; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI04G05030 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G05030
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description40S ribosomal protein SA
Genome locationChr4:3381534..3384017
RNA-Seq ExpressionCSPI04G05030
SyntenyCSPI04G05030
Gene Ontology termsGO:0000028 - ribosomal small subunit assembly (biological process)
GO:0002181 - cytoplasmic translation (biological process)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001865 - Ribosomal protein S2
IPR005707 - Ribosomal protein S2, eukaryotic/archaeal
IPR018130 - Ribosomal protein S2, conserved site
IPR023591 - Ribosomal protein S2, flavodoxin-like domain superfamily
IPR027498 - Ribosomal protein S2, eukaryotic


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600605.1 40S ribosomal protein SA, partial [Cucurbita argyrosperma subsp. sororia]3.7e-14988.45Show/hide
Query:  MATGTEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPEDIIVQSARPYGQRAVLKFAQYTGAHA
        MATGTEQRQL+QKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATGTEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPEDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPG+KWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVM

Query:  VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQWVPDAQWGAPNVAPTAAAAS----VSNAEWAQESVR---AADGWGVAIPPPAPSLEAAAP
        VDLFFYREPEE KEKEEE+AVAPPDYGIADFG+APL  D+WV DAQW AP++ P AAAA+    VSN EWA E V    AADGW VA  PPAP LEA AP
Subjt:  VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQWVPDAQWGAPNVAPTAAAAS----VSNAEWAQESVR---AADGWGVAIPPPAPSLEAAAP

Query:  PAS
        PA+
Subjt:  PAS

XP_008453731.1 PREDICTED: 40S ribosomal protein SA-like [Cucumis melo]1.4e-16496.98Show/hide
Query:  MATGTEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPEDIIVQSARPYGQRAVLKFAQYTGAHA
        MATG EQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENP DIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATGTEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPEDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVM

Query:  VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQWVPDAQWGAPNVAPTAAAASVSNAEWAQESVRAADGWGVAIPPPAPSLEAAAPPASDW
        VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQWVPDAQW A NVAPTAAAASVSN EWAQE V AADGWGVAIPPPAPSLEA APP+SDW
Subjt:  VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQWVPDAQWGAPNVAPTAAAASVSNAEWAQESVRAADGWGVAIPPPAPSLEAAAPPASDW

XP_011653139.1 40S ribosomal protein SA [Cucumis sativus]1.6e-16898.99Show/hide
Query:  MATGTEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPEDIIVQSARPYGQRAVLKFAQYTGAHA
        MATGTEQ QLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATGTEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPEDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVM

Query:  VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQWVPDAQWGAPNVAPTAAAASVSNAEWAQESVRAADGWGVAIPPPAPSLEAAAPPASDW
        VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAP+AVDQWVPDAQWGAPNVAPTAAAASVSNAEWAQESVRAADGWGVAIPPPAPSLEAAAPPASDW
Subjt:  VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQWVPDAQWGAPNVAPTAAAASVSNAEWAQESVRAADGWGVAIPPPAPSLEAAAPPASDW

XP_022136902.1 40S ribosomal protein SA-like [Momordica charantia]6.7e-15189.7Show/hide
Query:  MATGTEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPEDIIVQSARPYGQRAVLKFAQYTGAHA
        MATGT QRQLSQKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTW+KLQMAARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATGTEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPEDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT+R G+KWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVM

Query:  VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQWVPDAQWGAPNVAPTAAAASVSNAEWAQESVR--AADGWGVAIP-PPAPSLEAAAPPASD
        VDLFFYREPEE KE EEEEAVAPPDYGIADFG+APLAVDQW PDAQWGA +V P AAAA  SN EWAQE V   AADGW  A+  PPAP +EA APPASD
Subjt:  VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQWVPDAQWGAPNVAPTAAAASVSNAEWAQESVR--AADGWGVAIP-PPAPSLEAAAPPASD

Query:  W
        W
Subjt:  W

XP_022942879.1 40S ribosomal protein SA-like [Cucurbita moschata]2.1e-14989.04Show/hide
Query:  MATGTEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPEDIIVQSARPYGQRAVLKFAQYTGAHA
        MATGTEQRQL+QKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATGTEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPEDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPG+KWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVM

Query:  VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQWVPDAQWGAPNVAPTAAAAS--VSNAEWAQESVR---AADGWGVAIPPPAPSLEAAAPPA
        VDLFFYREPEE KEKEEE+AVAPPDYGIADFG+APL  D+WV DAQW AP++ P AAAA+  VSN EWA E V    AADGW VA  PPAP LEA APPA
Subjt:  VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQWVPDAQWGAPNVAPTAAAAS--VSNAEWAQESVR---AADGWGVAIPPPAPSLEAAAPPA

Query:  S
        +
Subjt:  S

TrEMBL top hitse value%identityAlignment
A0A0A0KUD9 40S ribosomal protein SA7.7e-16998.99Show/hide
Query:  MATGTEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPEDIIVQSARPYGQRAVLKFAQYTGAHA
        MATGTEQ QLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATGTEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPEDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVM

Query:  VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQWVPDAQWGAPNVAPTAAAASVSNAEWAQESVRAADGWGVAIPPPAPSLEAAAPPASDW
        VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAP+AVDQWVPDAQWGAPNVAPTAAAASVSNAEWAQESVRAADGWGVAIPPPAPSLEAAAPPASDW
Subjt:  VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQWVPDAQWGAPNVAPTAAAASVSNAEWAQESVRAADGWGVAIPPPAPSLEAAAPPASDW

A0A1S3BXR8 40S ribosomal protein SA6.7e-16596.98Show/hide
Query:  MATGTEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPEDIIVQSARPYGQRAVLKFAQYTGAHA
        MATG EQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENP DIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATGTEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPEDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVM

Query:  VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQWVPDAQWGAPNVAPTAAAASVSNAEWAQESVRAADGWGVAIPPPAPSLEAAAPPASDW
        VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQWVPDAQW A NVAPTAAAASVSN EWAQE V AADGWGVAIPPPAPSLEA APP+SDW
Subjt:  VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQWVPDAQWGAPNVAPTAAAASVSNAEWAQESVRAADGWGVAIPPPAPSLEAAAPPASDW

A0A5A7TNP4 40S ribosomal protein SA6.7e-16596.98Show/hide
Query:  MATGTEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPEDIIVQSARPYGQRAVLKFAQYTGAHA
        MATG EQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENP DIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATGTEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPEDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVM

Query:  VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQWVPDAQWGAPNVAPTAAAASVSNAEWAQESVRAADGWGVAIPPPAPSLEAAAPPASDW
        VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQWVPDAQW A NVAPTAAAASVSN EWAQE V AADGWGVAIPPPAPSLEA APP+SDW
Subjt:  VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQWVPDAQWGAPNVAPTAAAASVSNAEWAQESVRAADGWGVAIPPPAPSLEAAAPPASDW

A0A6J1C6Q9 40S ribosomal protein SA3.2e-15189.7Show/hide
Query:  MATGTEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPEDIIVQSARPYGQRAVLKFAQYTGAHA
        MATGT QRQLSQKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTW+KLQMAARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATGTEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPEDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT+R G+KWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVM

Query:  VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQWVPDAQWGAPNVAPTAAAASVSNAEWAQESVR--AADGWGVAIP-PPAPSLEAAAPPASD
        VDLFFYREPEE KE EEEEAVAPPDYGIADFG+APLAVDQW PDAQWGA +V P AAAA  SN EWAQE V   AADGW  A+  PPAP +EA APPASD
Subjt:  VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQWVPDAQWGAPNVAPTAAAASVSNAEWAQESVR--AADGWGVAIP-PPAPSLEAAAPPASD

Query:  W
        W
Subjt:  W

A0A6J1FSL7 40S ribosomal protein SA1.0e-14989.04Show/hide
Query:  MATGTEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPEDIIVQSARPYGQRAVLKFAQYTGAHA
        MATGTEQRQL+QKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATGTEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPEDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPG+KWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVM

Query:  VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQWVPDAQWGAPNVAPTAAAAS--VSNAEWAQESVR---AADGWGVAIPPPAPSLEAAAPPA
        VDLFFYREPEE KEKEEE+AVAPPDYGIADFG+APL  D+WV DAQW AP++ P AAAA+  VSN EWA E V    AADGW VA  PPAP LEA APPA
Subjt:  VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQWVPDAQWGAPNVAPTAAAAS--VSNAEWAQESVR---AADGWGVAIPPPAPSLEAAAPPA

Query:  S
        +
Subjt:  S

SwissProt top hitse value%identityAlignment
A5BUU4 40S ribosomal protein SA5.5e-12474.68Show/hide
Query:  MATGTEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPEDIIVQSARPYGQRAVLKFAQYTGAHA
        MAT T  R LSQKE DIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKLQ+AARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATGTEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPEDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVM
        IAGRHTPGTFTNQLQTSF+EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMR T+ PG+KWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVM

Query:  VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAP---LAVDQW---VPDA-QWGA--PNVAPTAAAASVSNAEWAQESVR------AADGWGVAIPPPA
        VDLFFYREPEE KE+E +E VA PDYGI D+ +     L    W   + DA QWGA  P VAP  A   V  + W   +        A DGW  A  PP 
Subjt:  VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAP---LAVDQW---VPDA-QWGA--PNVAPTAAAASVSNAEWAQESVR------AADGWGVAIPPPA

Query:  ---PSLEAAAPPASDW
           P +    PP + W
Subjt:  ---PSLEAAAPPASDW

O22518 40S ribosomal protein SA1.3e-12579.37Show/hide
Query:  ATGTEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPEDIIVQSARPYGQRAVLKFAQYTGAHAI
        A     RQLSQKEADIQMMLAA+VHLGTKNCDFQMERY+FKRRNDGIYIINLGKTWEKLQ+AARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTGAHAI
Subjt:  ATGTEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPEDIIVQSARPYGQRAVLKFAQYTGAHAI

Query:  AGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVMV
        AGRHTPGTFTNQLQTSF+EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT+RPG KWDVMV
Subjt:  AGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVMV

Query:  DLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVD-QW--VPDAQWGAPNVAPTAAAASVSNAEWAQESVRAADGWGVAIPPP
        DLFFYREPEE K++EEEEA A  DY I DF +  +A D QW    D  W      P  A   V+    A+    A   WG A+PPP
Subjt:  DLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVD-QW--VPDAQWGAPNVAPTAAAASVSNAEWAQESVRAADGWGVAIPPP

O65751 40S ribosomal protein SA8.0e-12375.33Show/hide
Query:  MATGT-EQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPEDIIVQSARPYGQRAVLKFAQYTGAH
        MAT T   RQL+QKEADIQMMLAA+VHLGTKNC+FQMERY+FKRRNDGIYIINLGKTW+KL +AAR+IVAIEN +DIIVQSARPYGQRAVLKFAQYTGAH
Subjt:  MATGT-EQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPEDIIVQSARPYGQRAVLKFAQYTGAH

Query:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDV
        AIAGRHTPGTFTNQLQTSF+EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPM YVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT+RPG KWDV
Subjt:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDV

Query:  MVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVD-QW--VPDAQWGAPNVAPTAAAASVSNAEWAQESVRAADGWGVAIPPP--APSLEAAAPP
        MVDLFFYREPEE K+ EE+E VA PDY IADF  + +  D QW    D  W      P  A  +V+   WA     A D WG A+PPP   P+    + P
Subjt:  MVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVD-QW--VPDAQWGAPNVAPTAAAASVSNAEWAQESVRAADGWGVAIPPP--APSLEAAAPP

Query:  ASDW
        A+ W
Subjt:  ASDW

O80377 40S ribosomal protein SA6.1e-12375.84Show/hide
Query:  MATGTEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPEDIIVQSARPYGQRAVLKFAQYTGAHA
        MA+G   R+LS  EADIQMM AAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL +AARVIV+IENP+DIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATGTEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPEDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVM
        IAGRHTPGTFTNQLQTSF+EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRG +  G+KW+VM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVM

Query:  VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPL-AVDQW--VPDAQWGAPNVAPTAAAASVSNAEWAQESVRAADGWGVAIPPPAPSLEAAAPPA
        VDLFFYREPEE K++EEE+ +   DY +AD+ +AP+   DQW  +PDAQWG   V P  A ++V    W      A DGW  A  PP P       PA
Subjt:  VDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPL-AVDQW--VPDAQWGAPNVAPTAAAASVSNAEWAQESVRAADGWGVAIPPPAPSLEAAAPPA

Q08682 40S ribosomal protein Sa-11.3e-11772.48Show/hide
Query:  QLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPEDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPG
        QLSQKEAD++MM AAEVHLGTKNC++QMERYVFKRRNDGIYI NLGKTWEKLQMAARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTGA+AIAGRHTPG
Subjt:  QLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPEDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPG

Query:  TFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVMVDLFFYRE
        TFTNQ+QTSF+EPRLLILTDPRTDHQPIKE ALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMRGT+  G KWDVMVDLFFYRE
Subjt:  TFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVMVDLFFYRE

Query:  PEEVKEKEEEEAVAPPDYG---IADFGSAPLAVDQW----VPDAQWGAPNVAPTAAAASVSNAEWAQESVRAAD-GWGVAIPPPAPSLEAAAPPASDW
        PEE K ++E+EA    +YG     ++G   +  DQW    +PDA W     AP +AA +   A W+  +   AD GW  A PP       +  PA+ W
Subjt:  PEEVKEKEEEEAVAPPDYG---IADFGSAPLAVDQW----VPDAQWGAPNVAPTAAAASVSNAEWAQESVRAAD-GWGVAIPPPAPSLEAAAPPASDW

Arabidopsis top hitse value%identityAlignment
AT1G72370.1 40s ribosomal protein SA9.4e-11972.48Show/hide
Query:  QLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPEDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPG
        QLSQKEAD++MM AAEVHLGTKNC++QMERYVFKRRNDGIYI NLGKTWEKLQMAARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTGA+AIAGRHTPG
Subjt:  QLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPEDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPG

Query:  TFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVMVDLFFYRE
        TFTNQ+QTSF+EPRLLILTDPRTDHQPIKE ALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMRGT+  G KWDVMVDLFFYRE
Subjt:  TFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVMVDLFFYRE

Query:  PEEVKEKEEEEAVAPPDYG---IADFGSAPLAVDQW----VPDAQWGAPNVAPTAAAASVSNAEWAQESVRAAD-GWGVAIPPPAPSLEAAAPPASDW
        PEE K ++E+EA    +YG     ++G   +  DQW    +PDA W     AP +AA +   A W+  +   AD GW  A PP       +  PA+ W
Subjt:  PEEVKEKEEEEAVAPPDYG---IADFGSAPLAVDQW----VPDAQWGAPNVAPTAAAASVSNAEWAQESVRAAD-GWGVAIPPPAPSLEAAAPPASDW

AT1G72370.2 40s ribosomal protein SA1.4e-11772.39Show/hide
Query:  QLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPEDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPG
        QLSQKEAD++MM AAEVHLGTKNC++QMERYVFKRRNDGIYI NLGKTWEKLQMAARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTGA+AIAGRHTPG
Subjt:  QLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPEDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPG

Query:  TFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVMVDLFFYRE
        TFTNQ+QTSF+EPRLLILTDPRTDHQPIKE ALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMRGT+  G KWDVMVDLFFYRE
Subjt:  TFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVMVDLFFYRE

Query:  PEEVKEKEEEEAVAPPDYG---IADFGSAPLAVDQW----VPDAQWGAPNVAPTAAAASVSNAEWAQESVRAADGWGVAIPPPAPSLEAAAPPASDW
        PEE K ++E+EA    +YG     ++G   +  DQW    +PDA W     AP +AA +   A W+     A  GW  A PP       +  PA+ W
Subjt:  PEEVKEKEEEEAVAPPDYG---IADFGSAPLAVDQW----VPDAQWGAPNVAPTAAAASVSNAEWAQESVRAADGWGVAIPPPAPSLEAAAPPASDW

AT3G04770.1 40s ribosomal protein SA B1.8e-10187.88Show/hide
Query:  TEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPEDIIVQSARPYGQRAVLKFAQYTGAHAIAGR
        T  RQ+S+KEADIQMML+A+VHLGTKNC++QMERYVFKRR+DGIYIINLGKTW+KLQMAARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTG +AIAGR
Subjt:  TEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPEDIIVQSARPYGQRAVLKFAQYTGAHAIAGR

Query:  HTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVMVD
        HTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPM +VDIGIPANNKGKHSIGCLFWLLARMVLQMRGT+    KWDVMV+
Subjt:  HTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVMVD

AT3G04770.2 40s ribosomal protein SA B1.1e-11470.81Show/hide
Query:  TEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPEDIIVQSARPYGQRAVLKFAQYTGAHAIAGR
        T  RQ+S+KEADIQMML+A+VHLGTKNC++QMERYVFKRR+DGIYIINLGKTW+KLQMAARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTG +AIAGR
Subjt:  TEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPEDIIVQSARPYGQRAVLKFAQYTGAHAIAGR

Query:  HTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVMVDLF
        HTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPM +VDIGIPANNKGKHSIGCLFWLLARMVLQMRGT+    KWDVMVDLF
Subjt:  HTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVMVDLF

Query:  FYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQW----VPDAQWGAPNVAPTAAAASVSNAEWAQESVRAADGWGVAIPPPAPSLEAAAPPASDW
        FYREPEE K++ +EEA    DYG+       +  DQW    + DA W      P +AA +V         V  A GW           EAA+ PA+ W
Subjt:  FYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQW----VPDAQWGAPNVAPTAAAASVSNAEWAQESVRAADGWGVAIPPPAPSLEAAAPPASDW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACTGGTACAGAACAGCGTCAACTCTCACAGAAGGAGGCCGACATTCAGATGATGTTGGCCGCCGAGGTTCATCTAGGCACTAAAAACTGCGACTTCCAAATGGA
GCGATACGTTTTCAAGCGCCGGAATGATGGAATCTACATTATTAACTTGGGTAAAACATGGGAGAAACTTCAGATGGCTGCTAGAGTTATTGTGGCTATTGAGAATCCTG
AAGATATTATTGTTCAATCTGCTAGGCCTTATGGTCAGAGAGCTGTTTTGAAGTTTGCTCAATACACTGGTGCTCATGCAATTGCTGGGAGGCATACCCCTGGAACATTC
ACCAACCAGCTTCAAACCTCATTCAATGAGCCACGCCTTCTGATATTGACTGATCCTCGAACTGATCATCAGCCCATCAAGGAAGCTGCCCTTGGAAACATTCCCACAAT
TGCCTTTTGCGACACTGATTCGCCAATGCGGTATGTTGACATTGGGATTCCAGCTAATAACAAGGGGAAACACAGCATAGGATGTCTATTCTGGCTTCTTGCGAGGATGG
TTTTGCAGATGCGTGGAACGGTTCGTCCTGGGTACAAATGGGACGTGATGGTCGATTTGTTTTTCTACCGAGAGCCTGAGGAGGTGAAGGAGAAAGAGGAAGAAGAAGCT
GTTGCACCACCAGATTACGGCATTGCAGATTTTGGTTCTGCTCCATTGGCTGTAGATCAATGGGTTCCTGATGCTCAGTGGGGTGCTCCTAATGTGGCTCCTACTGCTGC
GGCTGCTTCAGTTTCTAATGCTGAGTGGGCACAAGAGTCAGTCAGAGCAGCAGACGGATGGGGTGTTGCCATACCACCACCGGCACCTTCACTTGAAGCTGCTGCACCTC
CTGCCTCCGATTGGTAA
mRNA sequenceShow/hide mRNA sequence
AACAGCCCTCTTCTTCCGTTCGCCGAATCCAACTCCTACTACTATATTTCTGCGCCGGCGGCGGCGGCGGCAGGGTGCGCTCTCTTGAACACATATTCCAGGTTTGGCAA
TGGCGACTGGTACAGAACAGCGTCAACTCTCACAGAAGGAGGCCGACATTCAGATGATGTTGGCCGCCGAGGTTCATCTAGGCACTAAAAACTGCGACTTCCAAATGGAG
CGATACGTTTTCAAGCGCCGGAATGATGGAATCTACATTATTAACTTGGGTAAAACATGGGAGAAACTTCAGATGGCTGCTAGAGTTATTGTGGCTATTGAGAATCCTGA
AGATATTATTGTTCAATCTGCTAGGCCTTATGGTCAGAGAGCTGTTTTGAAGTTTGCTCAATACACTGGTGCTCATGCAATTGCTGGGAGGCATACCCCTGGAACATTCA
CCAACCAGCTTCAAACCTCATTCAATGAGCCACGCCTTCTGATATTGACTGATCCTCGAACTGATCATCAGCCCATCAAGGAAGCTGCCCTTGGAAACATTCCCACAATT
GCCTTTTGCGACACTGATTCGCCAATGCGGTATGTTGACATTGGGATTCCAGCTAATAACAAGGGGAAACACAGCATAGGATGTCTATTCTGGCTTCTTGCGAGGATGGT
TTTGCAGATGCGTGGAACGGTTCGTCCTGGGTACAAATGGGACGTGATGGTCGATTTGTTTTTCTACCGAGAGCCTGAGGAGGTGAAGGAGAAAGAGGAAGAAGAAGCTG
TTGCACCACCAGATTACGGCATTGCAGATTTTGGTTCTGCTCCATTGGCTGTAGATCAATGGGTTCCTGATGCTCAGTGGGGTGCTCCTAATGTGGCTCCTACTGCTGCG
GCTGCTTCAGTTTCTAATGCTGAGTGGGCACAAGAGTCAGTCAGAGCAGCAGACGGATGGGGTGTTGCCATACCACCACCGGCACCTTCACTTGAAGCTGCTGCACCTCC
TGCCTCCGATTGGTAACAAGGGAAGCTTTCCCTCTTACCCGCAATTTTGATTCATAGTTATGAGTTTCGCTTGTTCATGTAGCAGTGCCAGCATAAGTAGGCTTAAACAC
TCAGTCTGTAAACCAAAGATGTAGTACCACCCTTTTTTTTTTCTTTCTCAAGACTGATTTACGTTTTCTTTCTTCTAGTCCAGTTTTAGGTTTTAAGATTGGACGTTATT
TTTACCTTCAACGTGGGTATTTTAGTTTGGTACAATTTTTTATGAGAAACAAAAAATAGCTCCAACCGTACCAAGACGAAATACTTTGTTCTACTGATGGAATTATGTAC
CATTATTGTGTTTGTAGCGGAGAATCTGTTGCCCTTATTTCACCTCAATCTGTTGCCGCCACCATTTTTTCTATTGGCTGGAATTGTATTCCTCGGAGAATGTTATATGA
GATAATTGTCTTGTTGACTCAAAATTGAAGTCCA
Protein sequenceShow/hide protein sequence
MATGTEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPEDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTF
TNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEA
VAPPDYGIADFGSAPLAVDQWVPDAQWGAPNVAPTAAAASVSNAEWAQESVRAADGWGVAIPPPAPSLEAAAPPASDW