CuGenDBv2

Gene ID	CSPI04G05460
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	late embryogenesis abundant protein D-29-like
Genome location	Chr4:3719984..3721028
RNA-Seq Expression	CSPI04G05460
Synteny	CSPI04G05460
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004146555.1 late embryogenesis abundant protein D-29 [Cucumis sativus]

3.0e-76

100

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Query:  MGRKTRTLVVAVVWLVLVAEKCSGFGEEAVKDVKNNMSEIAEGANLDEKAEAVKSKASEVYTEAKDKTESWSNWAYNKISRGLGLNEEEIKETAHNVADK
        MGRKTRTLVVAVVWLVLVAEKCSGFGEEAVKDVKNNMSEIAEGANLDEKAEAVKSKASEVYTEAKDKTESWSNWAYNKISRGLGLNEEEIKETAHNVADK
Subjt:  MGRKTRTLVVAVVWLVLVAEKCSGFGEEAVKDVKNNMSEIAEGANLDEKAEAVKSKASEVYTEAKDKTESWSNWAYNKISRGLGLNEEEIKETAHNVADK

Query:  AGDAAIKTTEKINTAASDASNYASEKAGEAAKAASEAASKLKSKSEGVVGPAAEKVKETLVSG
        AGDAAIKTTEKINTAASDASNYASEKAGEAAKAASEAASKLKSKSEGVVGPAAEKVKETLVSG
Subjt:  AGDAAIKTTEKINTAASDASNYASEKAGEAAKAASEAASKLKSKSEGVVGPAAEKVKETLVSG

XP_008452082.1 PREDICTED: late embryogenesis abundant protein D-29-like [Cucumis melo]

8.6e-31

76.24

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Query:  MGRKTRTLVVAVVWLVLVAEKCSGFGEEAVKDVKNNMSEIAEGANLDEKAEAVKSKASEVYTEAKDKTESWSNWAYNKISRGLGLNEEEIKETAHNVADK
        MGRK  TLVVAVV LVLVAEKC G GE+AV+DVK++MSE A+ A LDEKAEAVKS ASEVY++AKDK ESWSNWAY+KIS+GLGL+EEE KE AH+ ADK
Subjt:  MGRKTRTLVVAVVWLVLVAEKCSGFGEEAVKDVKNNMSEIAEGANLDEKAEAVKSKASEVYTEAKDKTESWSNWAYNKISRGLGLNEEEIKETAHNVADK

Query:  A
        A
Subjt:  A

XP_008452083.1 PREDICTED: late embryogenesis abundant protein D-29-like [Cucumis melo]

1.2e-61

85.89

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Query:  MGRKTRTLVVAVVWLVLVAEKCSGFGEEAVKDVKNNMSEIAEGANLDEKAEAVKSKASEVYTEAKDKTESWSNWAYNKISRGLGLNEEEIKETAHNVADK
        MGRKT TLVVAVVWLVLVAEKCSG+G EAV+DVK+N+SEIAE A LDEKAEAVKS ASEVY++AKDK ESWSNWAY+KIS+GLGL+E+E+KETAHNVADK
Subjt:  MGRKTRTLVVAVVWLVLVAEKCSGFGEEAVKDVKNNMSEIAEGANLDEKAEAVKSKASEVYTEAKDKTESWSNWAYNKISRGLGLNEEEIKETAHNVADK

Query:  AGDAAIKTTEKINTAASDASNYASEKAGEAAKAASEAASKLKSKSEGVVGPAAEKVKETLVSG
        AGDAAIKTTEKINTAAS ASNYASEKAGEAAKAASEAAS LKSKS  VVG A EKVKETLVSG
Subjt:  AGDAAIKTTEKINTAASDASNYASEKAGEAAKAASEAASKLKSKSEGVVGPAAEKVKETLVSG

XP_038906272.1 late embryogenesis abundant protein D-29 isoform X1 [Benincasa hispida]

3.8e-47

67.05

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Query:  MGRKTRTLVVAVVWLVLVAEKCSGFGEEAVKDVKNNMSEIAEGANLDEKAEAVKSKASEVYTEAKDKTESWSNWAYNKISRGLGLNEEEIKETAHNVADK
        MGR +   VVAVVWL+LVA+KC G GEEA++DVK+N+SEI +  +LDEKAEAVKS AS+V+ +AK+  ESWSNWAY KIS+GLG N EE+KETAH V DK
Subjt:  MGRKTRTLVVAVVWLVLVAEKCSGFGEEAVKDVKNNMSEIAEGANLDEKAEAVKSKASEVYTEAKDKTESWSNWAYNKISRGLGLNEEEIKETAHNVADK

Query:  AGDAAIKTTEKINTAA---SDASNYASEKAGEAAKAASEAASKLKSKSEGVVGPAAE-------KVKETLVSG
        AGDAA KTTEK++TAA   SDASNYASEKAGEA KAAS+AA  LKSKS  V+G A E       K KETLV G
Subjt:  AGDAAIKTTEKINTAA---SDASNYASEKAGEAAKAASEAASKLKSKSEGVVGPAAE-------KVKETLVSG

XP_038906279.1 late embryogenesis abundant protein D-29 isoform X2 [Benincasa hispida]

9.1e-49

68.24

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Query:  MGRKTRTLVVAVVWLVLVAEKCSGFGEEAVKDVKNNMSEIAEGANLDEKAEAVKSKASEVYTEAKDKTESWSNWAYNKISRGLGLNEEEIKETAHNVADK
        MGR +   VVAVVWL+LVA+KC G GEEA++DVK+N+SEI +  +LDEKAEAVKS AS+V+ +AK+  ESWSNWAY KIS+GLG N EE+KETAH V DK
Subjt:  MGRKTRTLVVAVVWLVLVAEKCSGFGEEAVKDVKNNMSEIAEGANLDEKAEAVKSKASEVYTEAKDKTESWSNWAYNKISRGLGLNEEEIKETAHNVADK

Query:  AGDAAIKTTEKINTAASDASNYASEKAGEAAKAASEAASKLKSKSEGVVGPAAE-------KVKETLVSG
        AGDAA KTTEK++TAASDASNYASEKAGEA KAAS+AA  LKSKS  V+G A E       K KETLV G
Subjt:  AGDAAIKTTEKINTAASDASNYASEKAGEAAKAASEAASKLKSKSEGVVGPAAE-------KVKETLVSG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KUJ5 Uncharacterized protein

1.5e-76

100

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Query:  MGRKTRTLVVAVVWLVLVAEKCSGFGEEAVKDVKNNMSEIAEGANLDEKAEAVKSKASEVYTEAKDKTESWSNWAYNKISRGLGLNEEEIKETAHNVADK
        MGRKTRTLVVAVVWLVLVAEKCSGFGEEAVKDVKNNMSEIAEGANLDEKAEAVKSKASEVYTEAKDKTESWSNWAYNKISRGLGLNEEEIKETAHNVADK
Subjt:  MGRKTRTLVVAVVWLVLVAEKCSGFGEEAVKDVKNNMSEIAEGANLDEKAEAVKSKASEVYTEAKDKTESWSNWAYNKISRGLGLNEEEIKETAHNVADK

Query:  AGDAAIKTTEKINTAASDASNYASEKAGEAAKAASEAASKLKSKSEGVVGPAAEKVKETLVSG
        AGDAAIKTTEKINTAASDASNYASEKAGEAAKAASEAASKLKSKSEGVVGPAAEKVKETLVSG
Subjt:  AGDAAIKTTEKINTAASDASNYASEKAGEAAKAASEAASKLKSKSEGVVGPAAEKVKETLVSG

A0A1S3BSF4 late embryogenesis abundant protein D-29-like

4.1e-31

76.24

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Query:  MGRKTRTLVVAVVWLVLVAEKCSGFGEEAVKDVKNNMSEIAEGANLDEKAEAVKSKASEVYTEAKDKTESWSNWAYNKISRGLGLNEEEIKETAHNVADK
        MGRK  TLVVAVV LVLVAEKC G GE+AV+DVK++MSE A+ A LDEKAEAVKS ASEVY++AKDK ESWSNWAY+KIS+GLGL+EEE KE AH+ ADK
Subjt:  MGRKTRTLVVAVVWLVLVAEKCSGFGEEAVKDVKNNMSEIAEGANLDEKAEAVKSKASEVYTEAKDKTESWSNWAYNKISRGLGLNEEEIKETAHNVADK

Query:  A
        A
Subjt:  A

A0A1S3BT31 late embryogenesis abundant protein D-29-like

5.9e-62

85.89

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Query:  MGRKTRTLVVAVVWLVLVAEKCSGFGEEAVKDVKNNMSEIAEGANLDEKAEAVKSKASEVYTEAKDKTESWSNWAYNKISRGLGLNEEEIKETAHNVADK
        MGRKT TLVVAVVWLVLVAEKCSG+G EAV+DVK+N+SEIAE A LDEKAEAVKS ASEVY++AKDK ESWSNWAY+KIS+GLGL+E+E+KETAHNVADK
Subjt:  MGRKTRTLVVAVVWLVLVAEKCSGFGEEAVKDVKNNMSEIAEGANLDEKAEAVKSKASEVYTEAKDKTESWSNWAYNKISRGLGLNEEEIKETAHNVADK

Query:  AGDAAIKTTEKINTAASDASNYASEKAGEAAKAASEAASKLKSKSEGVVGPAAEKVKETLVSG
        AGDAAIKTTEKINTAAS ASNYASEKAGEAAKAASEAAS LKSKS  VVG A EKVKETLVSG
Subjt:  AGDAAIKTTEKINTAASDASNYASEKAGEAAKAASEAASKLKSKSEGVVGPAAEKVKETLVSG

A0A5A7TSE6 Late embryogenesis abundant protein D-29-like

5.9e-62

85.89

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Query:  MGRKTRTLVVAVVWLVLVAEKCSGFGEEAVKDVKNNMSEIAEGANLDEKAEAVKSKASEVYTEAKDKTESWSNWAYNKISRGLGLNEEEIKETAHNVADK
        MGRKT TLVVAVVWLVLVAEKCSG+G EAV+DVK+N+SEIAE A LDEKAEAVKS ASEVY++AKDK ESWSNWAY+KIS+GLGL+E+E+KETAHNVADK
Subjt:  MGRKTRTLVVAVVWLVLVAEKCSGFGEEAVKDVKNNMSEIAEGANLDEKAEAVKSKASEVYTEAKDKTESWSNWAYNKISRGLGLNEEEIKETAHNVADK

Query:  AGDAAIKTTEKINTAASDASNYASEKAGEAAKAASEAASKLKSKSEGVVGPAAEKVKETLVSG
        AGDAAIKTTEKINTAAS ASNYASEKAGEAAKAASEAAS LKSKS  VVG A EKVKETLVSG
Subjt:  AGDAAIKTTEKINTAASDASNYASEKAGEAAKAASEAASKLKSKSEGVVGPAAEKVKETLVSG

A0A5D3D1U2 Late embryogenesis abundant protein D-29-like

4.1e-31

76.24

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Query:  MGRKTRTLVVAVVWLVLVAEKCSGFGEEAVKDVKNNMSEIAEGANLDEKAEAVKSKASEVYTEAKDKTESWSNWAYNKISRGLGLNEEEIKETAHNVADK
        MGRK  TLVVAVV LVLVAEKC G GE+AV+DVK++MSE A+ A LDEKAEAVKS ASEVY++AKDK ESWSNWAY+KIS+GLGL+EEE KE AH+ ADK
Subjt:  MGRKTRTLVVAVVWLVLVAEKCSGFGEEAVKDVKNNMSEIAEGANLDEKAEAVKSKASEVYTEAKDKTESWSNWAYNKISRGLGLNEEEIKETAHNVADK

Query:  A
        A
Subjt:  A

SwissProt top hits

e value

%identity

Alignment

P13940 Late embryogenesis abundant protein D-29

4.4e-06

32.12

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Query:  EEAVKDVKNNMSEIAEGANLDEKAEAVKSKASEVYTEAKDKTESWSNWAYNKISRGLGL-NEEEIKETAHNVADKAGDAAIKTTEKINTAASDASNYASE
        ++A  ++K+     A    +    +  K +ASEV  EAK+ TESW+ WA  KIS GLG   +++ K +     D   D A KT +K+   AS A  Y++ 
Subjt:  EEAVKDVKNNMSEIAEGANLDEKAEAVKSKASEVYTEAKDKTESWSNWAYNKISRGLGL-NEEEIKETAHNVADKAGDAAIKTTEKINTAASDASNYASE

Query:  KAGE----AAKAASEAASKLKSKSEGVVGPAAEKVKE
        KA +    A K   +  +  K KS  +     EK +E
Subjt:  KAGE----AAKAASEAASKLKSKSEGVVGPAAEKVKE

Arabidopsis top hits

e value

%identity

Alignment

AT4G36600.1 Late embryogenesis abundant (LEA) protein

2.6e-09

34.97

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Query:  TLVVAVVWLVLVAEKCSGFGEEAVKDVKNNMSEIAEGANLDEKAEAVKSKASEVYTEAKDKTESWSNWAYNKISRGLG---LNEEEIKETAHNVA-----
        T VV + W     ++C G+G E  +D+  N +E A+ A     AE  K  AS+   + KDKT SW+ W  +KIS GLG      EE  E+A N A     
Subjt:  TLVVAVVWLVLVAEKCSGFGEEAVKDVKNNMSEIAEGANLDEKAEAVKSKASEVYTEAKDKTESWSNWAYNKISRGLG---LNEEEIKETAHNVA-----

Query:  ---DKAGDAAIKTTEKINTA---ASDASNYASEKAGEAAKAASEAASKLKSKSEGVVGPAAEK
           D AG A    ++K  +A   A +A +YA +KAG+A   A +   + K  +    G A EK
Subjt:  ---DKAGDAAIKTTEKINTA---ASDASNYASEKAGEAAKAASEAASKLKSKSEGVVGPAAEK

Sequences

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CDS sequence

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mRNA sequence

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ATGGGGAGGAAAACGAGGACGTTAGTGGTGGCGGTGGTATGGCTGGTGTTGGTGGCGGAGAAATGCAGTGGGTTTGGTGAAGAAGCAGTAAAAGATGTGAAGAATAATAT
GAGTGAAATTGCGGAAGGTGCAAATCTTGATGAGAAAGCCGAAGCTGTCAAATCTAAGGCTTCTGAAGTATACACCGAGGCTAAGGACAAGACTGAGTCCTGGTCCAACT
GGGCTTACAACAAGATTTCCAGGGGATTAGGATTGAACGAAGAAGAAATAAAAGAGACCGCGCATAACGTAGCGGATAAAGCAGGGGATGCAGCCATTAAAACTACAGAA
AAAATTAACACAGCAGCCTCAGATGCATCTAATTACGCATCTGAGAAAGCGGGAGAGGCAGCGAAGGCGGCGTCGGAAGCGGCGAGCAAGCTGAAGAGCAAGTCGGAGGG
TGTGGTGGGGCCGGCGGCGGAGAAGGTGAAAGAGACGCTGGTGAGCGGAGATGTATGAGGCGGCGAAGGAGAAGAAGAATGAGAACTGCGAAACGGCGAGAGAAATGGCG
TCAAAGACGGCGGGGGAAATTGGGTGTAGGATTAGGGAGAAGAGTGCTGAGCTGTGAAGAAGTTGTTTTTGGTTTTGGGTTGAATTGTATTGATTTCGATTTTATTTTTC
GGTCTAGAGACTGAGTTGTAATGGATGCTTTCGTTGGGATGTTTAATAAAATATTGGTTGATCGAAGTGGAGAAGTGTTTTTAGTTTCG

Protein sequence

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MGRKTRTLVVAVVWLVLVAEKCSGFGEEAVKDVKNNMSEIAEGANLDEKAEAVKSKASEVYTEAKDKTESWSNWAYNKISRGLGLNEEEIKETAHNVADKAGDAAIKTTE
KINTAASDASNYASEKAGEAAKAASEAASKLKSKSEGVVGPAAEKVKETLVSGDV

CSPI04G05460 (gene) of Cucumber (PI 183967) v1 genome