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CSPI04G05480 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G05480
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionlate embryogenesis abundant protein D-29-like
Genome locationChr4:3726760..3727896
RNA-Seq ExpressionCSPI04G05480
SyntenyCSPI04G05480
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146505.1 late embryogenesis abundant protein D-29 [Cucumis sativus]1.0e-45100Show/hide
Query:  MGRKTMTLLVAVAVVWLVLVADKCSGFEEAVQDMKDNVKQMAEDAKLDEKAEAVKSKASEVYTDAKDKASSWSNWAYDKISAGLGLSEESKEKETAPNAA
        MGRKTMTLLVAVAVVWLVLVADKCSGFEEAVQDMKDNVKQMAEDAKLDEKAEAVKSKASEVYTDAKDKASSWSNWAYDKISAGLGLSEESKEKETAPNAA
Subjt:  MGRKTMTLLVAVAVVWLVLVADKCSGFEEAVQDMKDNVKQMAEDAKLDEKAEAVKSKASEVYTDAKDKASSWSNWAYDKISAGLGLSEESKEKETAPNAA

Query:  DKN
        DKN
Subjt:  DKN

XP_004146555.1 late embryogenesis abundant protein D-29 [Cucumis sativus]1.2e-2774.76Show/hide
Query:  MGRKTMTLLVAVAVVWLVLVADKCSGF-EEAVQDMKDNVKQMAEDAKLDEKAEAVKSKASEVYTDAKDKASSWSNWAYDKISAGLGLSEESKEKETAPNA
        MGRKT TL+  VAVVWLVLVA+KCSGF EEAV+D+K+N+ ++AE A LDEKAEAVKSKASEVYT+AKDK  SWSNWAY+KIS GLGL+EE + KETA N 
Subjt:  MGRKTMTLLVAVAVVWLVLVADKCSGF-EEAVQDMKDNVKQMAEDAKLDEKAEAVKSKASEVYTDAKDKASSWSNWAYDKISAGLGLSEESKEKETAPNA

Query:  ADK
        ADK
Subjt:  ADK

XP_008452082.1 PREDICTED: late embryogenesis abundant protein D-29-like [Cucumis melo]3.4e-2572.82Show/hide
Query:  MGRKTMTLLVAVAVVWLVLVADKCSG-FEEAVQDMKDNVKQMAEDAKLDEKAEAVKSKASEVYTDAKDKASSWSNWAYDKISAGLGLSEESKEKETAPNA
        MGRK MTL+  VAVV LVLVA+KC G  E+AVQD+KD++ + A+DAKLDEKAEAVKS ASEVY+DAKDKA SWSNWAYDKIS GLGLSEE + KE A + 
Subjt:  MGRKTMTLLVAVAVVWLVLVADKCSG-FEEAVQDMKDNVKQMAEDAKLDEKAEAVKSKASEVYTDAKDKASSWSNWAYDKISAGLGLSEESKEKETAPNA

Query:  ADK
        ADK
Subjt:  ADK

XP_008452083.1 PREDICTED: late embryogenesis abundant protein D-29-like [Cucumis melo]2.0e-3078.43Show/hide
Query:  MGRKTMTLLVAVAVVWLVLVADKCSGFEEAVQDMKDNVKQMAEDAKLDEKAEAVKSKASEVYTDAKDKASSWSNWAYDKISAGLGLSEESKEKETAPNAA
        MGRKT TL+  VAVVWLVLVA+KCSG+ EAV+D+KDNV ++AEDAKLDEKAEAVKS ASEVY+DAKDKA SWSNWAYDKIS GLGLSE+ + KETA N A
Subjt:  MGRKTMTLLVAVAVVWLVLVADKCSGFEEAVQDMKDNVKQMAEDAKLDEKAEAVKSKASEVYTDAKDKASSWSNWAYDKISAGLGLSEESKEKETAPNAA

Query:  DK
        DK
Subjt:  DK

XP_038906272.1 late embryogenesis abundant protein D-29 isoform X1 [Benincasa hispida]4.3e-2063.11Show/hide
Query:  MGRKTMTLLVAVAVVWLVLVADKCSGF-EEAVQDMKDNVKQMAEDAKLDEKAEAVKSKASEVYTDAKDKASSWSNWAYDKISAGLGLSEESKEKETAPNA
        MGR +M  L  VAVVWL+LVADKC G  EEA+QD+KDNV ++ +D  LDEKAEAVKS AS+V+ DAK+ A SWSNWAY KIS GLG + E + KETA   
Subjt:  MGRKTMTLLVAVAVVWLVLVADKCSGF-EEAVQDMKDNVKQMAEDAKLDEKAEAVKSKASEVYTDAKDKASSWSNWAYDKISAGLGLSEESKEKETAPNA

Query:  ADK
         DK
Subjt:  ADK

TrEMBL top hitse value%identityAlignment
A0A0A0KUJ5 Uncharacterized protein6.0e-2874.76Show/hide
Query:  MGRKTMTLLVAVAVVWLVLVADKCSGF-EEAVQDMKDNVKQMAEDAKLDEKAEAVKSKASEVYTDAKDKASSWSNWAYDKISAGLGLSEESKEKETAPNA
        MGRKT TL+  VAVVWLVLVA+KCSGF EEAV+D+K+N+ ++AE A LDEKAEAVKSKASEVYT+AKDK  SWSNWAY+KIS GLGL+EE + KETA N 
Subjt:  MGRKTMTLLVAVAVVWLVLVADKCSGF-EEAVQDMKDNVKQMAEDAKLDEKAEAVKSKASEVYTDAKDKASSWSNWAYDKISAGLGLSEESKEKETAPNA

Query:  ADK
        ADK
Subjt:  ADK

A0A0A0KY19 Late embryogenesis abundant4.9e-46100Show/hide
Query:  MGRKTMTLLVAVAVVWLVLVADKCSGFEEAVQDMKDNVKQMAEDAKLDEKAEAVKSKASEVYTDAKDKASSWSNWAYDKISAGLGLSEESKEKETAPNAA
        MGRKTMTLLVAVAVVWLVLVADKCSGFEEAVQDMKDNVKQMAEDAKLDEKAEAVKSKASEVYTDAKDKASSWSNWAYDKISAGLGLSEESKEKETAPNAA
Subjt:  MGRKTMTLLVAVAVVWLVLVADKCSGFEEAVQDMKDNVKQMAEDAKLDEKAEAVKSKASEVYTDAKDKASSWSNWAYDKISAGLGLSEESKEKETAPNAA

Query:  DKN
        DKN
Subjt:  DKN

A0A1S3BT31 late embryogenesis abundant protein D-29-like9.9e-3178.43Show/hide
Query:  MGRKTMTLLVAVAVVWLVLVADKCSGFEEAVQDMKDNVKQMAEDAKLDEKAEAVKSKASEVYTDAKDKASSWSNWAYDKISAGLGLSEESKEKETAPNAA
        MGRKT TL+  VAVVWLVLVA+KCSG+ EAV+D+KDNV ++AEDAKLDEKAEAVKS ASEVY+DAKDKA SWSNWAYDKIS GLGLSE+ + KETA N A
Subjt:  MGRKTMTLLVAVAVVWLVLVADKCSGFEEAVQDMKDNVKQMAEDAKLDEKAEAVKSKASEVYTDAKDKASSWSNWAYDKISAGLGLSEESKEKETAPNAA

Query:  DK
        DK
Subjt:  DK

A0A5A7TSE6 Late embryogenesis abundant protein D-29-like9.9e-3178.43Show/hide
Query:  MGRKTMTLLVAVAVVWLVLVADKCSGFEEAVQDMKDNVKQMAEDAKLDEKAEAVKSKASEVYTDAKDKASSWSNWAYDKISAGLGLSEESKEKETAPNAA
        MGRKT TL+  VAVVWLVLVA+KCSG+ EAV+D+KDNV ++AEDAKLDEKAEAVKS ASEVY+DAKDKA SWSNWAYDKIS GLGLSE+ + KETA N A
Subjt:  MGRKTMTLLVAVAVVWLVLVADKCSGFEEAVQDMKDNVKQMAEDAKLDEKAEAVKSKASEVYTDAKDKASSWSNWAYDKISAGLGLSEESKEKETAPNAA

Query:  DK
        DK
Subjt:  DK

A0A5D3D1U2 Late embryogenesis abundant protein D-29-like1.6e-2572.82Show/hide
Query:  MGRKTMTLLVAVAVVWLVLVADKCSG-FEEAVQDMKDNVKQMAEDAKLDEKAEAVKSKASEVYTDAKDKASSWSNWAYDKISAGLGLSEESKEKETAPNA
        MGRK MTL+  VAVV LVLVA+KC G  E+AVQD+KD++ + A+DAKLDEKAEAVKS ASEVY+DAKDKA SWSNWAYDKIS GLGLSEE + KE A + 
Subjt:  MGRKTMTLLVAVAVVWLVLVADKCSG-FEEAVQDMKDNVKQMAEDAKLDEKAEAVKSKASEVYTDAKDKASSWSNWAYDKISAGLGLSEESKEKETAPNA

Query:  ADK
        ADK
Subjt:  ADK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAGGAAAACAATGACGTTGTTGGTGGCGGTGGCGGTGGTATGGCTGGTGTTGGTGGCGGATAAATGCAGTGGGTTTGAAGAAGCAGTACAAGATATGAAGGACAA
TGTGAAGCAAATGGCGGAAGATGCAAAGCTTGATGAAAAAGCCGAAGCTGTCAAATCTAAGGCTTCTGAAGTATACACCGATGCTAAGGACAAGGCTTCCTCCTGGTCCA
ACTGGGCTTACGACAAGATTTCCGCGGGATTGGGATTGAGCGAAGAATCGAAGGAGAAAGAGACAGCTCCTAACGCAGCAGATAAAAATTAA
mRNA sequenceShow/hide mRNA sequence
CTTTTTTCCTTTATAACAAATATATGGGTTATTGTCAAACACATATTCAATGAGTTTTGTAATTGCTAATCTCCTAAATAACCGTAATGCATATAAATTTGCAAAAAGAA
AAGACTGAATGAGGAATGGGTAAACCTGATTTGGTGGAAATCGGACTACCAAGAACTAAAATTACCAAACTTGGAGAAAAGTGGATACGTGTCCTATTCAACGCAACCCT
CGAAGATACGACTGAGGTAAATAACCGCCACGTTTGATACAAAACAAGCCACGTAACCGTCTCCCCTCGCCGGCTTCTCTCCCAAAAACCTCCCAACCCCACATTCAAAT
ACCTAAACTTATAAACTCATAATTTCACTGCCCCAATCTCCATTCCCATTTCTTTTTTAATTTTTATATATAGTTTGTATTTTAGTTGGATCGGAGAAAAAAGAAGGAAG
AAAATTAGAAATAATGGGGAGGAAAACAATGACGTTGTTGGTGGCGGTGGCGGTGGTATGGCTGGTGTTGGTGGCGGATAAATGCAGTGGGTTTGAAGAAGCAGTACAAG
ATATGAAGGACAATGTGAAGCAAATGGCGGAAGATGCAAAGCTTGATGAAAAAGCCGAAGCTGTCAAATCTAAGGCTTCTGAAGTATACACCGATGCTAAGGACAAGGCT
TCCTCCTGGTCCAACTGGGCTTACGACAAGATTTCCGCGGGATTGGGATTGAGCGAAGAATCGAAGGAGAAAGAGACAGCTCCTAACGCAGCAGATAAAAATTAACACAG
CTGCTTCAGGTAAATTACGCATTATTGTTTTATCATTATCTCTAAATCAAAATGTTTGAAAAATTATATATAATATTTGAAAAATAATTCTACTTATTTTGGAAGAAATT
GGGTTGGTAATATACATTTTTTAATGGCCAGAATTGTTTTGCCTGTTATAGTC
Protein sequenceShow/hide protein sequence
MGRKTMTLLVAVAVVWLVLVADKCSGFEEAVQDMKDNVKQMAEDAKLDEKAEAVKSKASEVYTDAKDKASSWSNWAYDKISAGLGLSEESKEKETAPNAADKN