CuGenDBv2

Gene ID	CSPI04G05040
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	sigma intracellular receptor 2-like
Genome location	Chr4:3385999..3386589
RNA-Seq Expression	CSPI04G05040
Synteny	CSPI04G05040
Gene Ontology terms	GO:0005789 - endoplasmic reticulum membrane (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR016964 - Sigma intracellular receptor 2 IPR033118 - EXPERA domain

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6577250.1 Sigma intracellular receptor 2, partial [Cucurbita argyrosperma subsp. sororia]

2.7e-64

79.04

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Query:  MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQSLFPNIFIHFKNKYITHSGDYLMADLPPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIY
        MG +LKLFDSVLFV F VHA+APPLISAQLLLP +LFP++ I FK  YI  SGDYLMA+ PPFFVGLLWLELLLQWPLT+ NLYAI  +KSWLHTTCLIY
Subjt:  MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQSLFPNIFIHFKNKYITHSGDYLMADLPPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIY

Query:  GVSLFSAMAAIAAELIGSQRASGILLTIYFPFLALGVLAMLRGLLPRCNKATTTGHGAGPSIATKKK
        GVSLFSAMAAIAAELIGSQRASG+LL +Y PFL LGVLA LRGL+PRC+KAT TG   GPSIA KKK
Subjt:  GVSLFSAMAAIAAELIGSQRASGILLTIYFPFLALGVLAMLRGLLPRCNKATTTGHGAGPSIATKKK

XP_004149168.1 sigma intracellular receptor 2 [Cucumis sativus]

4.0e-84

98.21

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Query:  MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQSLFPNIFIHFKNKYITHSGDYLMADLPPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIY
        MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQ+LFPNIFIH KNKYITHSGDYLMADLPPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIY
Subjt:  MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQSLFPNIFIHFKNKYITHSGDYLMADLPPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIY

Query:  GVSLFSAMAAIAAELIGSQRASGILLTIYFPFLALGVLAMLRGLLPRCNKATTTGHGAGPSIATKKKA
        GVSLFSAMAAIAAELIGSQRASGILLTIYFPFLA+GVLAMLRGLLPRCNKATTTGHGAGPSIATKKKA
Subjt:  GVSLFSAMAAIAAELIGSQRASGILLTIYFPFLALGVLAMLRGLLPRCNKATTTGHGAGPSIATKKKA

XP_008453730.1 PREDICTED: transmembrane protein 97-like [Cucumis melo]

8.9e-76

89.29

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Query:  MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQSLFPNIFIHFKNKYITHSGDYLMADLPPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIY
        MG+ LKLF+SVLFVFFLVHALAPPLI AQLLLPQ+LFP+I IHFKN+YITHSGDYLMA+ PPFF+GLLWLELLLQWPLTLLNLYAI T+KSWLHTTCLIY
Subjt:  MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQSLFPNIFIHFKNKYITHSGDYLMADLPPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIY

Query:  GVSLFSAMAAIAAELIGSQRASGILLTIYFPFLALGVLAMLRGLLPRCNKATTTGHGAGPSIATKKKA
        GVSLFSAMAAIAAELIGSQRASGILLTIY PFL LGV AMLRGLLP C KATTTGHGAGPSIATKKKA
Subjt:  GVSLFSAMAAIAAELIGSQRASGILLTIYFPFLALGVLAMLRGLLPRCNKATTTGHGAGPSIATKKKA

XP_022929300.1 sigma intracellular receptor 2-like [Cucurbita moschata]

3.5e-64

77.84

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Query:  MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQSLFPNIFIHFKNKYITHSGDYLMADLPPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIY
        MG +LKLFDSVLFVF  VHA+APPLI AQLLLP +LFP++ + FK  Y+  SGDYLMA+ PPFFVGLLWLELLLQWPLT+ NLYAI  +KSWLHTTCLIY
Subjt:  MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQSLFPNIFIHFKNKYITHSGDYLMADLPPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIY

Query:  GVSLFSAMAAIAAELIGSQRASGILLTIYFPFLALGVLAMLRGLLPRCNKATTTGHGAGPSIATKKK
        GVSLFSAM AIAAELIGSQRASG+LL +Y PFL LGVLA LRGLLPRC+KAT TGH  GPSIA KKK
Subjt:  GVSLFSAMAAIAAELIGSQRASGILLTIYFPFLALGVLAMLRGLLPRCNKATTTGHGAGPSIATKKK

XP_038876784.1 sigma intracellular receptor 2-like [Benincasa hispida]

1.5e-70

82.74

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Query:  MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQSLFPNIFIHFKNKYITHSGDYLMADLPPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIY
        MGA+LKLFDS+LFV FLVHALAPPLI AQLLLPQ+LFP++ IHFKN YIT SGDYLMA+ PPFF+GLLWLELLLQWPLTLLNLYAI  +K WLHTTCLIY
Subjt:  MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQSLFPNIFIHFKNKYITHSGDYLMADLPPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIY

Query:  GVSLFSAMAAIAAELIGSQRASGILLTIYFPFLALGVLAMLRGLLPRCNKATTTGHGAGPSIATKKKA
        GVSLFSAMAAIAAEL+GSQ+ASGILL +Y PFL LGV A LRGL+PRC+KAT  GHGAGPSIATKKKA
Subjt:  GVSLFSAMAAIAAELIGSQRASGILLTIYFPFLALGVLAMLRGLLPRCNKATTTGHGAGPSIATKKKA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KZE5 EXPERA domain-containing protein

1.9e-84

98.21

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Query:  MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQSLFPNIFIHFKNKYITHSGDYLMADLPPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIY
        MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQ+LFPNIFIH KNKYITHSGDYLMADLPPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIY
Subjt:  MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQSLFPNIFIHFKNKYITHSGDYLMADLPPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIY

Query:  GVSLFSAMAAIAAELIGSQRASGILLTIYFPFLALGVLAMLRGLLPRCNKATTTGHGAGPSIATKKKA
        GVSLFSAMAAIAAELIGSQRASGILLTIYFPFLA+GVLAMLRGLLPRCNKATTTGHGAGPSIATKKKA
Subjt:  GVSLFSAMAAIAAELIGSQRASGILLTIYFPFLALGVLAMLRGLLPRCNKATTTGHGAGPSIATKKKA

A0A1S3BWY8 transmembrane protein 97-like

4.3e-76

89.29

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Query:  MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQSLFPNIFIHFKNKYITHSGDYLMADLPPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIY
        MG+ LKLF+SVLFVFFLVHALAPPLI AQLLLPQ+LFP+I IHFKN+YITHSGDYLMA+ PPFF+GLLWLELLLQWPLTLLNLYAI T+KSWLHTTCLIY
Subjt:  MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQSLFPNIFIHFKNKYITHSGDYLMADLPPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIY

Query:  GVSLFSAMAAIAAELIGSQRASGILLTIYFPFLALGVLAMLRGLLPRCNKATTTGHGAGPSIATKKKA
        GVSLFSAMAAIAAELIGSQRASGILLTIY PFL LGV AMLRGLLP C KATTTGHGAGPSIATKKKA
Subjt:  GVSLFSAMAAIAAELIGSQRASGILLTIYFPFLALGVLAMLRGLLPRCNKATTTGHGAGPSIATKKKA

A0A5D3CY30 Transmembrane protein 97-like

4.3e-76

89.29

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Query:  MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQSLFPNIFIHFKNKYITHSGDYLMADLPPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIY
        MG+ LKLF+SVLFVFFLVHALAPPLI AQLLLPQ+LFP+I IHFKN+YITHSGDYLMA+ PPFF+GLLWLELLLQWPLTLLNLYAI T+KSWLHTTCLIY
Subjt:  MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQSLFPNIFIHFKNKYITHSGDYLMADLPPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIY

Query:  GVSLFSAMAAIAAELIGSQRASGILLTIYFPFLALGVLAMLRGLLPRCNKATTTGHGAGPSIATKKKA
        GVSLFSAMAAIAAELIGSQRASGILLTIY PFL LGV AMLRGLLP C KATTTGHGAGPSIATKKKA
Subjt:  GVSLFSAMAAIAAELIGSQRASGILLTIYFPFLALGVLAMLRGLLPRCNKATTTGHGAGPSIATKKKA

A0A6J1EU13 sigma intracellular receptor 2-like

1.7e-64

77.84

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Query:  MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQSLFPNIFIHFKNKYITHSGDYLMADLPPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIY
        MG +LKLFDSVLFVF  VHA+APPLI AQLLLP +LFP++ + FK  Y+  SGDYLMA+ PPFFVGLLWLELLLQWPLT+ NLYAI  +KSWLHTTCLIY
Subjt:  MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQSLFPNIFIHFKNKYITHSGDYLMADLPPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIY

Query:  GVSLFSAMAAIAAELIGSQRASGILLTIYFPFLALGVLAMLRGLLPRCNKATTTGHGAGPSIATKKK
        GVSLFSAM AIAAELIGSQRASG+LL +Y PFL LGVLA LRGLLPRC+KAT TGH  GPSIA KKK
Subjt:  GVSLFSAMAAIAAELIGSQRASGILLTIYFPFLALGVLAMLRGLLPRCNKATTTGHGAGPSIATKKK

A0A6J1JCI5 sigma intracellular receptor 2-like

3.2e-63

76.65

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Query:  MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQSLFPNIFIHFKNKYITHSGDYLMADLPPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIY
        MG +LKLFDSVLFV   VHA+APPLI AQLLLP +LFP++ + FK  Y+  SGDYLMA+ PPFFVGLLWLELLLQWPLT+ NLYAI  +KSWLHTTCLIY
Subjt:  MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQSLFPNIFIHFKNKYITHSGDYLMADLPPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIY

Query:  GVSLFSAMAAIAAELIGSQRASGILLTIYFPFLALGVLAMLRGLLPRCNKATTTGHGAGPSIATKKK
        GVSLF+AM AIAAELIGSQRASG+LL +Y PFL LGVLA LRGLLPRC+KAT TGH  GPSIA KKK
Subjt:  GVSLFSAMAAIAAELIGSQRASGILLTIYFPFLALGVLAMLRGLLPRCNKATTTGHGAGPSIATKKK

SwissProt top hits

e value

%identity

Alignment

Q6DFQ5 Sigma intracellular receptor 2

1.0e-05

25.32

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Query:  MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQSLFPNIFIHFKNKYITHSGDYLMADLPPFFVGLLWLELLLQWPLTLLNLYA-IPTSKSWLHTTCLI
        M    +L + + F +F  H     L+  Q +LP SL+P   +     Y     D+LMA+ PP+F   ++ E +LQ P   +  YA       W+    ++
Subjt:  MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQSLFPNIFIHFKNKYITHSGDYLMADLPPFFVGLLWLELLLQWPLTLLNLYA-IPTSKSWLHTTCLI

Query:  YGVSLFSAMAAIAAELIG------------SQRASGILLTIYFPFLALGVLAML
        Y   + + + AI   ++             +Q+    L++IY P+L + VL +L
Subjt:  YGVSLFSAMAAIAAELIG------------SQRASGILLTIYFPFLALGVLAML

Arabidopsis top hits

e value

%identity

Alignment

AT1G05210.1 Transmembrane protein 97, predicted

1.3e-35

47.9

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Query:  MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQSLFPNIFIHFKNKYITHSGDYLMADLPPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIY
        MGA+ KL D  LFV+F+  A+  PLI  Q  LP  ++P      K+KYI   GDYL+ + P F VGL+W ELL  WPL++ N+YAI   KSW  TTCL+Y
Subjt:  MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQSLFPNIFIHFKNKYITHSGDYLMADLPPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIY

Query:  GVSLFSAMAAIAAELIGSQRASGILLTIYFPFLALGVLAMLRGLLPRCNKATTTGHGAGPSIATKKK
        G SL ++MAAI  ++IGS +AS  LL +Y PF+  G+LA+LRGL+ R  K  T   G   +I  ++K
Subjt:  GVSLFSAMAAIAAELIGSQRASGILLTIYFPFLALGVLAMLRGLLPRCNKATTTGHGAGPSIATKKK

AT1G05220.1 Transmembrane protein 97, predicted

3.0e-29

44.44

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Query:  MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQSLFPNIFIHFKNKYITHSGDYLMADLPPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIY
        MGA+ KL +  LF FF + A+  PL++ Q+L P  ++P +    K+ Y +   DYL  + P FFVGL+W E++   PL+++N+YAI TSKSW  TT L+Y
Subjt:  MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQSLFPNIFIHFKNKYITHSGDYLMADLPPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIY

Query:  GVSLFSAMAAIAAELIGSQRASGILLTIYFPFLALGVLAMLRGLLPRCNKATT
        G S  ++MAAI  ++IGS++ +  LL  Y PF+ L +LAMLRGL+    K +T
Subjt:  GVSLFSAMAAIAAELIGSQRASGILLTIYFPFLALGVLAMLRGLLPRCNKATT

AT1G05220.2 Transmembrane protein 97, predicted

3.0e-29

44.44

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Query:  MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQSLFPNIFIHFKNKYITHSGDYLMADLPPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIY
        MGA+ KL +  LF FF + A+  PL++ Q+L P  ++P +    K+ Y +   DYL  + P FFVGL+W E++   PL+++N+YAI TSKSW  TT L+Y
Subjt:  MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQSLFPNIFIHFKNKYITHSGDYLMADLPPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIY

Query:  GVSLFSAMAAIAAELIGSQRASGILLTIYFPFLALGVLAMLRGLLPRCNKATT
        G S  ++MAAI  ++IGS++ +  LL  Y PF+ L +LAMLRGL+    K +T
Subjt:  GVSLFSAMAAIAAELIGSQRASGILLTIYFPFLALGVLAMLRGLLPRCNKATT

AT2G32380.1 Transmembrane protein 97, predicted

1.6e-35

47.31

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Query:  MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQSLFPNIFIHFKNKYITHSGDYLMADLPPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIY
        MGA  KL D+VLF++F + A+  PLI  Q  LP  +FP   +     YI   GDYL+ + P F VGL+W ELLL WPL+++N+YAI   KSW  TT ++Y
Subjt:  MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQSLFPNIFIHFKNKYITHSGDYLMADLPPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIY

Query:  GVSLFSAMAAIAAELIGSQRASGILLTIYFPFLALGVLAMLRGLLPRCNKATTTGHGAGPSIATKKK
        G S+ ++MAAI  E+IGS +AS  LL +Y PF+ +G+LA+LRGLL + NK +    G  P+I  ++K
Subjt:  GVSLFSAMAAIAAELIGSQRASGILLTIYFPFLALGVLAMLRGLLPRCNKATTTGHGAGPSIATKKK

Sequences

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CDS sequence

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ATGGGGGCTGTTCTCAAGCTCTTCGACTCAGTTCTATTTGTGTTCTTCCTTGTACATGCATTGGCACCTCCTCTCATCAGCGCCCAGTTATTACTCCCTCAATCCCTTTT
CCCCAATATTTTCATTCATTTCAAAAATAAATACATTACCCACTCTGGAGATTATCTGATGGCCGATCTCCCTCCCTTTTTCGTCGGCTTGCTTTGGCTCGAGCTTCTTC
TTCAATGGCCACTCACGCTTCTCAACCTCTACGCCATCCCCACTTCGAAGTCATGGCTGCACACAACCTGTTTGATCTATGGCGTCTCCCTCTTCTCTGCTATGGCTGCT
ATAGCTGCTGAATTGATTGGTTCACAGAGAGCATCTGGTATACTGTTGACTATATATTTCCCTTTTTTGGCGTTGGGAGTTCTCGCCATGCTTCGTGGGTTGCTGCCGCG
TTGCAACAAGGCTACAACCACCGGCCACGGTGCTGGACCATCAATTGCTACAAAGAAAAAGGCTTGA

mRNA sequence

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Protein sequence

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MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQSLFPNIFIHFKNKYITHSGDYLMADLPPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIYGVSLFSAMAA
IAAELIGSQRASGILLTIYFPFLALGVLAMLRGLLPRCNKATTTGHGAGPSIATKKKA

CSPI04G05040 (gene) of Cucumber (PI 183967) v1 genome