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CSPI04G05320 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G05320
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionDehydrin DHN1
Genome locationChr4:3630643..3631105
RNA-Seq ExpressionCSPI04G05320
SyntenyCSPI04G05320
Gene Ontology termsGO:0009414 - response to water deprivation (biological process)
GO:0009631 - cold acclimation (biological process)
GO:0009737 - response to abscisic acid (biological process)
GO:0005829 - cytosol (cellular component)
InterPro domainsIPR000167 - Dehydrin
IPR030513 - Dehydrin, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044784.1 dehydrin DHN1 [Cucumis melo var. makuwa]7.7e-4389Show/hide
Query:  MAHYQNQYSAQAGSDEYGYPIRQTDEYSNVISETGQSVDTLRRTDDQYPKPIHGSEQQQPSGIFHNEKVVMTKTREDGSGHHEKKGVIEKIKEKLPGGHH
        MAHYQNQYSAQAGSD YGYPIRQTDEY NVISETGQ VDTLRRTD+QYPKP H SEQQQP GI HNEKVV+TKT EDGSGHHEKKG+IEKIKEKLPGGHH
Subjt:  MAHYQNQYSAQAGSDEYGYPIRQTDEYSNVISETGQSVDTLRRTDDQYPKPIHGSEQQQPSGIFHNEKVVMTKTREDGSGHHEKKGVIEKIKEKLPGGHH

KAE8649181.1 hypothetical protein Csa_015017 [Cucumis sativus]5.5e-4999Show/hide
Query:  MAHYQNQYSAQAGSDEYGYPIRQTDEYSNVISETGQSVDTLRRTDDQYPKPIHGSEQQQPSGIFHNEKVVMTKTREDGSGHHEKKGVIEKIKEKLPGGHH
        MAHYQNQYSAQAGSDEYGYPIRQTDEYSNVISETGQ VDTLRRTDDQYPKPIHGSEQQQPSGIFHNEKVVMTKTREDGSGHHEKKGVIEKIKEKLPGGHH
Subjt:  MAHYQNQYSAQAGSDEYGYPIRQTDEYSNVISETGQSVDTLRRTDDQYPKPIHGSEQQQPSGIFHNEKVVMTKTREDGSGHHEKKGVIEKIKEKLPGGHH

KAG7015320.1 hypothetical protein SDJN02_22955, partial [Cucurbita argyrosperma subsp. argyrosperma]4.4e-2252.67Show/hide
Query:  MAHYQNQYSAQAGSDEYGYPIRQTDEYSNVISETGQSVDTLRRTD-----DQYPKPIH---------------------GSEQQQPSGIFHNEKVVMT--
        MAHYQNQYSAQ+G+D+YG PIRQTDEY NVIS+T Q  D LRRTD     DQY  PIH                     G +QQQ  G+FH++K V T  
Subjt:  MAHYQNQYSAQAGSDEYGYPIRQTDEYSNVISETGQSVDTLRRTD-----DQYPKPIH---------------------GSEQQQPSGIFHNEKVVMT--

Query:  ----KTREDGSGHHEKKGVIEKIKEKLPGGH
             T E G   HEKKG++EKIKEKLPGG+
Subjt:  ----KTREDGSGHHEKKGVIEKIKEKLPGGH

XP_011653150.2 dehydrin Rab18 [Cucumis sativus]3.6e-4898.99Show/hide
Query:  MAHYQNQYSAQAGSDEYGYPIRQTDEYSNVISETGQSVDTLRRTDDQYPKPIHGSEQQQPSGIFHNEKVVMTKTREDGSGHHEKKGVIEKIKEKLPGGH
        MAHYQNQYSAQAGSDEYGYPIRQTDEYSNVISETGQ VDTLRRTDDQYPKPIHGSEQQQPSGIFHNEKVVMTKTREDGSGHHEKKGVIEKIKEKLPGGH
Subjt:  MAHYQNQYSAQAGSDEYGYPIRQTDEYSNVISETGQSVDTLRRTDDQYPKPIHGSEQQQPSGIFHNEKVVMTKTREDGSGHHEKKGVIEKIKEKLPGGH

XP_038888416.1 dehydrin Xero 1-like [Benincasa hispida]1.5e-3066.67Show/hide
Query:  MAHYQNQYSAQAGSDEYGYPIRQTDEYSNVISETGQSVDTLRRTD-----DQYPKPIHGSEQQQPSGIFHNEKVVMTKTREDGSGHHEKKGVIEKIKEKL
        MAHYQNQYSA++G+D+YGYPIRQTDEY NVISE+GQ  DT  RTD     DQY  PI  S++QQ  GIFH++K V T   E G  HHEKKG++EKIKEKL
Subjt:  MAHYQNQYSAQAGSDEYGYPIRQTDEYSNVISETGQSVDTLRRTD-----DQYPKPIHGSEQQQPSGIFHNEKVVMTKTREDGSGHHEKKGVIEKIKEKL

Query:  PGGHH
        PGGHH
Subjt:  PGGHH

TrEMBL top hitse value%identityAlignment
A0A0A0KUH6 Uncharacterized protein2.7e-4999Show/hide
Query:  MAHYQNQYSAQAGSDEYGYPIRQTDEYSNVISETGQSVDTLRRTDDQYPKPIHGSEQQQPSGIFHNEKVVMTKTREDGSGHHEKKGVIEKIKEKLPGGHH
        MAHYQNQYSAQAGSDEYGYPIRQTDEYSNVISETGQ VDTLRRTDDQYPKPIHGSEQQQPSGIFHNEKVVMTKTREDGSGHHEKKGVIEKIKEKLPGGHH
Subjt:  MAHYQNQYSAQAGSDEYGYPIRQTDEYSNVISETGQSVDTLRRTDDQYPKPIHGSEQQQPSGIFHNEKVVMTKTREDGSGHHEKKGVIEKIKEKLPGGHH

A0A5D3CXL0 Dehydrin DHN13.7e-4389Show/hide
Query:  MAHYQNQYSAQAGSDEYGYPIRQTDEYSNVISETGQSVDTLRRTDDQYPKPIHGSEQQQPSGIFHNEKVVMTKTREDGSGHHEKKGVIEKIKEKLPGGHH
        MAHYQNQYSAQAGSD YGYPIRQTDEY NVISETGQ VDTLRRTD+QYPKP H SEQQQP GI HNEKVV+TKT EDGSGHHEKKG+IEKIKEKLPGGHH
Subjt:  MAHYQNQYSAQAGSDEYGYPIRQTDEYSNVISETGQSVDTLRRTDDQYPKPIHGSEQQQPSGIFHNEKVVMTKTREDGSGHHEKKGVIEKIKEKLPGGHH

A0A6J1C526 dehydrin DHN1-like6.7e-1648.76Show/hide
Query:  MAHYQNQYSAQAGSDEYGYPIRQTDEYSNVISETGQSVDTLRRTD---DQYPKPI----------HGSEQQ-----QPSGIFHNEK---VVMTKTREDGS
        MAHYQN Y  Q+G+DEYG PIRQTDEY NVI E+GQ VD LRRT    D  P  +           G  QQ     Q  G+FH++         T  +  
Subjt:  MAHYQNQYSAQAGSDEYGYPIRQTDEYSNVISETGQSVDTLRRTD---DQYPKPI----------HGSEQQ-----QPSGIFHNEK---VVMTKTREDGS

Query:  GHHEKKGVIEKIKEKLPGGHH
        G  EKKG++EKIKEKLPG HH
Subjt:  GHHEKKGVIEKIKEKLPGGHH

A0A6J1C5G3 dehydrin Xero 1-like6.9e-1339.71Show/hide
Query:  MAHYQNQYSAQAGSDEYGYPIRQTDEYSNVISET--GQSVDTLRRTD-----DQYPKPI------------------------------HGSEQQQPSGI
        MAHYQNQY AQ+G+D+YG PIR+TDEY NVIS+T  GQ  D L RTD     DQY  P+                              H   ++    +
Subjt:  MAHYQNQYSAQAGSDEYGYPIRQTDEYSNVISET--GQSVDTLRRTD-----DQYPKPI------------------------------HGSEQQQPSGI

Query:  FHNEKVVMTKTREDGSGHHEKKGVIEKIKEKLPGGH
          +     + + +DG G   KKG+ EKIKEKLPG H
Subjt:  FHNEKVVMTKTREDGSGHHEKKGVIEKIKEKLPGGH

A0A6J1EUD8 dehydrin DHN1-like3.1e-2151.13Show/hide
Query:  MAHYQNQYSAQAGSDEYGYPIRQTDEYSNVISETGQSVDTLRRTD-----DQYPKPIHGS-----------------------EQQQPSGIFHNEKVVMT
        MAHYQNQYSAQ+G+D+YG PIRQTDEY NVIS+T Q  D LRRTD     DQY  PIH +                       +QQQ  G+FH++K V T
Subjt:  MAHYQNQYSAQAGSDEYGYPIRQTDEYSNVISETGQSVDTLRRTD-----DQYPKPIHGS-----------------------EQQQPSGIFHNEKVVMT

Query:  ------KTREDGSGHHEKKGVIEKIKEKLPGGH
               T E G   HEKKG++EKIKEKLPGG+
Subjt:  ------KTREDGSGHHEKKGVIEKIKEKLPGGH

SwissProt top hitse value%identityAlignment
A8CVF3 Dehydrin DHN19.6e-0430.67Show/hide
Query:  MAHYQNQYSAQAGSDEYGYPIRQTDEY----------------SNVISETGQSVDTL---RRTDDQYPKP----IHGSEQQQPSGI-----FHNEKVV--
        MA Y +QY  Q  +DEYG PIRQT E+                + V   T Q V T+    +  DQY  P     +G++Q   +G       H   +   
Subjt:  MAHYQNQYSAQAGSDEYGYPIRQTDEY----------------SNVISETGQSVDTL---RRTDDQYPKP----IHGSEQQQPSGI-----FHNEKVV--

Query:  --------------------MTKTREDGSGHHEKKGVIEKIKEKLPGGHH
                             + + +DG G   KKG+ EKIKEKLPGG H
Subjt:  --------------------MTKTREDGSGHHEKKGVIEKIKEKLPGGHH

P09442 Late embryogenesis abundant protein D-112.3e-0535.64Show/hide
Query:  MAHYQNQYSAQ--AGSDEYGYPIRQTDEYSNVI--SETGQSVDTLRRTDDQYPKPIHGSEQQQPSGIFHNEKVVMTKTREDGSGHHEKKGVIEKIKEKLP
        MAH+QNQYSA     +D YG P R+TDEY N I   ETG+ +  +          +H +     S          + + ++G+G  +KKG+ E++KEK+P
Subjt:  MAHYQNQYSAQ--AGSDEYGYPIRQTDEYSNVI--SETGQSVDTLRRTDDQYPKPIHGSEQQQPSGIFHNEKVVMTKTREDGSGHHEKKGVIEKIKEKLP

Query:  G
        G
Subjt:  G

P25863 Dehydrin Xero 12.5e-0468.97Show/hide
Query:  TKTREDGSGHHEKKGVIEKIKEKLPGGHH
        T   + G+ HHEKKG++EKIKEKLPGGHH
Subjt:  TKTREDGSGHHEKKGVIEKIKEKLPGGHH

P28639 Dehydrin DHN12.3e-0533.83Show/hide
Query:  MAHYQNQYSAQAG-SDEYGYPIRQTDEYSNVISETGQSVDTLRR---TDDQYPKPIHGSEQQQPS-----------------------GIFHNEKVVMTK
        M+ YQNQY AQ G +DEYG P+ Q D+Y N IS  G + +  R+   T        HG  QQ                          G  +      T 
Subjt:  MAHYQNQYSAQAG-SDEYGYPIRQTDEYSNVISETGQSVDTLRR---TDDQYPKPIHGSEQQQPS-----------------------GIFHNEKVVMTK

Query:  TREDGSG---------HHEKKGVIEKIKEKLPG
        T   GSG         H +KKGV++KIKEK+PG
Subjt:  TREDGSG---------HHEKKGVIEKIKEKLPG

P28640 Dehydrin DHN21.9e-0432.58Show/hide
Query:  MAHYQNQYSAQA-GSDEYGYPIRQTDEYSNVISETGQSVDTLRR---------TDDQYPKPIHGSEQ----------------QQPSGIFHNEKVVMTKT
        M+ YQNQY AQ   +DEYG P+ Q D+Y N IS  G       R         TD  + +   G +Q                +   G  +      T T
Subjt:  MAHYQNQYSAQA-GSDEYGYPIRQTDEYSNVISETGQSVDTLRR---------TDDQYPKPIHGSEQ----------------QQPSGIFHNEKVVMTKT

Query:  REDGSG---------HHEKKGVIEKIKEKLPG
           GSG         H +KKGV++KIKEK+PG
Subjt:  REDGSG---------HHEKKGVIEKIKEKLPG

Arabidopsis top hitse value%identityAlignment
AT3G50980.1 dehydrin xero 11.8e-0568.97Show/hide
Query:  TKTREDGSGHHEKKGVIEKIKEKLPGGHH
        T   + G+ HHEKKG++EKIKEKLPGGHH
Subjt:  TKTREDGSGHHEKKGVIEKIKEKLPGGHH

AT5G66400.2 Dehydrin family protein9.9e-0430.28Show/hide
Query:  MAHYQNQYSAQAGSDEYGYPIRQT-DEYSNVI---------------------------------SETGQSVDTLRRTD---DQYPKPIHGSEQQQP---
        MA YQN+   QA +DEYG PI+Q  DEY N +                                    GQ   T   T+          HG EQ      
Subjt:  MAHYQNQYSAQAGSDEYGYPIRQT-DEYSNVI---------------------------------SETGQSVDTLRRTD---DQYPKPIHGSEQQQP---

Query:  ---SGIFHNEKVVMTKTREDGSGHHEKKGVIEKIKEKLPGGH
            G+ H      + + +DG G   KKG+ +KIKEKLPG H
Subjt:  ---SGIFHNEKVVMTKTREDGSGHHEKKGVIEKIKEKLPGGH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACATTACCAAAACCAATACAGCGCACAAGCTGGAAGCGATGAATACGGCTATCCAATTCGCCAGACCGATGAATACAGCAACGTTATCTCCGAAACCGGTCAGTC
TGTCGATACCCTCCGCCGGACCGATGACCAGTACCCCAAGCCGATTCATGGAAGCGAGCAGCAGCAGCCGAGTGGAATATTTCATAATGAAAAAGTGGTGATGACGAAGA
CGAGAGAGGATGGGAGTGGACATCATGAGAAGAAGGGGGTAATAGAGAAGATTAAGGAGAAGCTGCCGGGAGGACACCATTGA
mRNA sequenceShow/hide mRNA sequence
AAGAAAAAGAAAAAAAAAGGAAAAATGGCACATTACCAAAACCAATACAGCGCACAAGCTGGAAGCGATGAATACGGCTATCCAATTCGCCAGACCGATGAATACAGCAA
CGTTATCTCCGAAACCGGTCAGTCTGTCGATACCCTCCGCCGGACCGATGACCAGTACCCCAAGCCGATTCATGGAAGCGAGCAGCAGCAGCCGAGTGGAATATTTCATA
ATGAAAAAGTGGTGATGACGAAGACGAGAGAGGATGGGAGTGGACATCATGAGAAGAAGGGGGTAATAGAGAAGATTAAGGAGAAGCTGCCGGGAGGACACCATTGAAAA
GGCTAAAGGCTGTGTGTGTGTGTGTTTTAATTTCTGTAACTCAACTTAAGTTTTTTGAAGTGTTTGTAGAGAAAGAACAATGAACGAAGGGACATGTTTATGTGTGACTA
AATAATAATAGTGAAGTGAGGAC
Protein sequenceShow/hide protein sequence
MAHYQNQYSAQAGSDEYGYPIRQTDEYSNVISETGQSVDTLRRTDDQYPKPIHGSEQQQPSGIFHNEKVVMTKTREDGSGHHEKKGVIEKIKEKLPGGHH