMRYMPY
        YGK PRFRR MRYMPY
Subjt:  YGKMPRFRRSMRYMPY

AT5G10350.2 RNA-binding (RRM/RBD/RNP motifs) family protein5.0e-8379.7Show/hide
Query:  MEEEEHEVYGGEIPVEGEM---EGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQAGKEETDSRSVFVGNVDYAC
        MEEEEHEVYGGEIP  G+    + D+DMSA D+DAV EL EMK+RLKEMEEEAAALREMQAKVEKEMGA QDPA  +A+Q GKEE D+RSV+VGNVDYAC
Subjt:  MEEEEHEVYGGEIPVEGEM---EGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQAGKEETDSRSVFVGNVDYAC

Query:  TPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVLPKRTNVPGMKQYRARRYNPYVG--FRRPYAPPYFYSPYG
        TPEEVQ HFQ+CGTVNRVTIL DKFGQPKGFAYVEF+E EAVQEAL LNESELHGRQLKV PKRTNVPGMKQY   R+NP +G  FRRP+ PPYFYSPYG
Subjt:  TPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVLPKRTNVPGMKQYRARRYNPYVG--FRRPYAPPYFYSPYG

Query:  YG
        YG
Subjt:  YG

AT5G51120.1 polyadenylate-binding protein 11.5e-7166.08Show/hide
Query:  EEEEHEVYGGEIP--VEGEME--------GDVDMSAGDDD-----AVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQAGKEETDSR
        +E+EHEVYGGEIP   EGEM+        G+   +AGD++     + ++L++MKKR+KE+EEEA ALREMQAK EK+MGA QDP+G   S A KEE DSR
Subjt:  EEEEHEVYGGEIP--VEGEME--------GDVDMSAGDDD-----AVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQAGKEETDSR

Query:  SVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVLPKRTNVPGMKQY--RARRYNPYVGFRRP
        S++VGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEF+E EAVQ +L+LNESELHGRQ+KV  KRTNVPGM+Q+  R R + P  GF  P
Subjt:  SVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVLPKRTNVPGMKQY--RARRYNPYVGFRRP

Query:  YAPPYFYSPYGYGKMPRFRRSMRYMPY
          P  FY PY YG++PRFRR MRY PY
Subjt:  YAPPYFYSPYGYGKMPRFRRSMRYMPY

AT5G51120.2 polyadenylate-binding protein 16.1e-6555.68Show/hide
Query:  EEEEHEVYGGEIP--VEGEME--------GDVDMSAGDDD-----AVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQ------------------
        +E+EHEVYGGEIP   EGEM+        G+   +AGD++     + ++L++MKKR+KE+EEEA ALREMQAK EK+MGA Q                  
Subjt:  EEEEHEVYGGEIP--VEGEME--------GDVDMSAGDDD-----AVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQ------------------

Query:  -------------------DPAGTSASQAGKEETDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALVLNESE
                           +   +  S A KEE DSRS++VGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEF+E EAVQ +L+LNESE
Subjt:  -------------------DPAGTSASQAGKEETDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALVLNESE

Query:  LHGRQLKVLPKRTNVPGMKQY--RARRYNPYVGFRRPYAPPYFYSPYGYGKMPRFRRSMRYMPY
        LHGRQ+KV  KRTNVPGM+Q+  R R + P  GF  P  P  FY PY YG++PRFRR MRY PY
Subjt:  LHGRQLKVLPKRTNVPGMKQY--RARRYNPYVGFRRPYAPPYFYSPYGYGKMPRFRRSMRYMPY

AT5G65260.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.1e-9381.82Show/hide
Query:  MEEEEHEVYGGEIPVEGEMEG-------DVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQAGKEETDSRSVFVGNV
        MEEEEHEVYGGEIP  GEM+G       D+DM+A DDDAVKELDEMKKRLKEME+EAAALREMQAKVEKEMGA QDPA  +A+QAGKEE D+RSVFVGNV
Subjt:  MEEEEHEVYGGEIPVEGEMEG-------DVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQAGKEETDSRSVFVGNV

Query:  DYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVLPKRTNVPGMKQYRARRYNPYVG--FRRPYAPPYFY
        DYACTPEEVQQHFQ+CGTV+RVTILTDKFGQPKGFAYVEF+E EAVQEAL LNESELHGRQLKVL KRTNVPG+KQ+R RR+NPY+G  FRRP+  PY Y
Subjt:  DYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVLPKRTNVPGMKQYRARRYNPYVG--FRRPYAPPYFY

Query:  SPYGYGKMPRFRRSMRYMPY
        SPYGYGK PRFRR MRYMPY
Subjt:  SPYGYGKMPRFRRSMRYMPY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGTTCTACGCATCGAACGAGGAGATTTCTAGAAACCAAAGCGAAATTGTGAGCGAACGAGATATGGAGGAAGAGGAGCACGAGGTATACGGTGGAGAAATCCCAGT
TGAAGGGGAGATGGAAGGAGACGTTGACATGTCTGCCGGCGACGACGACGCTGTCAAGGAGCTTGACGAGATGAAAAAGCGCTTGAAGGAGATGGAGGAAGAAGCAGCGG
CTCTTCGAGAAATGCAGGCTAAGGTTGAAAAAGAAATGGGAGCTGTGCAAGATCCTGCTGGTACATCAGCTAGTCAAGCAGGCAAGGAGGAGACTGATTCACGATCAGTA
TTTGTTGGCAATGTTGACTATGCATGCACACCCGAAGAAGTGCAACAGCATTTCCAATCCTGTGGTACTGTCAACAGAGTGACTATTTTAACTGATAAATTTGGTCAGCC
GAAGGGCTTTGCCTATGTAGAATTTCTTGAAGCTGAAGCTGTTCAAGAGGCTCTCGTTCTGAATGAATCTGAGCTACATGGGCGGCAACTGAAGGTTTTGCCCAAGAGAA
CAAATGTTCCTGGTATGAAGCAATATCGTGCACGTCGCTATAACCCGTACGTGGGATTTAGGAGACCTTATGCACCACCATATTTCTATTCACCTTATGGATACGGGAAG
ATGCCCCGGTTTCGAAGGTCCATGAGGTACATGCCTTATTATTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAGTTCTACGCATCGAACGAGGAGATTTCTAGAAACCAAAGCGAAATTGTGAGCGAACGAGATATGGAGGAAGAGGAGCACGAGGTATACGGTGGAGAAATCCCAGT
TGAAGGGGAGATGGAAGGAGACGTTGACATGTCTGCCGGCGACGACGACGCTGTCAAGGAGCTTGACGAGATGAAAAAGCGCTTGAAGGAGATGGAGGAAGAAGCAGCGG
CTCTTCGAGAAATGCAGGCTAAGGTTGAAAAAGAAATGGGAGCTGTGCAAGATCCTGCTGGTACATCAGCTAGTCAAGCAGGCAAGGAGGAGACTGATTCACGATCAGTA
TTTGTTGGCAATGTTGACTATGCATGCACACCCGAAGAAGTGCAACAGCATTTCCAATCCTGTGGTACTGTCAACAGAGTGACTATTTTAACTGATAAATTTGGTCAGCC
GAAGGGCTTTGCCTATGTAGAATTTCTTGAAGCTGAAGCTGTTCAAGAGGCTCTCGTTCTGAATGAATCTGAGCTACATGGGCGGCAACTGAAGGTTTTGCCCAAGAGAA
CAAATGTTCCTGGTATGAAGCAATATCGTGCACGTCGCTATAACCCGTACGTGGGATTTAGGAGACCTTATGCACCACCATATTTCTATTCACCTTATGGATACGGGAAG
ATGCCCCGGTTTCGAAGGTCCATGAGGTACATGCCTTATTATTAGATGATGCCACATCATTGTTCAGGTTTAATAAGTTTGTCCTGAAAGAGTTGGCAGTTGCTTTTGAT
CCTCGAGAGAATAGAGAAAGGATATATGTCTATATTCATGTTATATTGTTATCTGTCTATTGCTTTTGTTATCTTGGATATAAATTACTTTGCCGTTTCAATAAGTATAT
ATATATATTTTTT
Protein sequenceShow/hide protein sequence
MQFYASNEEISRNQSEIVSERDMEEEEHEVYGGEIPVEGEMEGDVDMSAGDDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQAGKEETDSRSV
FVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEAEAVQEALVLNESELHGRQLKVLPKRTNVPGMKQYRARRYNPYVGFRRPYAPPYFYSPYGYGK
MPRFRRSMRYMPYY