; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI04G05220 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G05220
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionprotein SHI RELATED SEQUENCE 1-like
Genome locationChr4:3546526..3547797
RNA-Seq ExpressionCSPI04G05220
SyntenyCSPI04G05220
Gene Ontology termsGO:0009734 - auxin-activated signaling pathway (biological process)
GO:0009851 - auxin biosynthetic process (biological process)
GO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR006510 - Zinc finger, lateral root primordium type 1
IPR006511 - SHORT INTERNODES, C-terminal
IPR007818 - SHI protein family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7031235.1 Protein SHORT INTERNODES, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-9867.47Show/hide
Query:  MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEQQQQQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGGGGGPVT
        MAGF+PL     GGR PNYH PT TT       TT+GLFWY+NYE LE W       QQQ  Q+Q GEGFVYSGDESP RSSLVM+RSGR    GGG V 
Subjt:  MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEQQQQQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGGGGGPVT

Query:  SCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDTHYHPTSSGLDMGNFPTEVTTPAVFRCVRMTSLDETDDQY
        SCQDCGNQAKKDC+HMRCRTCCKSRGF+CETHVKSTWVPASKRR+RHLRSDG N KRP+D      SSGL+MGNFP EV++ AVFRCVRMT+LDET+DQ+
Subjt:  SCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDTHYHPTSSGLDMGNFPTEVTTPAVFRCVRMTSLDETDDQY

Query:  AYQTAVNIGGHIFKGILYDHGPEQ-----PPPPPSSS---------------------SAALLDPTPPYPTPLSTYITAGTQFFLPPSS
        AYQTAVNIGGH FKGILYDHGPEQ     PPPPP+S+                     SAALLDP PPYP PL+TY+ AGTQFFLPP+S
Subjt:  AYQTAVNIGGHIFKGILYDHGPEQ-----PPPPPSSS---------------------SAALLDPTPPYPTPLSTYITAGTQFFLPPSS

XP_004146546.1 protein SHI RELATED SEQUENCE 1 [Cucumis sativus]2.6e-15199.62Show/hide
Query:  MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEQQQQQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGGGGGPVT
        MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEQQQQQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGGGGGPVT
Subjt:  MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEQQQQQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGGGGGPVT

Query:  SCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDTHYHPTSSGLDMGNFPTEVTTPAVFRCVRMTSLDETDDQY
        SCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDTHYHPTSSGLDMGNFPTEVTTPAVFRCVRMTSLDETDDQY
Subjt:  SCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDTHYHPTSSGLDMGNFPTEVTTPAVFRCVRMTSLDETDDQY

Query:  AYQTAVNIGGHIFKGILYDHGPEQPPPPPSSSSAALLDPTPPYPTPLSTYITAGTQFFLPPSS
        AYQTAVNIGG IFKGILYDHGPEQPPPPPSSSSAALLDPTPPYPTPLSTYITAGTQFFLPPSS
Subjt:  AYQTAVNIGGHIFKGILYDHGPEQPPPPPSSSSAALLDPTPPYPTPLSTYITAGTQFFLPPSS

XP_008465489.1 PREDICTED: protein SHI RELATED SEQUENCE 1-like [Cucumis melo]5.3e-14496.23Show/hide
Query:  MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEQ-QQQQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGGGGGPV
        MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEE+ QQQQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGG GGGPV
Subjt:  MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEQ-QQQQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGGGGGPV

Query:  TSCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDTHYHPTSSGLDMGNFPTEVTTPAVFRCVRMTSLDETDDQ
        TSCQDCGNQAKKDC HMRCRTCCKSRGFECETHVKSTWVPASKRRDR LRSDGLNSKRPKDTHYHPTSSGLDM NFP EVTTPAVFRCVRMT+LDETDDQ
Subjt:  TSCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDTHYHPTSSGLDMGNFPTEVTTPAVFRCVRMTSLDETDDQ

Query:  YAYQTAVNIGGHIFKGILYDHGPEQPPPPPSSSS-AALLDPTPPYPTPLSTYITAGTQFFLPPSS
        YAYQTAVNIGGHIFKGILYDHGPEQPPPPPSSSS AALLD TPPYPTPLSTYITAGTQFFLPPSS
Subjt:  YAYQTAVNIGGHIFKGILYDHGPEQPPPPPSSSS-AALLDPTPPYPTPLSTYITAGTQFFLPPSS

XP_038881624.1 protein SHI RELATED SEQUENCE 1-like isoform X1 [Benincasa hispida]1.5e-10977.7Show/hide
Query:  MAGFFPLDGGGSGGRVPNYHFPTPTT-----GGEIIHPTTEGLFWYKNYERLETWEGEEQQQQQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGGG
        MAGFFPLDGGGS GR PNY FPT TT     GGEIIHP T+GLFWYKNYERLETW  EEQQQQ    QEQGGEGFVYSGDESPARSSLVMVRSGR  GG 
Subjt:  MAGFFPLDGGGSGGRVPNYHFPTPTT-----GGEIIHPTTEGLFWYKNYERLETWEGEEQQQQQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGGG

Query:  GGPVTSCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDTHYHPTSSGLDMGNFPTEVTTPAVFRCVRMTSLDE
        GG V SCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRR+RHLR DG N KRPKD      SSGL+MG FP EV++ AVFRCVRMT+LDE
Subjt:  GGPVTSCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDTHYHPTSSGLDMGNFPTEVTTPAVFRCVRMTSLDE

Query:  TDDQYAYQTAVNIGGHIFKGILYDHGPEQPPPPPS----------SSSAALLDPTPPYPTPLSTYITAGTQFFLPPSS
        T +Q AYQTAVNIGGHIFKGILYDHGPEQPP   S          + SA LLDP PPYPTPL+TYI AGTQFFLPP+S
Subjt:  TDDQYAYQTAVNIGGHIFKGILYDHGPEQPPPPPS----------SSSAALLDPTPPYPTPLSTYITAGTQFFLPPSS

XP_038881630.1 protein SHI RELATED SEQUENCE 1-like isoform X2 [Benincasa hispida]1.5e-10977.7Show/hide
Query:  MAGFFPLDGGGSGGRVPNYHFPTPTT-----GGEIIHPTTEGLFWYKNYERLETWEGEEQQQQQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGGG
        MAGFFPLDGGGS GR PNY FPT TT     GGEIIHP T+GLFWYKNYERLETW  EEQQQQ    QEQGGEGFVYSGDESPARSSLVMVRSGR  GG 
Subjt:  MAGFFPLDGGGSGGRVPNYHFPTPTT-----GGEIIHPTTEGLFWYKNYERLETWEGEEQQQQQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGGG

Query:  GGPVTSCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDTHYHPTSSGLDMGNFPTEVTTPAVFRCVRMTSLDE
        GG V SCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRR+RHLR DG N KRPKD      SSGL+MG FP EV++ AVFRCVRMT+LDE
Subjt:  GGPVTSCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDTHYHPTSSGLDMGNFPTEVTTPAVFRCVRMTSLDE

Query:  TDDQYAYQTAVNIGGHIFKGILYDHGPEQPPPPPS----------SSSAALLDPTPPYPTPLSTYITAGTQFFLPPSS
        T +Q AYQTAVNIGGHIFKGILYDHGPEQPP   S          + SA LLDP PPYPTPL+TYI AGTQFFLPP+S
Subjt:  TDDQYAYQTAVNIGGHIFKGILYDHGPEQPPPPPS----------SSSAALLDPTPPYPTPLSTYITAGTQFFLPPSS

TrEMBL top hitse value%identityAlignment
A0A0A0KUG2 Uncharacterized protein1.3e-15199.62Show/hide
Query:  MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEQQQQQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGGGGGPVT
        MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEQQQQQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGGGGGPVT
Subjt:  MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEQQQQQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGGGGGPVT

Query:  SCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDTHYHPTSSGLDMGNFPTEVTTPAVFRCVRMTSLDETDDQY
        SCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDTHYHPTSSGLDMGNFPTEVTTPAVFRCVRMTSLDETDDQY
Subjt:  SCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDTHYHPTSSGLDMGNFPTEVTTPAVFRCVRMTSLDETDDQY

Query:  AYQTAVNIGGHIFKGILYDHGPEQPPPPPSSSSAALLDPTPPYPTPLSTYITAGTQFFLPPSS
        AYQTAVNIGG IFKGILYDHGPEQPPPPPSSSSAALLDPTPPYPTPLSTYITAGTQFFLPPSS
Subjt:  AYQTAVNIGGHIFKGILYDHGPEQPPPPPSSSSAALLDPTPPYPTPLSTYITAGTQFFLPPSS

A0A1S3CNX3 protein SHI RELATED SEQUENCE 1-like2.6e-14496.23Show/hide
Query:  MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEQ-QQQQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGGGGGPV
        MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEE+ QQQQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGG GGGPV
Subjt:  MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEQ-QQQQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGGGGGPV

Query:  TSCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDTHYHPTSSGLDMGNFPTEVTTPAVFRCVRMTSLDETDDQ
        TSCQDCGNQAKKDC HMRCRTCCKSRGFECETHVKSTWVPASKRRDR LRSDGLNSKRPKDTHYHPTSSGLDM NFP EVTTPAVFRCVRMT+LDETDDQ
Subjt:  TSCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDTHYHPTSSGLDMGNFPTEVTTPAVFRCVRMTSLDETDDQ

Query:  YAYQTAVNIGGHIFKGILYDHGPEQPPPPPSSSS-AALLDPTPPYPTPLSTYITAGTQFFLPPSS
        YAYQTAVNIGGHIFKGILYDHGPEQPPPPPSSSS AALLD TPPYPTPLSTYITAGTQFFLPPSS
Subjt:  YAYQTAVNIGGHIFKGILYDHGPEQPPPPPSSSS-AALLDPTPPYPTPLSTYITAGTQFFLPPSS

A0A5A7TNR6 Protein SHI RELATED SEQUENCE 1-like2.6e-14496.23Show/hide
Query:  MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEQ-QQQQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGGGGGPV
        MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEE+ QQQQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGG GGGPV
Subjt:  MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEQ-QQQQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGGGGGPV

Query:  TSCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDTHYHPTSSGLDMGNFPTEVTTPAVFRCVRMTSLDETDDQ
        TSCQDCGNQAKKDC HMRCRTCCKSRGFECETHVKSTWVPASKRRDR LRSDGLNSKRPKDTHYHPTSSGLDM NFP EVTTPAVFRCVRMT+LDETDDQ
Subjt:  TSCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDTHYHPTSSGLDMGNFPTEVTTPAVFRCVRMTSLDETDDQ

Query:  YAYQTAVNIGGHIFKGILYDHGPEQPPPPPSSSS-AALLDPTPPYPTPLSTYITAGTQFFLPPSS
        YAYQTAVNIGGHIFKGILYDHGPEQPPPPPSSSS AALLD TPPYPTPLSTYITAGTQFFLPPSS
Subjt:  YAYQTAVNIGGHIFKGILYDHGPEQPPPPPSSSS-AALLDPTPPYPTPLSTYITAGTQFFLPPSS

A0A6J1FUH1 protein SHORT INTERNODES-like1.1e-9767.36Show/hide
Query:  MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEQQQQQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGGGGGPVT
        MAGFFPL     GGR PNYH PT TT       TT+GLFWY+NYE L  W       QQQ  Q+Q GEGFVYSGDESP RSSLVM+RSGR    GGG V 
Subjt:  MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEQQQQQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGGGGGPVT

Query:  SCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDTHYHPTSSGLDMGNFPTEVTTPAVFRCVRMTSLDETDDQY
        SCQDCGNQAKKDC+HMRCRTCCKSRGF+CETHVKSTWVPASKRR+RHLRSDG N KRP+D      SSGL+M NFP EV++ AVFRCVRMT+LDET+DQ+
Subjt:  SCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDTHYHPTSSGLDMGNFPTEVTTPAVFRCVRMTSLDETDDQY

Query:  AYQTAVNIGGHIFKGILYDHGPEQ----PPPPPSSS---------------------SAALLDPTPPYPTPLSTYITAGTQFFLPPSS
        AYQTAVNIGGH FKGILYDHGPEQ    PPPPP+S+                     SAALLDP PPYP PL+TY+ AGTQFFLPP+S
Subjt:  AYQTAVNIGGHIFKGILYDHGPEQ----PPPPPSSS---------------------SAALLDPTPPYPTPLSTYITAGTQFFLPPSS

A0A6J1J480 protein SHI RELATED SEQUENCE 1-like3.1e-9767.25Show/hide
Query:  MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEQQQQQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGGGGGPVT
        MAGFFPL     GGR PNYH PT T        TT+GLFWY+NYE L  W       QQQ  Q+Q GEGFVYSGDESP RSSLVM+RSGR    GGG V 
Subjt:  MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEQQQQQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGGGGGPVT

Query:  SCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDTHYHPTSSGLDMGNFPTEVTTPAVFRCVRMTSLDETDDQY
        SCQDCGNQAKKDC+HMRCRTCCKSRGF+CETHVKSTWVPASKRR+RHLRSD  N KRP+D      SSGL+MGNFP EV++ AVFRCVRMT+LDET+DQ+
Subjt:  SCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDTHYHPTSSGLDMGNFPTEVTTPAVFRCVRMTSLDETDDQY

Query:  AYQTAVNIGGHIFKGILYDHGPE---QPPPPPSSS---------------------SAALLDPTPPYPTPLSTYITAGTQFFLPPSS
        AYQTAVNIGGH FKGILYDHGPE   QPPPPP+S+                     SAALLDP PPYP PL+TY+ AGTQFFLPP+S
Subjt:  AYQTAVNIGGHIFKGILYDHGPE---QPPPPPSSS---------------------SAALLDPTPPYPTPLSTYITAGTQFFLPPSS

SwissProt top hitse value%identityAlignment
K4B6C9 Protein EXPRESSION OF TERPENOIDS 19.4e-4337.09Show/hide
Query:  MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPT-TEGLFWYKN--------------YERLETWEG--------EEQQQQQQ------PAQE-------
        MA FF L     GG     H     +  + + PT +   F Y+N              Y+  E W+         +  QQQQQ      P Q+       
Subjt:  MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPT-TEGLFWYKN--------------YERLETWEG--------EEQQQQQQ------PAQE-------

Query:  ----QGGEGF-VYSGDESPARSSLVMVRSGRGGGGGGGPVTSCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRSDGL------
                GF + +GD   +RS  VM+RSG GG        SCQDCGNQAKKDC HMRCRTCCKSRGF+C+THVKSTWVPA+KRR+R  +   L      
Subjt:  ----QGGEGF-VYSGDESPARSSLVMVRSGRGGGGGGGPVTSCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRSDGL------

Query:  -----NSKRPKDTHYHPTSS------------GLDMGNFPTEVTTPAVFRCVRMTSLDETDDQYAYQTAVNIGGHIFKGILYDHGPEQP--------PPP
             N+ + K     P++S            GL++G FP++V T AVF+C++M+S+++ +DQ AYQ AV+IGGH+FKGILYD G E             
Subjt:  -----NSKRPKDTHYHPTSS------------GLDMGNFPTEVTTPAVFRCVRMTSLDETDDQYAYQTAVNIGGHIFKGILYDHGPEQP--------PPP

Query:  PSSSSAA------------------------------LLDPTPPYPTPLSTYITAGTQFFLPPS
         S  SA                                LDP+  +P PLST++ AGTQFF PPS
Subjt:  PSSSSAA------------------------------LLDPTPPYPTPLSTYITAGTQFFLPPS

O65517 Protein SHI RELATED SEQUENCE 22.0e-3752.9Show/hide
Query:  SCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLR----------------SDGLNSKRPKDTHYHPT-------------SSGLD
        SC+DCGNQAKKDC HMRCRTCCKSRGF+C THV+STW+P ++RR+R  +                + G  S  PK  H  PT             S+GL+
Subjt:  SCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLR----------------SDGLNSKRPKDTHYHPT-------------SSGLD

Query:  MG--NFPTEVTTPAVFRCVRMTSLDE-TDDQYAYQTAVNIGGHIFKGILYDHGPE
        MG  +FP EV++ A+FRCV+M+ +D+  D QYAYQT VNIGGH+FKGILYD GPE
Subjt:  MG--NFPTEVTTPAVFRCVRMTSLDE-TDDQYAYQTAVNIGGHIFKGILYDHGPE

Q9LQZ5 Protein SHI RELATED SEQUENCE 52.8e-3941.31Show/hide
Query:  YKNYERLETW--------EGEEQQQQQQPAQEQG---GEGFVYSGDES-----PARSSLVMVRSGRGGGG-----GGGPVTSCQDCGNQAKKDCVHMRCR
        Y N +  E W        E ++QQQQQQ A         G V SG  S      +RS    V S    GG      GG   +CQDCGNQAKKDC HMRCR
Subjt:  YKNYERLETW--------EGEEQQQQQQPAQEQG---GEGFVYSGDES-----PARSSLVMVRSGRGGGG-----GGGPVTSCQDCGNQAKKDCVHMRCR

Query:  TCCKSRGFECETHVKSTWVPASKRRDRHLRSDGL-----------NSKRPK--------DTHYHP----------------TSSGLDMG-NFPTEVTTPA
        TCCKSRGF C+THVKSTWVPA+KRR+R  +   L           N+KR +        D   H                 ++SGL++  + P EV +PA
Subjt:  TCCKSRGFECETHVKSTWVPASKRRDRHLRSDGL-----------NSKRPK--------DTHYHP----------------TSSGLDMG-NFPTEVTTPA

Query:  VFRCVRMTSL--DETDDQYAYQTAVNIGGHIFKGILYDHGPEQ-----------------------PPPPPSSSSAALLDPTPPYPTPLSTYITAGTQFF
        +FRCVR++S+  DE D  YAYQTAVNIGGHIFKGILYD GPE                             ++++  +LDP+  YP  L+++I AGT FF
Subjt:  VFRCVRMTSL--DETDDQYAYQTAVNIGGHIFKGILYDHGPEQ-----------------------PPPPPSSSSAALLDPTPPYPTPLSTYITAGTQFF

Query:  LPPSS
         PP S
Subjt:  LPPSS

Q9SD40 Protein SHI RELATED SEQUENCE 14.4e-4837.53Show/hide
Query:  MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKN----------------------YERLETWEGEEQQQ---QQQPAQEQ-------GGE
        MAGFF LDGGG GG     +     +      P +E   WY+N                         LE W+   QQ+   Q Q  Q++        G 
Subjt:  MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKN----------------------YERLETWEGEEQQQ---QQQPAQEQ-------GGE

Query:  G--------FVYSGDESPA----RSSLVMVRSGRGGGGGGGPVTSCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSK
        G        F  SG+ S A     ++++M+RSG  GGG GG   SCQDCGNQAKKDC HMRCRTCCKSRGFEC THV+STWVPA+KRR+R  +   +  +
Subjt:  G--------FVYSGDESPA----RSSLVMVRSGRGGGGGGGPVTSCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSK

Query:  R--------PKDTHYH-------------PTSSGLDMGNFPTEVTTPAVFRCVRMTSLDETDDQYAYQTAVNIGGHIFKGILYDHGP-------------
                 PK    +             P+ SGL++GNFP EV++ AVFRCVR++S+++ ++++AYQTAV+IGGHIFKGILYD GP             
Subjt:  R--------PKDTHYH-------------PTSSGLDMGNFPTEVTTPAVFRCVRMTSLDETDDQYAYQTAVNIGGHIFKGILYDHGP-------------

Query:  --------------------------EQPPP------PPSSSSAALLDPTPPYPTPLSTYITAGTQFFLPPSS
                                      P        S+++A  +DP   YPTP++T++ AGTQFF  P S
Subjt:  --------------------------EQPPP------PPSSSSAALLDPTPPYPTPLSTYITAGTQFFLPPSS

Q9XGX0 Protein SHORT INTERNODES7.7e-4540.3Show/hide
Query:  MAGFFPLDGGGSGGRVPNYHFPT--PTTGGEIIHPTTEGLFWYKN-------------YE-RLETWEGEEQQQ---QQQPAQEQGGEGFVYSG--DESPA
        MAGFF L  GG G    N+   T  P++ G      TE   W +N             Y+  LE W+    Q+   QQQ  Q+Q  + +  +      P+
Subjt:  MAGFFPLDGGGSGGRVPNYHFPT--PTTGGEIIHPTTEGLFWYKN-------------YE-RLETWEGEEQQQ---QQQPAQEQGGEGFVYSG--DESPA

Query:  RSSLVMVRSG-----RGGGGGGGPVTSCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLR-SDG-----LNSKRPKDTHYH----
          SL+    G     R G G GGP  SCQDCGNQ+KKDC HMRCRTCCKSRG +C THVKSTWVPA+KRR+R  + S G     L    PK         
Subjt:  RSSLVMVRSG-----RGGGGGGGPVTSCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLR-SDG-----LNSKRPKDTHYH----

Query:  -----------PTSSGLDMGNFPTEVTTPAVFRCVRMTSLDETDDQYAYQTAVNIGGHIFKGILYDHGP---------EQP----PPPPSSSSAA-----
                     +SGL++GNFP EV++ AVFRCVR++S+D+ +++YAY+TAV+IGGH+FKG+LYD GP          QP       PS+SS++     
Subjt:  -----------PTSSGLDMGNFPTEVTTPAVFRCVRMTSLDETDDQYAYQTAVNIGGHIFKGILYDHGP---------EQP----PPPPSSSSAA-----

Query:  -----------LLDPTP-PYPTPLSTYITAGTQFF
                    +DP    YPTP++T++T GT FF
Subjt:  -----------LLDPTP-PYPTPLSTYITAGTQFF

Arabidopsis top hitse value%identityAlignment
AT1G75520.1 SHI-related sequence 52.0e-4041.31Show/hide
Query:  YKNYERLETW--------EGEEQQQQQQPAQEQG---GEGFVYSGDES-----PARSSLVMVRSGRGGGG-----GGGPVTSCQDCGNQAKKDCVHMRCR
        Y N +  E W        E ++QQQQQQ A         G V SG  S      +RS    V S    GG      GG   +CQDCGNQAKKDC HMRCR
Subjt:  YKNYERLETW--------EGEEQQQQQQPAQEQG---GEGFVYSGDES-----PARSSLVMVRSGRGGGG-----GGGPVTSCQDCGNQAKKDCVHMRCR

Query:  TCCKSRGFECETHVKSTWVPASKRRDRHLRSDGL-----------NSKRPK--------DTHYHP----------------TSSGLDMG-NFPTEVTTPA
        TCCKSRGF C+THVKSTWVPA+KRR+R  +   L           N+KR +        D   H                 ++SGL++  + P EV +PA
Subjt:  TCCKSRGFECETHVKSTWVPASKRRDRHLRSDGL-----------NSKRPK--------DTHYHP----------------TSSGLDMG-NFPTEVTTPA

Query:  VFRCVRMTSL--DETDDQYAYQTAVNIGGHIFKGILYDHGPEQ-----------------------PPPPPSSSSAALLDPTPPYPTPLSTYITAGTQFF
        +FRCVR++S+  DE D  YAYQTAVNIGGHIFKGILYD GPE                             ++++  +LDP+  YP  L+++I AGT FF
Subjt:  VFRCVRMTSL--DETDDQYAYQTAVNIGGHIFKGILYDHGPEQ-----------------------PPPPPSSSSAALLDPTPPYPTPLSTYITAGTQFF

Query:  LPPSS
         PP S
Subjt:  LPPSS

AT2G21400.1 SHI-related sequence32.1e-3756.67Show/hide
Query:  CQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDTHYHPTSSGLDMGNFPTEVTTPAVFRCVRMTSLDETDDQYA
        C+DCGNQAKKDCV+MRCRTCCKS+ F C+TH+KSTWVPA +R     +S  L++  PK    H T      G+FP E+++ A FRCV+++S+D+  +QYA
Subjt:  CQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDTHYHPTSSGLDMGNFPTEVTTPAVFRCVRMTSLDETDDQYA

Query:  YQTAVNIGGHIFKGILYDHG
        YQT VNIGGH+F+GIL+D G
Subjt:  YQTAVNIGGHIFKGILYDHG

AT3G51060.1 Lateral root primordium (LRP) protein-related3.1e-4937.53Show/hide
Query:  MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKN----------------------YERLETWEGEEQQQ---QQQPAQEQ-------GGE
        MAGFF LDGGG GG     +     +      P +E   WY+N                         LE W+   QQ+   Q Q  Q++        G 
Subjt:  MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKN----------------------YERLETWEGEEQQQ---QQQPAQEQ-------GGE

Query:  G--------FVYSGDESPA----RSSLVMVRSGRGGGGGGGPVTSCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSK
        G        F  SG+ S A     ++++M+RSG  GGG GG   SCQDCGNQAKKDC HMRCRTCCKSRGFEC THV+STWVPA+KRR+R  +   +  +
Subjt:  G--------FVYSGDESPA----RSSLVMVRSGRGGGGGGGPVTSCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSK

Query:  R--------PKDTHYH-------------PTSSGLDMGNFPTEVTTPAVFRCVRMTSLDETDDQYAYQTAVNIGGHIFKGILYDHGP-------------
                 PK    +             P+ SGL++GNFP EV++ AVFRCVR++S+++ ++++AYQTAV+IGGHIFKGILYD GP             
Subjt:  R--------PKDTHYH-------------PTSSGLDMGNFPTEVTTPAVFRCVRMTSLDETDDQYAYQTAVNIGGHIFKGILYDHGP-------------

Query:  --------------------------EQPPP------PPSSSSAALLDPTPPYPTPLSTYITAGTQFFLPPSS
                                      P        S+++A  +DP   YPTP++T++ AGTQFF  P S
Subjt:  --------------------------EQPPP------PPSSSSAALLDPTPPYPTPLSTYITAGTQFFLPPSS

AT4G36260.1 Lateral root primordium (LRP) protein-related1.4e-3852.9Show/hide
Query:  SCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLR----------------SDGLNSKRPKDTHYHPT-------------SSGLD
        SC+DCGNQAKKDC HMRCRTCCKSRGF+C THV+STW+P ++RR+R  +                + G  S  PK  H  PT             S+GL+
Subjt:  SCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLR----------------SDGLNSKRPKDTHYHPT-------------SSGLD

Query:  MG--NFPTEVTTPAVFRCVRMTSLDE-TDDQYAYQTAVNIGGHIFKGILYDHGPE
        MG  +FP EV++ A+FRCV+M+ +D+  D QYAYQT VNIGGH+FKGILYD GPE
Subjt:  MG--NFPTEVTTPAVFRCVRMTSLDE-TDDQYAYQTAVNIGGHIFKGILYDHGPE

AT5G66350.1 Lateral root primordium (LRP) protein-related5.5e-4640.3Show/hide
Query:  MAGFFPLDGGGSGGRVPNYHFPT--PTTGGEIIHPTTEGLFWYKN-------------YE-RLETWEGEEQQQ---QQQPAQEQGGEGFVYSG--DESPA
        MAGFF L  GG G    N+   T  P++ G      TE   W +N             Y+  LE W+    Q+   QQQ  Q+Q  + +  +      P+
Subjt:  MAGFFPLDGGGSGGRVPNYHFPT--PTTGGEIIHPTTEGLFWYKN-------------YE-RLETWEGEEQQQ---QQQPAQEQGGEGFVYSG--DESPA

Query:  RSSLVMVRSG-----RGGGGGGGPVTSCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLR-SDG-----LNSKRPKDTHYH----
          SL+    G     R G G GGP  SCQDCGNQ+KKDC HMRCRTCCKSRG +C THVKSTWVPA+KRR+R  + S G     L    PK         
Subjt:  RSSLVMVRSG-----RGGGGGGGPVTSCQDCGNQAKKDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLR-SDG-----LNSKRPKDTHYH----

Query:  -----------PTSSGLDMGNFPTEVTTPAVFRCVRMTSLDETDDQYAYQTAVNIGGHIFKGILYDHGP---------EQP----PPPPSSSSAA-----
                     +SGL++GNFP EV++ AVFRCVR++S+D+ +++YAY+TAV+IGGH+FKG+LYD GP          QP       PS+SS++     
Subjt:  -----------PTSSGLDMGNFPTEVTTPAVFRCVRMTSLDETDDQYAYQTAVNIGGHIFKGILYDHGP---------EQP----PPPPSSSSAA-----

Query:  -----------LLDPTP-PYPTPLSTYITAGTQFF
                    +DP    YPTP++T++T GT FF
Subjt:  -----------LLDPTP-PYPTPLSTYITAGTQFF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGGTTTTTTCCCACTAGACGGCGGCGGAAGCGGCGGAAGAGTACCCAATTATCATTTTCCCACTCCAACCACCGGCGGCGAAATTATTCATCCAACAACCGAGGG
GTTATTTTGGTACAAGAATTATGAGAGATTGGAAACATGGGAAGGAGAAGAACAGCAACAGCAGCAGCAACCGGCGCAAGAACAAGGGGGAGAAGGGTTTGTTTACTCCG
GCGATGAATCGCCGGCAAGATCGTCGTTGGTGATGGTGAGATCGGGGAGAGGCGGGGGCGGTGGAGGAGGGCCGGTAACGAGTTGCCAAGACTGTGGAAATCAAGCCAAA
AAAGATTGTGTTCACATGCGATGTAGAACTTGTTGTAAAAGCCGTGGGTTTGAGTGTGAAACCCACGTGAAAAGCACGTGGGTTCCTGCCTCTAAACGCCGTGACCGCCA
CCTCCGTTCCGACGGCCTTAACTCCAAACGCCCTAAAGACACCCACTACCACCCCACTTCTTCAGGGTTGGACATGGGGAATTTTCCGACGGAAGTGACCACACCGGCAG
TGTTTCGGTGTGTACGAATGACAAGCTTGGACGAAACCGACGACCAATATGCGTATCAAACAGCTGTCAATATCGGAGGCCATATTTTTAAAGGCATTCTTTACGATCAC
GGCCCTGAACAACCACCTCCCCCTCCCTCCTCCTCCTCCGCCGCATTGCTCGATCCAACTCCGCCCTACCCGACTCCTCTCTCCACCTATATCACCGCCGGTACGCAATT
TTTTCTTCCTCCATCATCTTAG
mRNA sequenceShow/hide mRNA sequence
AAAACAAAAGAGAGAGAGAGAGAGAGATAGAGAAAGAGAGAAAAAAAAAAAGGTAATCAATCATCTCTGCAAAACTGCAACAAAATCAGAGCATAGAGAAAGGGAAAGAC
CTCAGAGAAAGACAGAGAAGAACAACCACAACAACAAAGAAGAAAGAAGTTAATTTATTTTGTTCTCTATTTAAGTTAGCACCGCCGTTTCCCATGGCGGCGTTGCAGAC
GACTTCACTTTTGCATAACAAATAAAAATAAAAAAATAAAAAAAAAATTACCCTCTCCGAATCTGATTCCCAATTCTTCAACCCTTTTTTTCTCAAAACTACTTTCCGAT
CATCGTTCAGAGATTGTGTTGTTTTTTTTTTCTGATATGGATTTTGATTCAAAATCAGGAAGAATATGGCCGGTTTTTTCCCACTAGACGGCGGCGGAAGCGGCGGAAGA
GTACCCAATTATCATTTTCCCACTCCAACCACCGGCGGCGAAATTATTCATCCAACAACCGAGGGGTTATTTTGGTACAAGAATTATGAGAGATTGGAAACATGGGAAGG
AGAAGAACAGCAACAGCAGCAGCAACCGGCGCAAGAACAAGGGGGAGAAGGGTTTGTTTACTCCGGCGATGAATCGCCGGCAAGATCGTCGTTGGTGATGGTGAGATCGG
GGAGAGGCGGGGGCGGTGGAGGAGGGCCGGTAACGAGTTGCCAAGACTGTGGAAATCAAGCCAAAAAAGATTGTGTTCACATGCGATGTAGAACTTGTTGTAAAAGCCGT
GGGTTTGAGTGTGAAACCCACGTGAAAAGCACGTGGGTTCCTGCCTCTAAACGCCGTGACCGCCACCTCCGTTCCGACGGCCTTAACTCCAAACGCCCTAAAGACACCCA
CTACCACCCCACTTCTTCAGGGTTGGACATGGGGAATTTTCCGACGGAAGTGACCACACCGGCAGTGTTTCGGTGTGTACGAATGACAAGCTTGGACGAAACCGACGACC
AATATGCGTATCAAACAGCTGTCAATATCGGAGGCCATATTTTTAAAGGCATTCTTTACGATCACGGCCCTGAACAACCACCTCCCCCTCCCTCCTCCTCCTCCGCCGCA
TTGCTCGATCCAACTCCGCCCTACCCGACTCCTCTCTCCACCTATATCACCGCCGGTACGCAATTTTTTCTTCCTCCATCATCTTAG
Protein sequenceShow/hide protein sequence
MAGFFPLDGGGSGGRVPNYHFPTPTTGGEIIHPTTEGLFWYKNYERLETWEGEEQQQQQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGGGGGPVTSCQDCGNQAK
KDCVHMRCRTCCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDTHYHPTSSGLDMGNFPTEVTTPAVFRCVRMTSLDETDDQYAYQTAVNIGGHIFKGILYDH
GPEQPPPPPSSSSAALLDPTPPYPTPLSTYITAGTQFFLPPSS