; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI04G05890 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G05890
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description40S ribosomal protein S10-1-like
Genome locationChr4:3985464..3987873
RNA-Seq ExpressionCSPI04G05890
SyntenyCSPI04G05890
Gene Ontology termsGO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR005326 - Plectin/S10, N-terminal
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR037447 - 40S Ribosomal protein S10


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044841.1 40S ribosomal protein S10-1-like [Cucumis melo var. makuwa]1.4e-9598.33Show/hide
Query:  ISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPF
        +S+KNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPF
Subjt:  ISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPF

Query:  GGPPGDRPRGPPRFEGGDRRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAPSSNLP
        GGPPGDRPRGPPRFEGG+RRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAPSSNLP
Subjt:  GGPPGDRPRGPPRFEGGDRRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAPSSNLP

TYK16623.1 40S ribosomal protein S10-1-like [Cucumis melo var. makuwa]2.9e-9698.35Show/hide
Query:  MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        +IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
Subjt:  MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGPPGDRPRGPPRFEGGDRRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAPSSNLP
        PFGGPPGDRPRGPPRFEGG+RRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAG YGGGAAPSSNLP
Subjt:  PFGGPPGDRPRGPPRFEGGDRRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAPSSNLP

XP_004146529.1 40S ribosomal protein S10-1 [Cucumis sativus]3.4e-9799.45Show/hide
Query:  MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
Subjt:  MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGPPGDRPRGPPRFEGGDRRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAPSSNLP
        PFGGPPGDRPRGPPRFEGG+RRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAPSSNLP
Subjt:  PFGGPPGDRPRGPPRFEGGDRRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAPSSNLP

XP_008452010.1 PREDICTED: 40S ribosomal protein S10-1-like [Cucumis melo]9.9e-9798.9Show/hide
Query:  MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
Subjt:  MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGPPGDRPRGPPRFEGGDRRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAPSSNLP
        PFGGPPGDRPRGPPRFEGG+RRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAG YGGGAAPSSNLP
Subjt:  PFGGPPGDRPRGPPRFEGGDRRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAPSSNLP

XP_022985005.1 40S ribosomal protein S10-1-like [Cucurbita maxima]1.4e-9598.35Show/hide
Query:  MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
Subjt:  MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGPPGDRPRGPPRFEGGDRRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAPSSNLP
        PFGGPPGDRPRGPPRFEGG+RRFGDRDGYRGGPRGP GEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAA SSNLP
Subjt:  PFGGPPGDRPRGPPRFEGGDRRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAPSSNLP

TrEMBL top hitse value%identityAlignment
A0A0A0KUQ3 S10_plectin domain-containing protein1.6e-9799.45Show/hide
Query:  MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
Subjt:  MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGPPGDRPRGPPRFEGGDRRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAPSSNLP
        PFGGPPGDRPRGPPRFEGG+RRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAPSSNLP
Subjt:  PFGGPPGDRPRGPPRFEGGDRRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAPSSNLP

A0A1S3BST3 40S ribosomal protein S10-1-like4.8e-9798.9Show/hide
Query:  MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
Subjt:  MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGPPGDRPRGPPRFEGGDRRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAPSSNLP
        PFGGPPGDRPRGPPRFEGG+RRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAG YGGGAAPSSNLP
Subjt:  PFGGPPGDRPRGPPRFEGGDRRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAPSSNLP

A0A5A7TTJ6 40S ribosomal protein S10-1-like6.9e-9698.33Show/hide
Query:  ISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPF
        +S+KNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPF
Subjt:  ISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPF

Query:  GGPPGDRPRGPPRFEGGDRRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAPSSNLP
        GGPPGDRPRGPPRFEGG+RRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAPSSNLP
Subjt:  GGPPGDRPRGPPRFEGGDRRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAPSSNLP

A0A5D3CXK7 40S ribosomal protein S10-1-like1.4e-9698.35Show/hide
Query:  MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        +IISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
Subjt:  MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGPPGDRPRGPPRFEGGDRRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAPSSNLP
        PFGGPPGDRPRGPPRFEGG+RRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAG YGGGAAPSSNLP
Subjt:  PFGGPPGDRPRGPPRFEGGDRRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAPSSNLP

A0A6J1JA51 40S ribosomal protein S10-1-like6.9e-9698.35Show/hide
Query:  MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
Subjt:  MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGPPGDRPRGPPRFEGGDRRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAPSSNLP
        PFGGPPGDRPRGPPRFEGG+RRFGDRDGYRGGPRGP GEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAA SSNLP
Subjt:  PFGGPPGDRPRGPPRFEGGDRRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAPSSNLP

SwissProt top hitse value%identityAlignment
P0DKK8 40S ribosomal protein S10-11.1e-7480.66Show/hide
Query:  MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MII +KNR EI KYLFQEGV YAKKDYNLAKHP+IDVPNLQVIKLMQSFKSKEYVRETF+W +YYWYLTNDGIE LR YLNLPSEIVPATLKK A+P GR
Subjt:  MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFG-GPPGDRPRGPPRFEGGDRRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAPSSN
        PFG GPPGDRPRGPPRFEG   RFGDRDGYRGGPRG  G+FGG+KGGAPA+++PSF   GGRPGFGRG G  G GA P+S+
Subjt:  PFG-GPPGDRPRGPPRFEGGDRRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAPSSN

P0DKK9 40S ribosomal protein S10-21.1e-7480.66Show/hide
Query:  MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MII +KNR EI KYLFQEGV YAKKDYNLAKHP+IDVPNLQVIKLMQSFKSKEYVRETF+W +YYWYLTNDGIE LR YLNLPSEIVPATLKK A+P GR
Subjt:  MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFG-GPPGDRPRGPPRFEGGDRRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAPSSN
        PFG GPPGDRPRGPPRFEG   RFGDRDGYRGGPRG  G+FGG+KGGAPA+++PSF   GGRPGFGRG G  G GA P+S+
Subjt:  PFG-GPPGDRPRGPPRFEGGDRRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAPSSN

Q9FFS8 40S ribosomal protein S10-22.0e-6879.46Show/hide
Query:  MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEID-VPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAG
        MIISE NRREISKYLF+EGV +AKKD+NL +HP I+ VPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTN+GI+FLRTYLNLPSEIVPATLKKQ KP G
Subjt:  MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEID-VPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAG

Query:  RPFGGPPGDRPRGPPRFEGGDRRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSF-GGPGG-RPGFGRGAGSYGGGAAPSSNLP
        RPFGG  GDRPRGPPR + G+RRFGDRDGYRGGP+  GGE+ GDK GAPADY+P F GG GG R GFGRGAG +GGGAA  S+LP
Subjt:  RPFGGPPGDRPRGPPRFEGGDRRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSF-GGPGG-RPGFGRGAGSYGGGAAPSSNLP

Q9LTF2 40S ribosomal protein S10-39.4e-7480.87Show/hide
Query:  MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIISE NR+EI KYLF+EGVC+AKKD+NLAKHP IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GR
Subjt:  MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGPPGDRPRGPPRFEGGDR-RFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAPSSNLP
        PFGGPPGDR RG PR EGGDR RFGDRDGYR GPR  GGEFGG+KGGAPADY+PSF G G   GFGRGAG Y   A   S LP
Subjt:  PFGGPPGDRPRGPPRFEGGDR-RFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAPSSNLP

Q9SW09 40S ribosomal protein S10-11.4e-7478.57Show/hide
Query:  MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIISE NRREI KYLF+EGVC+AKKD+NL KHP IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GR
Subjt:  MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGPPGDRPRGPPRFEGGDRRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAPSSNLP
        PFGGPPGDR RGPPR +G   RFGDRDGYRGGPRG     G +KGGAPAD++PSF G GGRPGFGRGAG Y   A   S  P
Subjt:  PFGGPPGDRPRGPPRFEGGDRRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAPSSNLP

Arabidopsis top hitse value%identityAlignment
AT4G25740.1 RNA binding Plectin/S10 domain-containing protein1.0e-7578.57Show/hide
Query:  MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIISE NRREI KYLF+EGVC+AKKD+NL KHP IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GR
Subjt:  MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGPPGDRPRGPPRFEGGDRRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAPSSNLP
        PFGGPPGDR RGPPR +G   RFGDRDGYRGGPRG     G +KGGAPAD++PSF G GGRPGFGRGAG Y   A   S  P
Subjt:  PFGGPPGDRPRGPPRFEGGDRRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAPSSNLP

AT4G25740.2 RNA binding Plectin/S10 domain-containing protein1.3e-5965.93Show/hide
Query:  MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIISE NRREI KYLF+EGVC+AKKD+NL KHP IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GR
Subjt:  MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGPPGDRPRGPPRFEGGDRRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAPSSNLP
        PFGGP G                                 G +KGGAPAD++PSF G GGRPGFGRGAG Y   A   S  P
Subjt:  PFGGPPGDRPRGPPRFEGGDRRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAPSSNLP

AT5G41520.1 RNA binding Plectin/S10 domain-containing protein1.4e-6979.46Show/hide
Query:  MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEID-VPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAG
        MIISE NRREISKYLF+EGV +AKKD+NL +HP I+ VPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTN+GI+FLRTYLNLPSEIVPATLKKQ KP G
Subjt:  MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEID-VPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAG

Query:  RPFGGPPGDRPRGPPRFEGGDRRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSF-GGPGG-RPGFGRGAGSYGGGAAPSSNLP
        RPFGG  GDRPRGPPR + G+RRFGDRDGYRGGP+  GGE+ GDK GAPADY+P F GG GG R GFGRGAG +GGGAA  S+LP
Subjt:  RPFGGPPGDRPRGPPRFEGGDRRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSF-GGPGG-RPGFGRGAGSYGGGAAPSSNLP

AT5G41520.2 RNA binding Plectin/S10 domain-containing protein1.6e-4979.86Show/hide
Query:  MQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGDRRFGDRDGYRGGPRGPGGEFGGDKG
        MQSFKSKEYVRETFAWMHYYW+LTN+GI+FLRTYLNLPSEIVPATLKKQ KP GRPFGG  GDRPRGPPR + G+RRFGDRDGYRGGP+  GGE+ GDK 
Subjt:  MQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGGDRRFGDRDGYRGGPRGPGGEFGGDKG

Query:  GAPADYRPSF-GGPGG-RPGFGRGAGSYGGGAAPSSNLP
        GAPADY+P F GG GG R GFGRGAG +GGGAA  S+LP
Subjt:  GAPADYRPSF-GGPGG-RPGFGRGAGSYGGGAAPSSNLP

AT5G52650.1 RNA binding Plectin/S10 domain-containing protein6.7e-7580.87Show/hide
Query:  MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR
        MIISE NR+EI KYLF+EGVC+AKKD+NLAKHP IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK AKP GR
Subjt:  MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGR

Query:  PFGGPPGDRPRGPPRFEGGDR-RFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAPSSNLP
        PFGGPPGDR RG PR EGGDR RFGDRDGYR GPR  GGEFGG+KGGAPADY+PSF G G   GFGRGAG Y   A   S LP
Subjt:  PFGGPPGDRPRGPPRFEGGDR-RFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAPSSNLP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTATTTCAGAAAAGAACCGTAGGGAAATCTCCAAATATCTCTTTCAAGAGGGGGTTTGCTATGCCAAGAAGGATTACAATTTGGCCAAGCACCCAGAAATCGACGT
GCCTAACTTGCAGGTTATTAAGTTGATGCAGAGCTTCAAGTCCAAGGAATATGTGCGCGAGACATTTGCCTGGATGCATTACTACTGGTACCTCACCAATGATGGTATTG
AGTTTCTTAGGACTTACCTCAATCTCCCGTCTGAAATTGTCCCTGCTACCTTGAAGAAACAAGCTAAGCCCGCTGGTAGGCCCTTTGGCGGACCACCCGGCGATCGTCCA
CGGGGTCCACCTCGTTTTGAGGGTGGTGATAGGAGGTTTGGTGACCGTGATGGTTACCGTGGAGGTCCTCGTGGACCTGGCGGTGAGTTTGGTGGTGACAAAGGAGGAGC
TCCTGCAGATTACAGACCTTCGTTTGGGGGTCCTGGTGGAAGGCCAGGTTTTGGCCGTGGAGCTGGTAGCTACGGCGGAGGAGCTGCACCAAGCTCAAACCTTCCTTGA
mRNA sequenceShow/hide mRNA sequence
GCCCACTCAACACCCACAAACCCTAGCCGCTACCTCATCCTCCCTCTCTTTTCACGGCTGCTCACTCCCTCTCTTTTTACACCTGCCCGTTCTCCTTCTTCGCGCCTCTT
CCCTTTTCTGCTACTATCTTCAGTACTTGCTGAGCTTCAACAATGATTATTTCAGAAAAGAACCGTAGGGAAATCTCCAAATATCTCTTTCAAGAGGGGGTTTGCTATGC
CAAGAAGGATTACAATTTGGCCAAGCACCCAGAAATCGACGTGCCTAACTTGCAGGTTATTAAGTTGATGCAGAGCTTCAAGTCCAAGGAATATGTGCGCGAGACATTTG
CCTGGATGCATTACTACTGGTACCTCACCAATGATGGTATTGAGTTTCTTAGGACTTACCTCAATCTCCCGTCTGAAATTGTCCCTGCTACCTTGAAGAAACAAGCTAAG
CCCGCTGGTAGGCCCTTTGGCGGACCACCCGGCGATCGTCCACGGGGTCCACCTCGTTTTGAGGGTGGTGATAGGAGGTTTGGTGACCGTGATGGTTACCGTGGAGGTCC
TCGTGGACCTGGCGGTGAGTTTGGTGGTGACAAAGGAGGAGCTCCTGCAGATTACAGACCTTCGTTTGGGGGTCCTGGTGGAAGGCCAGGTTTTGGCCGTGGAGCTGGTA
GCTACGGCGGAGGAGCTGCACCAAGCTCAAACCTTCCTTGAAAAGTATGGTCATACAAGCAGTTCAATGAATTTTCAGTGGAACGAGTTAGCAGCTTGAGTGAAGAGTTT
GTTAGCTTTTTTTTCCCCCCCTTTCATTTAGCTTATGGGAATTTTATAAATTCAAAATTTCATTGTGCAAATTGAAGTTTACAAGAACTACTGTTTTTCAAGTATAAATT
TTGTTCTTCTCTTTGAGCGCCTTATTATCGTTTGTACCATTTTAGCAAGATTTAAATTTTAATGTTTTTGAAGTCTGATTGTCTCAGGAAAAAGGGAACAAGCATTTTAA
TCAATTTCTTATAATTATAATTAAACTATTTTCTTCCA
Protein sequenceShow/hide protein sequence
MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRP
RGPPRFEGGDRRFGDRDGYRGGPRGPGGEFGGDKGGAPADYRPSFGGPGGRPGFGRGAGSYGGGAAPSSNLP