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CSPI04G06190 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G06190
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionarabinogalactan peptide 22-like
Genome locationChr4:4269358..4270766
RNA-Seq ExpressionCSPI04G06190
SyntenyCSPI04G06190
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR009424 - Arabinogalactan protein 16/20/22/41


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149756.1 arabinogalactan protein 41 [Cucumis sativus]2.6e-26100Show/hide
Query:  MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADL
        MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADL
Subjt:  MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADL

XP_008451971.1 PREDICTED: arabinogalactan peptide 22-like [Cucumis melo]4.1e-2497.01Show/hide
Query:  MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADL
        MAVSRSSF LLAATALIFAIFLPVAHP SLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADL
Subjt:  MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADL

XP_022136454.1 arabinogalactan peptide 22-like [Momordica charantia]3.5e-2389.55Show/hide
Query:  MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADL
        MAVSR+SFG +AA ALIFAIFLPVAHPHSL PAPAP+SDGTSIDQGIAYVLM+VALALTYLIHNADL
Subjt:  MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADL

XP_022931316.1 arabinogalactan peptide 22-like [Cucurbita moschata]2.3e-2289.55Show/hide
Query:  MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADL
        MAVSR+SFG +AA ALIFAIFLPVA P SLAPAPAPTSDGTSIDQGIAYVLM+VALALTYLIHNADL
Subjt:  MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADL

XP_038882280.1 arabinogalactan protein 22-like [Benincasa hispida]2.7e-2392.54Show/hide
Query:  MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADL
        MAVS +SFG LAA ALIFAIFLPVA PHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADL
Subjt:  MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADL

TrEMBL top hitse value%identityAlignment
A0A0A0KZS8 Uncharacterized protein1.3e-26100Show/hide
Query:  MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADL
        MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADL
Subjt:  MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADL

A0A1S3BS55 arabinogalactan peptide 22-like2.0e-2497.01Show/hide
Query:  MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADL
        MAVSRSSF LLAATALIFAIFLPVAHP SLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADL
Subjt:  MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADL

A0A5D3CYF3 Arabinogalactan peptide 22-like2.0e-2497.01Show/hide
Query:  MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADL
        MAVSRSSF LLAATALIFAIFLPVAHP SLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADL
Subjt:  MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADL

A0A6J1C4C2 arabinogalactan peptide 22-like1.7e-2389.55Show/hide
Query:  MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADL
        MAVSR+SFG +AA ALIFAIFLPVAHPHSL PAPAP+SDGTSIDQGIAYVLM+VALALTYLIHNADL
Subjt:  MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADL

A0A6J1J4V7 arabinogalactan peptide 201.1e-2289.55Show/hide
Query:  MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADL
        MAVSR+SFG +AA ALIFAIFLPVA P SLAPAPAPTSDGTSIDQGIAYVLM+VALALTYLIHNADL
Subjt:  MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADL

SwissProt top hitse value%identityAlignment
O82337 Arabinogalactan protein 166.9e-1465.08Show/hide
Query:  SRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNAD
        SR+S    A  + +FA+ L +A   SLAPAPAPTSDGTSIDQGIAY+LM+VAL LTYLIH  D
Subjt:  SRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNAD

Q8L9T8 Arabinogalactan protein 412.5e-1669.84Show/hide
Query:  MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIH
        M+ SR  FG+    ++IFAI LP+AH  S APAPAPTSDGT+IDQGIAYVLM+VAL LTYLIH
Subjt:  MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIH

Q9FK16 Arabinogalactan protein 222.4e-1466.67Show/hide
Query:  MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIH
        MA  +    +LA   +I  I LP+A  HS +PAPAPTSDGTSIDQGIAYVLMMVALALTY IH
Subjt:  MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIH

Q9M373 Arabinogalactan protein 206.2e-1565.08Show/hide
Query:  SRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNAD
        SR+S  ++A  A +FA+  P A   SLAPAP+PTSDGTSIDQGIAY+LM+VAL LTYLIH  D
Subjt:  SRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNAD

Arabidopsis top hitse value%identityAlignment
AT2G46330.1 arabinogalactan protein 164.9e-1565.08Show/hide
Query:  SRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNAD
        SR+S    A  + +FA+ L +A   SLAPAPAPTSDGTSIDQGIAY+LM+VAL LTYLIH  D
Subjt:  SRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNAD

AT3G61640.1 arabinogalactan protein 204.4e-1665.08Show/hide
Query:  SRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNAD
        SR+S  ++A  A +FA+  P A   SLAPAP+PTSDGTSIDQGIAY+LM+VAL LTYLIH  D
Subjt:  SRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNAD

AT5G24105.1 arabinogalactan protein 411.8e-1769.84Show/hide
Query:  MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIH
        M+ SR  FG+    ++IFAI LP+AH  S APAPAPTSDGT+IDQGIAYVLM+VAL LTYLIH
Subjt:  MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIH

AT5G53250.1 arabinogalactan protein 221.7e-1566.67Show/hide
Query:  MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIH
        MA  +    +LA   +I  I LP+A  HS +PAPAPTSDGTSIDQGIAYVLMMVALALTY IH
Subjt:  MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGTTTCTAGGTCGTCTTTTGGACTTTTGGCTGCCACTGCCCTCATCTTTGCCATCTTCTTGCCCGTTGCTCACCCACATTCCTTGGCTCCCGCACCCGCTCCCAC
CAGCGATGGGACATCCATAGATCAAGGAATAGCTTATGTATTGATGATGGTGGCATTGGCGCTCACATATCTCATCCACAACGCTGACTTATAA
mRNA sequenceShow/hide mRNA sequence
AAAGAATATAAACCTAACCCTATAAAACGCAGTGGTTGCAAAGATTTGATTTCCTCCGTCTCTCTCCCATCGCTAAACACTTCCTCTGTTTCCGTTCAGAGATTTCTTCT
TCATTTCGCCTTTCGAGGAGGGAAAGAGAGATTCCTTTCTCTCTCTCTCTGCGATCCTCTTCAACCCATTGAAGCCTACACCCATCGCAGAGAGAGATCCTCCCTCCACA
CCACCATTCTCACTCCAATGGCGGTTTCTAGGTCGTCTTTTGGACTTTTGGCTGCCACTGCCCTCATCTTTGCCATCTTCTTGCCCGTTGCTCACCCACATTCCTTGGCT
CCCGCACCCGCTCCCACCAGCGATGGGACATCCATAGATCAAGGAATAGCTTATGTATTGATGATGGTGGCATTGGCGCTCACATATCTCATCCACAACGCTGACTTATA
AAACAACGTCTAAAAGATTTGTATCAAAGCATTTGTAGAACATCTTTGATCAAAGGGAGGGAAAGGATTTTAGTTAGAAATTAATGCAGATGGGGTTTTTGAGGGAATTT
GATTGTTTTTTTTTTTTTTTTTTTCTGCACATTGTAATTCCTTTGGAACCCTCTTTCGATCAAGGGAGAAGGGAATCTAGTTAGAAATGCAAATGGGTTTTGAGGGATTT
TATTACTATTTATTTTTTCTTTCAAAAGTAGTTCATTTGGTTGTTTCTGTTTTTTGGTCTTTATTTCTAATGATGAGTCTGTTTGTGTGGTCTCTTTGTATTGCTATGTA
CAGTGTCCTAATTTGGAATGAGATTTGTTGGGGTTTCCCTATTTTTCTTT
Protein sequenceShow/hide protein sequence
MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADL