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CSPI04G04580 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G04580
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionProtein UPSTREAM OF FLC
Genome locationChr4:2983285..2985569
RNA-Seq ExpressionCSPI04G04580
SyntenyCSPI04G04580
Gene Ontology termsGO:0051258 - protein polymerization (biological process)
GO:0051302 - regulation of cell division (biological process)
GO:0090708 - specification of plant organ axis polarity (biological process)
GO:2000067 - regulation of root morphogenesis (biological process)
GO:0031234 - extrinsic component of cytoplasmic side of plasma membrane (cellular component)
InterPro domainsIPR010369 - Protein SOSEKI


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8637152.1 hypothetical protein CSA_004634 [Cucumis sativus]3.6e-2496.61Show/hide
Query:  MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPNHPLRLKGTL
        MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPNHPLRLK  L
Subjt:  MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPNHPLRLKGTL

XP_011653119.2 protein UPSTREAM OF FLC isoform X2 [Cucumis sativus]3.6e-2496.61Show/hide
Query:  MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPNHPLRLKGTL
        MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPNHPLRLK  L
Subjt:  MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPNHPLRLKGTL

XP_031739671.1 protein UPSTREAM OF FLC isoform X3 [Cucumis sativus]2.5e-2598.31Show/hide
Query:  MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPNHPLRLKGTL
        MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPNHPLRLKGT+
Subjt:  MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPNHPLRLKGTL

XP_031745649.1 uncharacterized protein LOC116406091 isoform X1 [Cucumis sativus]3.6e-2496.61Show/hide
Query:  MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPNHPLRLKGTL
        MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPNHPLRLK  L
Subjt:  MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPNHPLRLKGTL

XP_031745652.1 uncharacterized protein LOC116406091 isoform X3 [Cucumis sativus]2.5e-2598.31Show/hide
Query:  MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPNHPLRLKGTL
        MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPNHPLRLKGT+
Subjt:  MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPNHPLRLKGTL

TrEMBL top hitse value%identityAlignment
A0A0A0KXS9 Uncharacterized protein1.7e-2496.61Show/hide
Query:  MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPNHPLRLKGTL
        MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPNHPLRLK  L
Subjt:  MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPNHPLRLKGTL

A0A5A7SXF0 Protein UPSTREAM OF FLC1.5e-1585.71Show/hide
Query:  MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPNHPLRLK
        MEEKDRD  HRHH  RDSPTPMKKA   YYISRNGRLEQPHFLEIPLFP+HPLRLK
Subjt:  MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPNHPLRLK

A0A5D3CZG1 Protein UPSTREAM OF FLC1.6e-1483.93Show/hide
Query:  MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPNHPLRLK
        MEEKDRD  HRHH  RDSPTPMKKA   YYISRNGRLEQPHFLEI LFP+HPLRLK
Subjt:  MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPNHPLRLK

A0A6J1FUF7 protein UPSTREAM OF FLC isoform X29.3e-1054.55Show/hide
Query:  MEEKDR-----DHHHRHHRRRD-------------SPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPNHPLRLKGTL
        MEE+ R     +  H  HRRR              +P PMKK QVFYY+SRNGRLEQPHFLEI LFPN PLRLK  +
Subjt:  MEEKDR-----DHHHRHHRRRD-------------SPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPNHPLRLKGTL

A0A6J1IY41 protein UPSTREAM OF FLC isoform X21.8e-0878.95Show/hide
Query:  MKKAQVFYYISRNGRLEQPHFLEIPLFPNHPLRLKGTL
        MKK QVFYY+SRNGRLEQPHF+EI LFPN PLRLK  +
Subjt:  MKKAQVFYYISRNGRLEQPHFLEIPLFPNHPLRLKGTL

SwissProt top hitse value%identityAlignment
Q8GY65 Protein SOSEKI 44.3e-0446.34Show/hide
Query:  PTPMKKAQVFYYISRNGRLEQPHFLEIPLFPNHPLRLKGTL
        P+  +   V YY+SRNGRL+ PHF+E+PL  ++ L LK  +
Subjt:  PTPMKKAQVFYYISRNGRLEQPHFLEIPLFPNHPLRLKGTL

Q9LX14 Protein SOSEKI 23.3e-0440.35Show/hide
Query:  HHHRHHRRRDSPTPMKK-----AQVFYYISRNGRLEQPHFLEIPLFPNHPLRLKGTL
        +HH+H    +     KK      QV YY++RNG LE PHF+E+    N PLRL+  +
Subjt:  HHHRHHRRRDSPTPMKK-----AQVFYYISRNGRLEQPHFLEIPLFPNHPLRLKGTL

Arabidopsis top hitse value%identityAlignment
AT3G46110.1 Domain of unknown function (DUF966)3.1e-0546.34Show/hide
Query:  PTPMKKAQVFYYISRNGRLEQPHFLEIPLFPNHPLRLKGTL
        P+  +   V YY+SRNGRL+ PHF+E+PL  ++ L LK  +
Subjt:  PTPMKKAQVFYYISRNGRLEQPHFLEIPLFPNHPLRLKGTL

AT3G46110.2 Domain of unknown function (DUF966)3.1e-0546.34Show/hide
Query:  PTPMKKAQVFYYISRNGRLEQPHFLEIPLFPNHPLRLKGTL
        P+  +   V YY+SRNGRL+ PHF+E+PL  ++ L LK  +
Subjt:  PTPMKKAQVFYYISRNGRLEQPHFLEIPLFPNHPLRLKGTL

AT5G10150.1 Domain of unknown function (DUF966)2.3e-0540.35Show/hide
Query:  HHHRHHRRRDSPTPMKK-----AQVFYYISRNGRLEQPHFLEIPLFPNHPLRLKGTL
        +HH+H    +     KK      QV YY++RNG LE PHF+E+    N PLRL+  +
Subjt:  HHHRHHRRRDSPTPMKK-----AQVFYYISRNGRLEQPHFLEIPLFPNHPLRLKGTL

AT5G59790.1 Domain of unknown function (DUF966)7.6e-0440.91Show/hide
Query:  RDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPNHPLRLKGTL
        R  P   +K  V YY+ RNG+L+ PHF+E+ L  +  L LK  +
Subjt:  RDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPNHPLRLKGTL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAGAAAGACAGAGACCACCACCACCGTCACCACCGTCGCCGCGACTCTCCCACTCCGATGAAAAAAGCCCAAGTTTTTTACTATATCTCCAGAAACGGCCGTCT
GGAACAACCCCATTTTCTCGAAATCCCTCTCTTCCCCAACCACCCTCTTCGTCTCAAAGGTACGCTTCTTCTACTATTTCGAACGACACGTCGTTTTGGGTCTCATCGTA
TTCAATGTGACGACAGATGTTTTGGATCGGCTCGCTGTTCTCAGGGGCAACGCCATGCCTTTCCTCTATTCTTGGTCCTGTAA
mRNA sequenceShow/hide mRNA sequence
GCTTTGTTTTGTAAGAGGTAATGTAAGCATGTAAAATCACATCCGTACATTCTGGATTCAAAATTAACTTCTTCCTCCCTCATTCATAGGGATCCGAGCCTTCTCCCCTT
CTCTACAATTACCCTCAGCTTCTTCCAATTCCCCCAAATCCCATCTTTTTCCCGTAAAATATTAATACTCTTCTCCTTCTTCTTCTTCTACTGGACAACCTCTCTCCCTC
TCACCCATCCATAACCATGGAGGAGAAAGACAGAGACCACCACCACCGTCACCACCGTCGCCGCGACTCTCCCACTCCGATGAAAAAAGCCCAAGTTTTTTACTATATCT
CCAGAAACGGCCGTCTGGAACAACCCCATTTTCTCGAAATCCCTCTCTTCCCCAACCACCCTCTTCGTCTCAAAGGTACGCTTCTTCTACTATTTCGAACGACACGTCGT
TTTGGGTCTCATCGTATTCAATGTGACGACAGATGTTTTGGATCGGCTCGCTGTTCTCAGGGGCAACGCCATGCCTTTCCTCTATTCTTGGTCCTGTAAAAGGTATAAAA
ATGAAAAAGAGAAAGGAGGAAAAATAAAAACAGGGAGAAAACGAAGGGTGTGAAGGTGAATTTTCTGTAATCTTTTTTCAATTCCTTACCTAACAGATCTCACCATTACT
AGCCCATCACGCGTACGGAAACGGATGGGAAGTTTGTGGATACTCATGATGCATGTTTTCTTCTGTACATCTCTAATTTTTCTTTCAATCCTTGCCTAATTACTATTCTC
AGATCTTTGCTTTGTTAAATATCTTTATTCCTTCCTACACTTACATAGAATCTAAACCGAATACTCCCCTTATATAAACCCTCAATTGACACAATACATCCACACAAACA
AACGCAAAAGGTTTAACATGACTTTCTTTGCCAAGTTTATCGTTCTTTTTTTTCTTTTAGCTATTGCTTCTTCATCCCATGATCTAGAAGCGAGGCAATATAAGTTGGAT
GGCATGGCATTCTCATGTTTGAATTCCTTGCTTAAAATTCGTACGTGCATCAAGGATGTTCGAGTAGAGTATAGAGCGTGAGTGTTTGCCAGATTTGTTGAATCTCATGG
GCTTCTCACCAAAGGAGGTCAGGATTATTGATGACCATTGCAATATTGGGACCAAGATCCACTAAGCTGTTTCTTCACATCACTTCTCCAGAAAATGTTTTATCTTTTTA
AATAAAATAATGTTTGTCTGTGTCTGTTTGTTTGTTTTTGTTTTAAATATATATACAAGTGTGTTTGGGCCTTCCATGTATTTTATTTTCTGTCAAATTTAAATCATGTC
AATGCCCTCGATGGTACTGTGGGGGTTTTATGTATGTTTATGATTATATCTATGATGGCCGTTTAAGTTCTATAATTGACTTGTGCACTCTCTAAATTTTCTTTTCTTTT
CTTTTACAAAAACATAAGTATTATATTTCTAAATTTTCT
Protein sequenceShow/hide protein sequence
MEEKDRDHHHRHHRRRDSPTPMKKAQVFYYISRNGRLEQPHFLEIPLFPNHPLRLKGTLLLLFRTTRRFGSHRIQCDDRCFGSARCSQGQRHAFPLFLVL