; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI04G06270 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G06270
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionWD_REPEATS_REGION domain-containing protein
Genome locationChr4:4323820..4328485
RNA-Seq ExpressionCSPI04G06270
SyntenyCSPI04G06270
Gene Ontology termsGO:0015031 - protein transport (biological process)
GO:0034198 - cellular response to amino acid starvation (biological process)
GO:1904263 - positive regulation of TORC1 signaling (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0031080 - nuclear pore outer ring (cellular component)
GO:0035859 - Seh1-associated complex (cellular component)
GO:0005198 - structural molecule activity (molecular function)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR001680 - WD40 repeat
IPR015943 - WD40/YVTN repeat-like-containing domain superfamily
IPR036322 - WD40-repeat-containing domain superfamily
IPR037363 - Sec13/Seh1 family
IPR037597 - Nucleoporin Seh1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044921.1 protein SEH1 [Cucumis melo var. makuwa]3.1e-16589.88Show/hide
Query:  MEKAMATFHKGTLCSAWNYSSTRLATASSDGTLVIFDSPHPSSSSTSFTPTSNFKAHEVAITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK
        MEKAMATF KGTLCSAWN+SS+RLATASSDGTL                      AHE AITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPL+WK
Subjt:  MEKAMATFHKGTLCSAWNYSSTRLATASSDGTLVIFDSPHPSSSSTSFTPTSNFKAHEVAITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK

Query:  LCKLFKSNSSQILDLQFGNSSSGLKMIAAFSDGYIKVYELMDPLNLKNWQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGEQQSSFVLAFSSNTPQLN
        LCKLFKSNSSQILDLQFGNSSSGLKMIAAFSDGYIKVYELMDPL+LK+WQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGEQQSSFVLAFSSNTPQLN
Subjt:  LCKLFKSNSSQILDLQFGNSSSGLKMIAAFSDGYIKVYELMDPLNLKNWQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGEQQSSFVLAFSSNTPQLN

Query:  SAKVWEFDQAHHRWLPVAELALTAEKGDEVYAVAWAQNIGRPYEVIAVATQRGIAIWHLGLSPDTDGRLSRERVALLSGHNGEVWEMVWDMGGMTLASTG
        SAKVWEFDQAH RWLPVAELALTAEKGDEVYAVAWAQNIGRPYEVIAVATQRGIAIW LGLSPDTDGRLS ERVALLSGHNGEVWEM WDMGGMTLASTG
Subjt:  SAKVWEFDQAHHRWLPVAELALTAEKGDEVYAVAWAQNIGRPYEVIAVATQRGIAIWHLGLSPDTDGRLSRERVALLSGHNGEVWEMVWDMGGMTLASTG

Query:  KDGMVRLWQSNLNGVWHQHAAFEPTS
        KDGMVRLWQSNLNGVWHQHAAFEPTS
Subjt:  KDGMVRLWQSNLNGVWHQHAAFEPTS

XP_004149752.1 protein SEH1 [Cucumis sativus]2.2e-18799.08Show/hide
Query:  MEKAMATFHKGTLCSAWNYSSTRLATASSDGTLVIFDSPHPSSSSTSFTPTSNFKAHEVAITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK
        MEKAMATFHKGTLCSAWNYSSTRLATASSDGTLVIFDSPHPSSSSTSFTPTSNFKAHEVAITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK
Subjt:  MEKAMATFHKGTLCSAWNYSSTRLATASSDGTLVIFDSPHPSSSSTSFTPTSNFKAHEVAITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK

Query:  LCKLFKSNSSQILDLQFGNSSSGLKMIAAFSDGYIKVYELMDPLNLKNWQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGEQQSSFVLAFSSNTPQLN
        LCKLFKSNSSQILDLQFGNSSSGLKMIAAFSDGYIKVYELMDPLNLKNWQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGEQQSSFV+AFSSNTPQLN
Subjt:  LCKLFKSNSSQILDLQFGNSSSGLKMIAAFSDGYIKVYELMDPLNLKNWQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGEQQSSFVLAFSSNTPQLN

Query:  SAKVWEFDQAHHRWLPVAELALTAEKGDEVYAVAWAQNIGRPYEVIAVATQRGIAIWHLGLSPDTDGRLSRERVALLSGHNGEVWEMVWDMGGMTLASTG
        SAKVWEFDQAHHRWLPVAELALTAEKGDEVYAVAWAQNIGRPYEVIAVATQRGIAIWHLGLSPD DGRLSRERVALLSGHNGEVWEM WDMGGMTLASTG
Subjt:  SAKVWEFDQAHHRWLPVAELALTAEKGDEVYAVAWAQNIGRPYEVIAVATQRGIAIWHLGLSPDTDGRLSRERVALLSGHNGEVWEMVWDMGGMTLASTG

Query:  KDGMVRLWQSNLNGVWHQHAAFEPTS
        KDGMVRLWQSNLNGVWHQHAAFEPTS
Subjt:  KDGMVRLWQSNLNGVWHQHAAFEPTS

XP_008451932.1 PREDICTED: protein SEH1 [Cucumis melo]5.7e-18096.01Show/hide
Query:  MEKAMATFHKGTLCSAWNYSSTRLATASSDGTLVIFDSPHPSSSSTSFTPTSNFKAHEVAITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK
        MEKAMATF KGTLCSAWN+SS+RLATASSDGTLVIFDSPHPSSSSTS T TSNFKAHE AITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPL+WK
Subjt:  MEKAMATFHKGTLCSAWNYSSTRLATASSDGTLVIFDSPHPSSSSTSFTPTSNFKAHEVAITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK

Query:  LCKLFKSNSSQILDLQFGNSSSGLKMIAAFSDGYIKVYELMDPLNLKNWQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGEQQSSFVLAFSSNTPQLN
        LCKLFKSNSSQILDLQFGNSSSGLKMIAAFSDGYIKVYELMDPL+LK+WQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGEQQSSFVLAFSSNTPQLN
Subjt:  LCKLFKSNSSQILDLQFGNSSSGLKMIAAFSDGYIKVYELMDPLNLKNWQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGEQQSSFVLAFSSNTPQLN

Query:  SAKVWEFDQAHHRWLPVAELALTAEKGDEVYAVAWAQNIGRPYEVIAVATQRGIAIWHLGLSPDTDGRLSRERVALLSGHNGEVWEMVWDMGGMTLASTG
        SAKVWEFDQAH RWLPVAELALTAEKGDEVYAVAWAQNIGRPYEVIAVATQRGIAIW LGLSPDTDGRLS ERVALLSGHNGEVWEM WDMGGMTLASTG
Subjt:  SAKVWEFDQAHHRWLPVAELALTAEKGDEVYAVAWAQNIGRPYEVIAVATQRGIAIWHLGLSPDTDGRLSRERVALLSGHNGEVWEMVWDMGGMTLASTG

Query:  KDGMVRLWQSNLNGVWHQHAAFEPTS
        KDGMVRLWQSNLNGVWHQHAAFEPTS
Subjt:  KDGMVRLWQSNLNGVWHQHAAFEPTS

XP_022136602.1 protein SEH1 [Momordica charantia]1.6e-16689.3Show/hide
Query:  MEKAMATFHKGTLCSAWNYSSTRLATASSDGTLVIFDSPHPSSSSTSFTPTSNFKAHEVAITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK
        ME AMA+F KGTLCSAWNYS++RLATAS DGTLVIFDSP PSSSSTS T TSNFKAHE AI KIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK
Subjt:  MEKAMATFHKGTLCSAWNYSSTRLATASSDGTLVIFDSPHPSSSSTSFTPTSNFKAHEVAITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK

Query:  LCKLFKSNSSQILDLQFGNSSSGLKMIAAFSDGYIKVYELMDPLNLKNWQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGE-QQSSFVLAFSSNTPQL
        LCK FKSNS+Q+LD+QFGNSSSGLKMIAAFS  ++KVYELMDPL+LKNWQLQAEFQNVIDSISTVRK+SC SASISWNPHRGE QQSSFVLA +SNTPQL
Subjt:  LCKLFKSNSSQILDLQFGNSSSGLKMIAAFSDGYIKVYELMDPLNLKNWQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGE-QQSSFVLAFSSNTPQL

Query:  NSAKVWEFDQAHHRWLPVAELALTAEKGDEVYAVAWAQNIGRPYEVIAVATQRGIAIWHLGLSPDTDGRLSRERVALLSGHNGEVWEMVWDMGGMTLAST
        NSAKVWEFDQAH RWLPVAELAL A+KGDEVYAVAWAQNIGRPYEVIAVATQ+GIAIWHLG +PD DGRLS ERVALLSGHNGEVWEM WDMGGMTLAST
Subjt:  NSAKVWEFDQAHHRWLPVAELALTAEKGDEVYAVAWAQNIGRPYEVIAVATQRGIAIWHLGLSPDTDGRLSRERVALLSGHNGEVWEMVWDMGGMTLAST

Query:  GKDGMVRLWQSNLNGVWHQHAAFEPTS
        GKDGMVRLWQSNLNGVWHQ AAFEPTS
Subjt:  GKDGMVRLWQSNLNGVWHQHAAFEPTS

XP_038897768.1 protein SEH1 [Benincasa hispida]2.9e-17191.1Show/hide
Query:  MEKAMATFHKGTLCSAWNYSSTRLATASSDGTLVIFDSPHPSSSSTSFTPTSNFKAHEVAITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK
        MEKAMAT  KGTLCSAWNYS+ RLAT S+DGTL+IFDSP PSSSSTS T TSNFK HE AI KIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK
Subjt:  MEKAMATFHKGTLCSAWNYSSTRLATASSDGTLVIFDSPHPSSSSTSFTPTSNFKAHEVAITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK

Query:  LCKLFKSNSSQILDLQFGNSSSGLKMIAAFSDGYIKVYELMDPLNLKNWQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGEQQSSFVLAFSSNTPQLN
        LCK FK NSSQILD+QFGNSSSGLKMIAAFSDG+IKVYELMDPL+LK+WQLQAEFQNVIDSISTVRK+ CSSASISWNPHRGEQQ SFVLAFSSNTPQLN
Subjt:  LCKLFKSNSSQILDLQFGNSSSGLKMIAAFSDGYIKVYELMDPLNLKNWQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGEQQSSFVLAFSSNTPQLN

Query:  SAKVWEFDQAHHRWLPVAELALTAEKGDEVYAVAWAQNIGRPYEVIAVATQRGIAIWHLGLSPDTDGRLSRERVALLSGHNGEVWEMVWDMGGMTLASTG
        SAKVWEFDQAH RWLPVAELALTA+KGDEVYAVAWAQNIGRPYEVIAVATQ+GIAIW LGLSPDTDGRLS ERVALLSGHNGEVWEM WDMGGMTLASTG
Subjt:  SAKVWEFDQAHHRWLPVAELALTAEKGDEVYAVAWAQNIGRPYEVIAVATQRGIAIWHLGLSPDTDGRLSRERVALLSGHNGEVWEMVWDMGGMTLASTG

Query:  KDGMVRLWQSNLNGVWHQHAAFEPTS
        KDGMVRLWQSNLNGVWHQHA FEPTS
Subjt:  KDGMVRLWQSNLNGVWHQHAAFEPTS

TrEMBL top hitse value%identityAlignment
A0A0A0KWZ8 WD_REPEATS_REGION domain-containing protein1.1e-18799.08Show/hide
Query:  MEKAMATFHKGTLCSAWNYSSTRLATASSDGTLVIFDSPHPSSSSTSFTPTSNFKAHEVAITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK
        MEKAMATFHKGTLCSAWNYSSTRLATASSDGTLVIFDSPHPSSSSTSFTPTSNFKAHEVAITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK
Subjt:  MEKAMATFHKGTLCSAWNYSSTRLATASSDGTLVIFDSPHPSSSSTSFTPTSNFKAHEVAITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK

Query:  LCKLFKSNSSQILDLQFGNSSSGLKMIAAFSDGYIKVYELMDPLNLKNWQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGEQQSSFVLAFSSNTPQLN
        LCKLFKSNSSQILDLQFGNSSSGLKMIAAFSDGYIKVYELMDPLNLKNWQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGEQQSSFV+AFSSNTPQLN
Subjt:  LCKLFKSNSSQILDLQFGNSSSGLKMIAAFSDGYIKVYELMDPLNLKNWQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGEQQSSFVLAFSSNTPQLN

Query:  SAKVWEFDQAHHRWLPVAELALTAEKGDEVYAVAWAQNIGRPYEVIAVATQRGIAIWHLGLSPDTDGRLSRERVALLSGHNGEVWEMVWDMGGMTLASTG
        SAKVWEFDQAHHRWLPVAELALTAEKGDEVYAVAWAQNIGRPYEVIAVATQRGIAIWHLGLSPD DGRLSRERVALLSGHNGEVWEM WDMGGMTLASTG
Subjt:  SAKVWEFDQAHHRWLPVAELALTAEKGDEVYAVAWAQNIGRPYEVIAVATQRGIAIWHLGLSPDTDGRLSRERVALLSGHNGEVWEMVWDMGGMTLASTG

Query:  KDGMVRLWQSNLNGVWHQHAAFEPTS
        KDGMVRLWQSNLNGVWHQHAAFEPTS
Subjt:  KDGMVRLWQSNLNGVWHQHAAFEPTS

A0A1S3BTS7 protein SEH12.8e-18096.01Show/hide
Query:  MEKAMATFHKGTLCSAWNYSSTRLATASSDGTLVIFDSPHPSSSSTSFTPTSNFKAHEVAITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK
        MEKAMATF KGTLCSAWN+SS+RLATASSDGTLVIFDSPHPSSSSTS T TSNFKAHE AITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPL+WK
Subjt:  MEKAMATFHKGTLCSAWNYSSTRLATASSDGTLVIFDSPHPSSSSTSFTPTSNFKAHEVAITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK

Query:  LCKLFKSNSSQILDLQFGNSSSGLKMIAAFSDGYIKVYELMDPLNLKNWQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGEQQSSFVLAFSSNTPQLN
        LCKLFKSNSSQILDLQFGNSSSGLKMIAAFSDGYIKVYELMDPL+LK+WQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGEQQSSFVLAFSSNTPQLN
Subjt:  LCKLFKSNSSQILDLQFGNSSSGLKMIAAFSDGYIKVYELMDPLNLKNWQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGEQQSSFVLAFSSNTPQLN

Query:  SAKVWEFDQAHHRWLPVAELALTAEKGDEVYAVAWAQNIGRPYEVIAVATQRGIAIWHLGLSPDTDGRLSRERVALLSGHNGEVWEMVWDMGGMTLASTG
        SAKVWEFDQAH RWLPVAELALTAEKGDEVYAVAWAQNIGRPYEVIAVATQRGIAIW LGLSPDTDGRLS ERVALLSGHNGEVWEM WDMGGMTLASTG
Subjt:  SAKVWEFDQAHHRWLPVAELALTAEKGDEVYAVAWAQNIGRPYEVIAVATQRGIAIWHLGLSPDTDGRLSRERVALLSGHNGEVWEMVWDMGGMTLASTG

Query:  KDGMVRLWQSNLNGVWHQHAAFEPTS
        KDGMVRLWQSNLNGVWHQHAAFEPTS
Subjt:  KDGMVRLWQSNLNGVWHQHAAFEPTS

A0A5A7TTR9 Protein SEH11.5e-16589.88Show/hide
Query:  MEKAMATFHKGTLCSAWNYSSTRLATASSDGTLVIFDSPHPSSSSTSFTPTSNFKAHEVAITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK
        MEKAMATF KGTLCSAWN+SS+RLATASSDGTL                      AHE AITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPL+WK
Subjt:  MEKAMATFHKGTLCSAWNYSSTRLATASSDGTLVIFDSPHPSSSSTSFTPTSNFKAHEVAITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK

Query:  LCKLFKSNSSQILDLQFGNSSSGLKMIAAFSDGYIKVYELMDPLNLKNWQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGEQQSSFVLAFSSNTPQLN
        LCKLFKSNSSQILDLQFGNSSSGLKMIAAFSDGYIKVYELMDPL+LK+WQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGEQQSSFVLAFSSNTPQLN
Subjt:  LCKLFKSNSSQILDLQFGNSSSGLKMIAAFSDGYIKVYELMDPLNLKNWQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGEQQSSFVLAFSSNTPQLN

Query:  SAKVWEFDQAHHRWLPVAELALTAEKGDEVYAVAWAQNIGRPYEVIAVATQRGIAIWHLGLSPDTDGRLSRERVALLSGHNGEVWEMVWDMGGMTLASTG
        SAKVWEFDQAH RWLPVAELALTAEKGDEVYAVAWAQNIGRPYEVIAVATQRGIAIW LGLSPDTDGRLS ERVALLSGHNGEVWEM WDMGGMTLASTG
Subjt:  SAKVWEFDQAHHRWLPVAELALTAEKGDEVYAVAWAQNIGRPYEVIAVATQRGIAIWHLGLSPDTDGRLSRERVALLSGHNGEVWEMVWDMGGMTLASTG

Query:  KDGMVRLWQSNLNGVWHQHAAFEPTS
        KDGMVRLWQSNLNGVWHQHAAFEPTS
Subjt:  KDGMVRLWQSNLNGVWHQHAAFEPTS

A0A6J1C5X6 protein SEH17.8e-16789.3Show/hide
Query:  MEKAMATFHKGTLCSAWNYSSTRLATASSDGTLVIFDSPHPSSSSTSFTPTSNFKAHEVAITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK
        ME AMA+F KGTLCSAWNYS++RLATAS DGTLVIFDSP PSSSSTS T TSNFKAHE AI KIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK
Subjt:  MEKAMATFHKGTLCSAWNYSSTRLATASSDGTLVIFDSPHPSSSSTSFTPTSNFKAHEVAITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK

Query:  LCKLFKSNSSQILDLQFGNSSSGLKMIAAFSDGYIKVYELMDPLNLKNWQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGE-QQSSFVLAFSSNTPQL
        LCK FKSNS+Q+LD+QFGNSSSGLKMIAAFS  ++KVYELMDPL+LKNWQLQAEFQNVIDSISTVRK+SC SASISWNPHRGE QQSSFVLA +SNTPQL
Subjt:  LCKLFKSNSSQILDLQFGNSSSGLKMIAAFSDGYIKVYELMDPLNLKNWQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGE-QQSSFVLAFSSNTPQL

Query:  NSAKVWEFDQAHHRWLPVAELALTAEKGDEVYAVAWAQNIGRPYEVIAVATQRGIAIWHLGLSPDTDGRLSRERVALLSGHNGEVWEMVWDMGGMTLAST
        NSAKVWEFDQAH RWLPVAELAL A+KGDEVYAVAWAQNIGRPYEVIAVATQ+GIAIWHLG +PD DGRLS ERVALLSGHNGEVWEM WDMGGMTLAST
Subjt:  NSAKVWEFDQAHHRWLPVAELALTAEKGDEVYAVAWAQNIGRPYEVIAVATQRGIAIWHLGLSPDTDGRLSRERVALLSGHNGEVWEMVWDMGGMTLAST

Query:  GKDGMVRLWQSNLNGVWHQHAAFEPTS
        GKDGMVRLWQSNLNGVWHQ AAFEPTS
Subjt:  GKDGMVRLWQSNLNGVWHQHAAFEPTS

A0A6J1FTY0 protein SEH16.9e-16386.85Show/hide
Query:  MEKAMATFHKGTLCSAWNYSSTRLATASSDGTLVIFDSPHPSSSSTSFTPTSNFKAHEVAITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK
        MEKAMATF KGT+CSAWNYS++RL T S+DGT+VIFDS  PSSSSTS T TSNFKAHE AI KIVWVPPEYGDS+ACICSDG+SSLWEEVVEDAQPLQWK
Subjt:  MEKAMATFHKGTLCSAWNYSSTRLATASSDGTLVIFDSPHPSSSSTSFTPTSNFKAHEVAITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK

Query:  LCKLFKSNSSQILDLQFGNSSSGLKMIAAFSDGYIKVYELMDPLNLKNWQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGE-QQSSFVLAFSSNTPQL
        L K FKSNSSQI+D+QFGNSSSGLKMIAAFSDG +KVYELMDPL+LK+WQLQAEFQNVIDSISTVRK++C SASISWNP+RGE QQSSFVLAF S+TPQL
Subjt:  LCKLFKSNSSQILDLQFGNSSSGLKMIAAFSDGYIKVYELMDPLNLKNWQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGE-QQSSFVLAFSSNTPQL

Query:  NSAKVWEFDQAHHRWLPVAELALTAEKGDEVYAVAWAQNIGRPYEVIAVATQRGIAIWHLGLSPDTDGRLSRERVALLSGHNGEVWEMVWDMGGMTLAST
        +SAKVWEFDQAH RWLPVAELAL A+KGD VYAVAWAQNIGRPYEVIAVATQ+GIAIW LGL+PD+DGRLS ERVALLSGHNGEVW+M WDMGGMTLAST
Subjt:  NSAKVWEFDQAHHRWLPVAELALTAEKGDEVYAVAWAQNIGRPYEVIAVATQRGIAIWHLGLSPDTDGRLSRERVALLSGHNGEVWEMVWDMGGMTLAST

Query:  GKDGMVRLWQSNLNGVWHQHAAFEPTS
        GKDGMVRLWQSNLNGVWHQHAAFEPTS
Subjt:  GKDGMVRLWQSNLNGVWHQHAAFEPTS

SwissProt top hitse value%identityAlignment
C1BK83 Nucleoporin SEH13.4e-3428.75Show/hide
Query:  KAMATFHKGTLCS-AWNYSSTRLATASSDGTLVIFDSPHPSSSSTSFTPTSNFKAHEVAITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWKL
        +++A  HK  +   ++++   R+AT SSD ++ ++D     S +  +  T+++K H  ++ ++ W  PE+G  +A    D T+++WEE+V ++   Q  L
Subjt:  KAMATFHKGTLCS-AWNYSSTRLATASSDGTLVIFDSPHPSSSSTSFTPTSNFKAHEVAITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWKL

Query:  CKLFK-----SNSSQILDLQFGNSSSGLKMIAAFSDGYIKVYELMDPLNLKNWQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGEQQSSFVLAFS--S
            K      + + + D++F     GL +    +DG +++YE  D +NL  W LQ E            K SCS   ISWNP      S  +   S  S
Subjt:  CKLFK-----SNSSQILDLQFGNSSSGLKMIAAFSDGYIKVYELMDPLNLKNWQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGEQQSSFVLAFS--S

Query:  NTPQLNSAKVWEFDQAHHRWLPVAELALTAEKGDEVYAVAWAQNIGRPYEVIAVATQRGIAIWHL-----GLSPDTDGRLSRERVALLSGHNGEVWEMVW
        NT      +++E+ +   ++  V  L       D V+ +A+A N+GR + V+A+AT + + I+ L       S     +L  +  A   GHN +VW + W
Subjt:  NTPQLNSAKVWEFDQAHHRWLPVAELALTAEKGDEVYAVAWAQNIGRPYEVIAVATQRGIAIWHL-----GLSPDTDGRLSRERVALLSGHNGEVWEMVW

Query:  DMGGMTLASTGKDGMVRLWQSNLNGVW
        ++    LAS+G DG VRLW++N    W
Subjt:  DMGGMTLASTGKDGMVRLWQSNLNGVW

Q4FZW5 Nucleoporin SEH1-A1.1e-3226.91Show/hide
Query:  KAMATFHKGTLCS-AWNYSSTRLATASSDGTLVIFDSPHPSSSSTSFTPTSNFKAHEVAITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQ-----P
        +++A  HK  +   ++++   R+AT SSD ++ ++D     S + ++  T+++K H  ++ ++ W  PE+G  +A    D T+++WEE+V ++       
Subjt:  KAMATFHKGTLCS-AWNYSSTRLATASSDGTLVIFDSPHPSSSSTSFTPTSNFKAHEVAITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQ-----P

Query:  LQWKLCKLFKSNSSQILDLQFGNSSSGLKMIAAFSDGYIKVYELMDPLNLKNWQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGEQQSSFVLAFSSNT
          W        + + + D++F     GL +    +DG +++YE  D +NL  W LQ E            K SCS   ISWNP      S  +   S ++
Subjt:  LQWKLCKLFKSNSSQILDLQFGNSSSGLKMIAAFSDGYIKVYELMDPLNLKNWQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGEQQSSFVLAFSSNT

Query:  PQ--LNSAKVWEFDQAHHRWLPVAELALTAEKGDEVYAVAWAQNIGRPYEVIAVATQ--RGIAIWHLGLSPDTDGRLSR---ERVALLSGHNGEVWEMVW
            +   +++E+++   ++   A+        D V+ +A+A N+GR + ++AVAT+  R   +  L     + G +++     VA    HN +VW + W
Subjt:  PQ--LNSAKVWEFDQAHHRWLPVAELALTAEKGDEVYAVAWAQNIGRPYEVIAVATQ--RGIAIWHLGLSPDTDGRLSR---ERVALLSGHNGEVWEMVW

Query:  DMGGMTLASTGKDGMVRLWQSNLNGVW
        ++ G  LAS+G DG VRLW++N    W
Subjt:  DMGGMTLASTGKDGMVRLWQSNLNGVW

Q6GNF1 Nucleoporin SEH1-B6.4e-3326.91Show/hide
Query:  KAMATFHKGTLCS-AWNYSSTRLATASSDGTLVIFDSPHPSSSSTSFTPTSNFKAHEVAITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQ-----P
        +++A  HK  +   ++++   R+AT SSD ++ ++D     S + ++  T+++K H  ++ ++ W  PE+G  +A    D T+++WEE+V ++       
Subjt:  KAMATFHKGTLCS-AWNYSSTRLATASSDGTLVIFDSPHPSSSSTSFTPTSNFKAHEVAITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQ-----P

Query:  LQWKLCKLFKSNSSQILDLQFGNSSSGLKMIAAFSDGYIKVYELMDPLNLKNWQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGEQQSSFVLAFSSNT
          W        + + + D++F     GL +    +DG +++YE  D +NL  W LQ E            K SCS   ISWNP      S  +   S ++
Subjt:  LQWKLCKLFKSNSSQILDLQFGNSSSGLKMIAAFSDGYIKVYELMDPLNLKNWQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGEQQSSFVLAFSSNT

Query:  PQ--LNSAKVWEFDQAHHRWLPVAELALTAEKGDEVYAVAWAQNIGRPYEVIAVATQ--RGIAIWHLGLSPDTDG---RLSRERVALLSGHNGEVWEMVW
            +   +++E+++   ++   A+        D V+ +A+A N+GR + ++AVAT+  R   +  L     + G   +     VA    HN +VW + W
Subjt:  PQ--LNSAKVWEFDQAHHRWLPVAELALTAEKGDEVYAVAWAQNIGRPYEVIAVATQ--RGIAIWHLGLSPDTDG---RLSRERVALLSGHNGEVWEMVW

Query:  DMGGMTLASTGKDGMVRLWQSNLNGVW
        ++ G  LAS+G DG VRLW++N    W
Subjt:  DMGGMTLASTGKDGMVRLWQSNLNGVW

Q93VR9 Protein SEH11.8e-12363.69Show/hide
Query:  MEKAMATFHKGTLCSAWNYSSTRLATASSDGTLVIFDSPHPSSSSTSFTPTSNFKAHEVAITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK
        M K+MAT   GT CS+WN S  RLA  S +G L I++S   +SSS++F+ TS  +  E +I KIVW+P EYGD+VAC+C DG+ S+WEE+ EDA  L+WK
Subjt:  MEKAMATFHKGTLCSAWNYSSTRLATASSDGTLVIFDSPHPSSSSTSFTPTSNFKAHEVAITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK

Query:  LCKLFKSNSSQILDLQFGNSSSGLKMIAAFSDGYIKVYELMDPLNLKNWQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGEQQS-SFVLAFSSNTPQL
        LCK  K+ SSQ+LD+QFG S   LKM+AA+SDGY++V+EL++PL LKNWQLQAEFQNVIDS+ST+ K S  SAS+SWNP +GE+Q  SFVLAF+S++P L
Subjt:  LCKLFKSNSSQILDLQFGNSSSGLKMIAAFSDGYIKVYELMDPLNLKNWQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGEQQS-SFVLAFSSNTPQL

Query:  NSAKVWEFDQAHHRWLPVAELALTAEKGDEVYAVAWAQNIGRPYEVIAVATQRGIAIWHLGLSPDTDGRLSRERVALLSGHNGEVWEMVWDMGGMTLAST
        NS+K+WEFD+AH+RWL VAELAL  +KGD VYA++WA NIGRPYEV+AVAT +GI IWH+GL+PD +GRL  ++V+ LSGH GEVW+M WDM GMTLAST
Subjt:  NSAKVWEFDQAHHRWLPVAELALTAEKGDEVYAVAWAQNIGRPYEVIAVATQRGIAIWHLGLSPDTDGRLSRERVALLSGHNGEVWEMVWDMGGMTLAST

Query:  GKDGMVRLWQSNLNGVWHQHAAFEP
        G DGMV+LWQSNLNG WH+ A  EP
Subjt:  GKDGMVRLWQSNLNGVWHQHAAFEP

Q96EE3 Nucleoporin SEH11.1e-3228.75Show/hide
Query:  KAMATFHKGTLCS-AWNYSSTRLATASSDGTLVIFDSPHPSSSSTSFTPTSNFKAHEVAITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQ-----P
        +++A  HK  +   ++++   R+AT SSD ++ ++D     S S  +  T+++K H  ++ ++ W  PE+G  +A    D T+++WEE+V ++       
Subjt:  KAMATFHKGTLCS-AWNYSSTRLATASSDGTLVIFDSPHPSSSSTSFTPTSNFKAHEVAITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQ-----P

Query:  LQWKLCKLFKSNSSQILDLQFGNSSSGLKMIAAFSDGYIKVYELMDPLNLKNWQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGEQQSSFVLAFSSNT
          W        + + + D++F     GL +    +DG +++YE  D +NL  W LQ E            K SCS   ISWNP      S  +   S ++
Subjt:  LQWKLCKLFKSNSSQILDLQFGNSSSGLKMIAAFSDGYIKVYELMDPLNLKNWQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGEQQSSFVLAFSSNT

Query:  PQLNSAKVWEFD-QAHHRWLPVAELALTAEKGDEVYAVAWAQNIGRPYEVIAVATQRGIAIWHLG------LSPDTDGRLSRERVALLSGHNGEVWEMVW
             AKV  F+   + R    AE  +T    D V+ +A+A N+GR + ++A+AT + + I+ L        S     +     VA    HN +VW + W
Subjt:  PQLNSAKVWEFD-QAHHRWLPVAELALTAEKGDEVYAVAWAQNIGRPYEVIAVATQRGIAIWHLG------LSPDTDGRLSRERVALLSGHNGEVWEMVW

Query:  DMGGMTLASTGKDGMVRLWQSNLNGVW
        ++ G  LAS+G DG VRLW++N    W
Subjt:  DMGGMTLASTGKDGMVRLWQSNLNGVW

Arabidopsis top hitse value%identityAlignment
AT1G64350.1 Transducin/WD40 repeat-like superfamily protein1.3e-12463.69Show/hide
Query:  MEKAMATFHKGTLCSAWNYSSTRLATASSDGTLVIFDSPHPSSSSTSFTPTSNFKAHEVAITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK
        M K+MAT   GT CS+WN S  RLA  S +G L I++S   +SSS++F+ TS  +  E +I KIVW+P EYGD+VAC+C DG+ S+WEE+ EDA  L+WK
Subjt:  MEKAMATFHKGTLCSAWNYSSTRLATASSDGTLVIFDSPHPSSSSTSFTPTSNFKAHEVAITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWK

Query:  LCKLFKSNSSQILDLQFGNSSSGLKMIAAFSDGYIKVYELMDPLNLKNWQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGEQQS-SFVLAFSSNTPQL
        LCK  K+ SSQ+LD+QFG S   LKM+AA+SDGY++V+EL++PL LKNWQLQAEFQNVIDS+ST+ K S  SAS+SWNP +GE+Q  SFVLAF+S++P L
Subjt:  LCKLFKSNSSQILDLQFGNSSSGLKMIAAFSDGYIKVYELMDPLNLKNWQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGEQQS-SFVLAFSSNTPQL

Query:  NSAKVWEFDQAHHRWLPVAELALTAEKGDEVYAVAWAQNIGRPYEVIAVATQRGIAIWHLGLSPDTDGRLSRERVALLSGHNGEVWEMVWDMGGMTLAST
        NS+K+WEFD+AH+RWL VAELAL  +KGD VYA++WA NIGRPYEV+AVAT +GI IWH+GL+PD +GRL  ++V+ LSGH GEVW+M WDM GMTLAST
Subjt:  NSAKVWEFDQAHHRWLPVAELALTAEKGDEVYAVAWAQNIGRPYEVIAVATQRGIAIWHLGLSPDTDGRLSRERVALLSGHNGEVWEMVWDMGGMTLAST

Query:  GKDGMVRLWQSNLNGVWHQHAAFEP
        G DGMV+LWQSNLNG WH+ A  EP
Subjt:  GKDGMVRLWQSNLNGVWHQHAAFEP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGGCTATGGCGACCTTTCACAAAGGCACTCTCTGTTCAGCTTGGAACTACTCCTCCACCAGATTAGCCACCGCTTCTTCCGACGGAACCCTCGTCATCTTTGA
TTCTCCCCACCCTTCTTCTTCCTCCACCTCCTTTACTCCCACCTCAAACTTCAAGGCGCACGAGGTTGCAATTACCAAGATTGTTTGGGTACCTCCGGAGTATGGTGATT
CTGTTGCGTGCATATGTTCAGATGGAACTTCATCATTGTGGGAGGAGGTTGTTGAAGATGCCCAGCCCCTACAGTGGAAGCTATGCAAACTCTTCAAAAGTAATTCATCT
CAAATCCTAGACTTGCAATTTGGAAATTCCTCCTCTGGTCTGAAAATGATTGCTGCATTTTCAGATGGTTATATAAAAGTTTATGAGCTTATGGATCCTTTGAATTTGAA
GAACTGGCAACTTCAGGCTGAATTTCAGAATGTTATTGATTCCATTTCTACAGTCAGGAAATCTTCTTGTTCATCTGCAAGTATATCATGGAATCCTCATCGAGGGGAGC
AGCAATCAAGCTTTGTTCTTGCTTTTAGTTCCAATACACCGCAGCTTAATTCGGCCAAGGTTTGGGAATTTGATCAGGCTCATCACAGATGGCTTCCTGTGGCAGAGTTG
GCTTTGACTGCTGAGAAAGGTGATGAGGTTTATGCTGTCGCGTGGGCACAAAATATTGGAAGGCCATATGAGGTAATAGCTGTTGCAACCCAGAGAGGAATTGCAATATG
GCATCTTGGATTAAGCCCCGACACGGATGGAAGGCTCTCAAGAGAAAGAGTTGCTCTGCTTTCTGGGCATAATGGCGAGGTGTGGGAGATGGTGTGGGACATGGGTGGTA
TGACATTAGCATCAACAGGAAAGGACGGGATGGTACGGTTGTGGCAATCCAACCTCAATGGTGTTTGGCACCAACATGCTGCATTTGAGCCGACTTCTTAA
mRNA sequenceShow/hide mRNA sequence
AAAAGAAGAATGCGGCACTAAACCCTGAAGTAAGAAGGAGAAGTGCGATTTTTGTAGCAGGTGAAGGCGCGAACAAAGAATTGAGAGTTTCCACAATGGAGAAGGCTATG
GCGACCTTTCACAAAGGCACTCTCTGTTCAGCTTGGAACTACTCCTCCACCAGATTAGCCACCGCTTCTTCCGACGGAACCCTCGTCATCTTTGATTCTCCCCACCCTTC
TTCTTCCTCCACCTCCTTTACTCCCACCTCAAACTTCAAGGCGCACGAGGTTGCAATTACCAAGATTGTTTGGGTACCTCCGGAGTATGGTGATTCTGTTGCGTGCATAT
GTTCAGATGGAACTTCATCATTGTGGGAGGAGGTTGTTGAAGATGCCCAGCCCCTACAGTGGAAGCTATGCAAACTCTTCAAAAGTAATTCATCTCAAATCCTAGACTTG
CAATTTGGAAATTCCTCCTCTGGTCTGAAAATGATTGCTGCATTTTCAGATGGTTATATAAAAGTTTATGAGCTTATGGATCCTTTGAATTTGAAGAACTGGCAACTTCA
GGCTGAATTTCAGAATGTTATTGATTCCATTTCTACAGTCAGGAAATCTTCTTGTTCATCTGCAAGTATATCATGGAATCCTCATCGAGGGGAGCAGCAATCAAGCTTTG
TTCTTGCTTTTAGTTCCAATACACCGCAGCTTAATTCGGCCAAGGTTTGGGAATTTGATCAGGCTCATCACAGATGGCTTCCTGTGGCAGAGTTGGCTTTGACTGCTGAG
AAAGGTGATGAGGTTTATGCTGTCGCGTGGGCACAAAATATTGGAAGGCCATATGAGGTAATAGCTGTTGCAACCCAGAGAGGAATTGCAATATGGCATCTTGGATTAAG
CCCCGACACGGATGGAAGGCTCTCAAGAGAAAGAGTTGCTCTGCTTTCTGGGCATAATGGCGAGGTGTGGGAGATGGTGTGGGACATGGGTGGTATGACATTAGCATCAA
CAGGAAAGGACGGGATGGTACGGTTGTGGCAATCCAACCTCAATGGTGTTTGGCACCAACATGCTGCATTTGAGCCGACTTCTTAAAATTGAGAATGTTTTGTTTCTTTT
TGATGTAACCACTTCCTGTATTCAATTTAAGGAAGAACTTCGAAATAATATTATTTGTCTTGTTGAGTGGGGGGCTAATGTCAGGGATACCTTATTGGAGACCCTTGGGG
AAAATCAACTGTCATTGATGCTTTTATTTCTCCAAATTGCTTTTGCTGAGTTGAGACTTGTGTTGCTAAAGTATGTATTTCACGCTGACAAGAAGAAAGAATAAAACTGC
ACTTGAATTAGAGTTTGAGAATCCGAAGGAAAATGAGTATGAGTTTAAAACTAAGGACAATATAGTAT
Protein sequenceShow/hide protein sequence
MEKAMATFHKGTLCSAWNYSSTRLATASSDGTLVIFDSPHPSSSSTSFTPTSNFKAHEVAITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWKLCKLFKSNSS
QILDLQFGNSSSGLKMIAAFSDGYIKVYELMDPLNLKNWQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGEQQSSFVLAFSSNTPQLNSAKVWEFDQAHHRWLPVAEL
ALTAEKGDEVYAVAWAQNIGRPYEVIAVATQRGIAIWHLGLSPDTDGRLSRERVALLSGHNGEVWEMVWDMGGMTLASTGKDGMVRLWQSNLNGVWHQHAAFEPTS