CuGenDBv2

Gene ID	CSPI04G06530
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Dihydroxy-acid dehydratase
Genome location	Chr4:4534299..4535231
RNA-Seq Expression	CSPI04G06530
Synteny	CSPI04G06530
Gene Ontology terms	NA
InterPro domains	IPR025322 - Protein of unknown function DUF4228, plant

Homology

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GenBank top hits

e value

%identity

Alignment

KAE8649212.1 hypothetical protein Csa_014712 [Cucumis sativus]

2.7e-111

99.5

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Query:  MSSAINEVEEKALKIAMGNCSLKGMAVDCEKPIRILTDSGHIINFHGPKQVHQILNNYPPGIYGVFRRPNLSSPLPISEPLDAGKSYFLLPLSQSTNDGE
        MSSAINEVEEKALKIAMGNCSLKGMAVDCEKPIRILTDSGHIINFHGPKQVHQILNNYPPGIYGVFRRPNLSSPLP+SEPLDAGKSYFLLPLSQSTNDGE
Subjt:  MSSAINEVEEKALKIAMGNCSLKGMAVDCEKPIRILTDSGHIINFHGPKQVHQILNNYPPGIYGVFRRPNLSSPLPISEPLDAGKSYFLLPLSQSTNDGE

Query:  SPLPVPPPSKDVGSESGLEVLPAGGNGVWRVKLVIDTKQLGEILAEEGNTEALIERMRAAAATAAVQSPRRGKIGGWKPMWGNWFKFFPIDVGNSNKAQM
        SPLPVPPPSKDVGSESGLEVLPAGGNGVWRVKLVIDTKQLGEILAEEGNTEALIERMRAAAATAAVQSPRRGKIGGWKPMWGNWFKFFPIDVGNSNKAQM
Subjt:  SPLPVPPPSKDVGSESGLEVLPAGGNGVWRVKLVIDTKQLGEILAEEGNTEALIERMRAAAATAAVQSPRRGKIGGWKPMWGNWFKFFPIDVGNSNKAQM

Query:  K
        K
Subjt:  K

XP_008451927.1 PREDICTED: uncharacterized protein LOC103493080 [Cucumis melo]

2.6e-93

91.01

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Query:  MGNCSLKGMAVDCEKPIRILTDSGHIINFHGPKQVHQILNNYPPGIYGVFRRPNLSSPLPISEPLDAGKSYFLLPLSQSTNDGESPLPVPPPSKDVGSES
        MGNCSLKGMAVDC KPIRILTDSGHIINFHGPKQVHQILNNYPPGIYGVFRRPNLSSPLP SEPLDAGKSYFLLPLSQ TND ES  P P PSKD+GSES
Subjt:  MGNCSLKGMAVDCEKPIRILTDSGHIINFHGPKQVHQILNNYPPGIYGVFRRPNLSSPLPISEPLDAGKSYFLLPLSQSTNDGESPLPVPPPSKDVGSES

Query:  GLEVLPAGGNGVWRVKLVIDTKQLGEILAEEGNTEALIERMRAAAATAAVQSPRRGKIGGWKPMWGNWFKFFPIDVGNSNKAQMKEFNS
        GLEVLPA GNGVWRVKLVIDTKQLGEILAEEGNTEALIER+RAAAATAAVQSPRRGKI GWKPMWGNW KFFP+D GN+NKAQ+KEFNS
Subjt:  GLEVLPAGGNGVWRVKLVIDTKQLGEILAEEGNTEALIERMRAAAATAAVQSPRRGKIGGWKPMWGNWFKFFPIDVGNSNKAQMKEFNS

XP_011653223.1 uncharacterized protein LOC105435189 [Cucumis sativus]

1.9e-112

99.02

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Query:  MSSAINEVEEKALKIAMGNCSLKGMAVDCEKPIRILTDSGHIINFHGPKQVHQILNNYPPGIYGVFRRPNLSSPLPISEPLDAGKSYFLLPLSQSTNDGE
        MSSAINEVEEKALKIAMGNCSLKGMAVDCEKPIRILTDSGHIINFHGPKQVHQILNNYPPGIYGVFRRPNLSSPLP+SEPLDAGKSYFLLPLSQSTNDGE
Subjt:  MSSAINEVEEKALKIAMGNCSLKGMAVDCEKPIRILTDSGHIINFHGPKQVHQILNNYPPGIYGVFRRPNLSSPLPISEPLDAGKSYFLLPLSQSTNDGE

Query:  SPLPVPPPSKDVGSESGLEVLPAGGNGVWRVKLVIDTKQLGEILAEEGNTEALIERMRAAAATAAVQSPRRGKIGGWKPMWGNWFKFFPIDVGNSNKAQM
        SPLPVPPPSKDVGSESGLEVLPAGGNGVWRVKLVIDTKQLGEILAEEGNTEALIERMRAAAATAAVQSPRRGKIGGWKPMWGNWFKFFPIDVGNSNKAQM
Subjt:  SPLPVPPPSKDVGSESGLEVLPAGGNGVWRVKLVIDTKQLGEILAEEGNTEALIERMRAAAATAAVQSPRRGKIGGWKPMWGNWFKFFPIDVGNSNKAQM

Query:  KEFN
        K FN
Subjt:  KEFN

XP_022985422.1 uncharacterized protein LOC111483432 [Cucurbita maxima]

5.9e-82

80.95

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Query:  MGNCSLKGMAVDCEKPIRILTDSGHIINFHGPKQVHQILNNYPPGIYGVFRRPNLSSPLPISEPLDAGKSYFLLPLSQSTNDGESPLPVPPPSKDVGSES
        MGNCSLKG+A DCEKPIRILTDSG+IINFHGPKQV QIL NYPPG+YGVFRRPNLSSPLPISEPLDAGKSYFLLPLS++     S       + D+ + S
Subjt:  MGNCSLKGMAVDCEKPIRILTDSGHIINFHGPKQVHQILNNYPPGIYGVFRRPNLSSPLPISEPLDAGKSYFLLPLSQSTNDGESPLPVPPPSKDVGSES

Query:  GLEVLPAGGNGVWRVKLVIDTKQLGEILAEEGNTEALIERMRAAAATAAVQSPRRGKIGGWKPMWGNWFKFFPIDVGNSNKAQMKEFNS
        GLEVLP GG+G+WRVKLVIDTKQLGEILAE+GNTEALIERMRAAAATAAVQSPRR KIGGWKP WGNW KFFPIDVGN+NKAQMK+F+S
Subjt:  GLEVLPAGGNGVWRVKLVIDTKQLGEILAEEGNTEALIERMRAAAATAAVQSPRRGKIGGWKPMWGNWFKFFPIDVGNSNKAQMKEFNS

XP_038907067.1 uncharacterized protein LOC120092893 [Benincasa hispida]

7.0e-83

81.44

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Query:  MGNCSLKGMAVDCEKPIRILTDSGHIINFHGPKQVHQILNNYPPGIYGVFRRPNLSSPLPISEPLDAGKSYFLLPLSQ-----STNDGESPLPVPPPSKD
        MGNCSLKGM VDCEKPIRILTDSG+IINFHGPKQVHQILNNYPPG+YGVFRRPNLSSPLPISEPLDAGKSYFLLPLS+       +DGE     PPP K+
Subjt:  MGNCSLKGMAVDCEKPIRILTDSGHIINFHGPKQVHQILNNYPPGIYGVFRRPNLSSPLPISEPLDAGKSYFLLPLSQ-----STNDGESPLPVPPPSKD

Query:  VGSESGLEVLPAGGNGVWRVKLVIDTKQLGEILAEEGNTEALIERMRAAAATAAVQSPRRGKIGGWKPMWGNWFKFFPIDVGNSNKAQMKEFNS
        +GS SGLEVLPAGGNGVWRVKLVIDTKQLGEILAEEGNTEALIERMRAAAA    +SP+RGKIGGWK  WGN  KFFPIDVGN+NKAQ+K+F++
Subjt:  VGSESGLEVLPAGGNGVWRVKLVIDTKQLGEILAEEGNTEALIERMRAAAATAAVQSPRRGKIGGWKPMWGNWFKFFPIDVGNSNKAQMKEFNS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KYF7 Uncharacterized protein

9.2e-113

99.02

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Query:  MSSAINEVEEKALKIAMGNCSLKGMAVDCEKPIRILTDSGHIINFHGPKQVHQILNNYPPGIYGVFRRPNLSSPLPISEPLDAGKSYFLLPLSQSTNDGE
        MSSAINEVEEKALKIAMGNCSLKGMAVDCEKPIRILTDSGHIINFHGPKQVHQILNNYPPGIYGVFRRPNLSSPLP+SEPLDAGKSYFLLPLSQSTNDGE
Subjt:  MSSAINEVEEKALKIAMGNCSLKGMAVDCEKPIRILTDSGHIINFHGPKQVHQILNNYPPGIYGVFRRPNLSSPLPISEPLDAGKSYFLLPLSQSTNDGE

Query:  SPLPVPPPSKDVGSESGLEVLPAGGNGVWRVKLVIDTKQLGEILAEEGNTEALIERMRAAAATAAVQSPRRGKIGGWKPMWGNWFKFFPIDVGNSNKAQM
        SPLPVPPPSKDVGSESGLEVLPAGGNGVWRVKLVIDTKQLGEILAEEGNTEALIERMRAAAATAAVQSPRRGKIGGWKPMWGNWFKFFPIDVGNSNKAQM
Subjt:  SPLPVPPPSKDVGSESGLEVLPAGGNGVWRVKLVIDTKQLGEILAEEGNTEALIERMRAAAATAAVQSPRRGKIGGWKPMWGNWFKFFPIDVGNSNKAQM

Query:  KEFN
        K FN
Subjt:  KEFN

A0A1S3BTS2 uncharacterized protein LOC103493080

1.2e-93

91.01

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Query:  MGNCSLKGMAVDCEKPIRILTDSGHIINFHGPKQVHQILNNYPPGIYGVFRRPNLSSPLPISEPLDAGKSYFLLPLSQSTNDGESPLPVPPPSKDVGSES
        MGNCSLKGMAVDC KPIRILTDSGHIINFHGPKQVHQILNNYPPGIYGVFRRPNLSSPLP SEPLDAGKSYFLLPLSQ TND ES  P P PSKD+GSES
Subjt:  MGNCSLKGMAVDCEKPIRILTDSGHIINFHGPKQVHQILNNYPPGIYGVFRRPNLSSPLPISEPLDAGKSYFLLPLSQSTNDGESPLPVPPPSKDVGSES

Query:  GLEVLPAGGNGVWRVKLVIDTKQLGEILAEEGNTEALIERMRAAAATAAVQSPRRGKIGGWKPMWGNWFKFFPIDVGNSNKAQMKEFNS
        GLEVLPA GNGVWRVKLVIDTKQLGEILAEEGNTEALIER+RAAAATAAVQSPRRGKI GWKPMWGNW KFFP+D GN+NKAQ+KEFNS
Subjt:  GLEVLPAGGNGVWRVKLVIDTKQLGEILAEEGNTEALIERMRAAAATAAVQSPRRGKIGGWKPMWGNWFKFFPIDVGNSNKAQMKEFNS

A0A5A7TTS6 Uncharacterized protein

1.2e-93

91.01

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Query:  MGNCSLKGMAVDCEKPIRILTDSGHIINFHGPKQVHQILNNYPPGIYGVFRRPNLSSPLPISEPLDAGKSYFLLPLSQSTNDGESPLPVPPPSKDVGSES
        MGNCSLKGMAVDC KPIRILTDSGHIINFHGPKQVHQILNNYPPGIYGVFRRPNLSSPLP SEPLDAGKSYFLLPLSQ TND ES  P P PSKD+GSES
Subjt:  MGNCSLKGMAVDCEKPIRILTDSGHIINFHGPKQVHQILNNYPPGIYGVFRRPNLSSPLPISEPLDAGKSYFLLPLSQSTNDGESPLPVPPPSKDVGSES

Query:  GLEVLPAGGNGVWRVKLVIDTKQLGEILAEEGNTEALIERMRAAAATAAVQSPRRGKIGGWKPMWGNWFKFFPIDVGNSNKAQMKEFNS
        GLEVLPA GNGVWRVKLVIDTKQLGEILAEEGNTEALIER+RAAAATAAVQSPRRGKI GWKPMWGNW KFFP+D GN+NKAQ+KEFNS
Subjt:  GLEVLPAGGNGVWRVKLVIDTKQLGEILAEEGNTEALIERMRAAAATAAVQSPRRGKIGGWKPMWGNWFKFFPIDVGNSNKAQMKEFNS

A0A6J1EZE8 uncharacterized protein LOC111437614

5.4e-81

80.42

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Query:  MGNCSLKGMAVDCEKPIRILTDSGHIINFHGPKQVHQILNNYPPGIYGVFRRPNLSSPLPISEPLDAGKSYFLLPLSQSTNDGESPLPVPPPSKDVGSES
        MGNCSLKG+A DCEKPIRILTDSG+IINFHGPKQV QIL NYPPG+YGVFRRPNLSSPLPISE LDAGKSYFLLPLS++     S       ++D+ S S
Subjt:  MGNCSLKGMAVDCEKPIRILTDSGHIINFHGPKQVHQILNNYPPGIYGVFRRPNLSSPLPISEPLDAGKSYFLLPLSQSTNDGESPLPVPPPSKDVGSES

Query:  GLEVLPAGGNGVWRVKLVIDTKQLGEILAEEGNTEALIERMRAAAATAAVQSPRRGKIGGWKPMWGNWFKFFPIDVGNSNKAQMKEFNS
        GLEVLP GG+G+WRVKLVIDTKQLGEILAEEGNTEALIERMRAAAATAAVQSPRR KIGGWKP WGNW KF PIDVGN+NKAQ+K+F+S
Subjt:  GLEVLPAGGNGVWRVKLVIDTKQLGEILAEEGNTEALIERMRAAAATAAVQSPRRGKIGGWKPMWGNWFKFFPIDVGNSNKAQMKEFNS

A0A6J1J4V0 uncharacterized protein LOC111483432

2.9e-82

80.95

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Query:  MGNCSLKGMAVDCEKPIRILTDSGHIINFHGPKQVHQILNNYPPGIYGVFRRPNLSSPLPISEPLDAGKSYFLLPLSQSTNDGESPLPVPPPSKDVGSES
        MGNCSLKG+A DCEKPIRILTDSG+IINFHGPKQV QIL NYPPG+YGVFRRPNLSSPLPISEPLDAGKSYFLLPLS++     S       + D+ + S
Subjt:  MGNCSLKGMAVDCEKPIRILTDSGHIINFHGPKQVHQILNNYPPGIYGVFRRPNLSSPLPISEPLDAGKSYFLLPLSQSTNDGESPLPVPPPSKDVGSES

Query:  GLEVLPAGGNGVWRVKLVIDTKQLGEILAEEGNTEALIERMRAAAATAAVQSPRRGKIGGWKPMWGNWFKFFPIDVGNSNKAQMKEFNS
        GLEVLP GG+G+WRVKLVIDTKQLGEILAE+GNTEALIERMRAAAATAAVQSPRR KIGGWKP WGNW KFFPIDVGN+NKAQMK+F+S
Subjt:  GLEVLPAGGNGVWRVKLVIDTKQLGEILAEEGNTEALIERMRAAAATAAVQSPRRGKIGGWKPMWGNWFKFFPIDVGNSNKAQMKEFNS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G10120.1 unknown protein

1.6e-05

29.03

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Query:  MGNCSLKGMAVDCEKPIRILTDSGHIINFHGPKQVHQILNNYPPGIYGVFRRPNLSSPLPISEPLDAGKSYFLLPLSQSTND--------GESPLPVPPP
        MGNC      V  +K I+I+ + G ++ + GP +VH IL  + P  Y +F     +  L     L  G+ Y+LLP  Q TN          +     P  
Subjt:  MGNCSLKGMAVDCEKPIRILTDSGHIINFHGPKQVHQILNNYPPGIYGVFRRPNLSSPLPISEPLDAGKSYFLLPLSQSTND--------GESPLPVPPP

Query:  SKDVGSESGL----EVLPAGGNGVWRVKLVIDTKQLGEILAEEGNTEALIERMRA
         K+   E  L    +      NGV RVK+V+  ++L E L + G+   ++ R  A
Subjt:  SKDVGSESGL----EVLPAGGNGVWRVKLVIDTKQLGEILAEEGNTEALIERMRA

AT3G61920.1 unknown protein

1.9e-14

35.67

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Query:  MGNCSLKG------MAVDCEKPIRILTDSGHIINFHGPKQVHQILNNYPPG-IYGVFRRPNLSSPLPISEPLDAGKSYFLLPLSQSTN-----DGESPLP
        MGNC  KG      +    +  I+++T +G ++  H P     I N +P   I+      + S PL   E L  G  Y+LLPLS S       D    L 
Subjt:  MGNCSLKG------MAVDCEKPIRILTDSGHIINFHGPKQVHQILNNYPPG-IYGVFRRPNLSSPLPISEPLDAGKSYFLLPLSQSTN-----DGESPLP

Query:  VPPPSKDVGSESGLEVLPAGGNGVWRVKLVIDTKQLGEILAEEGNTEALIERMRAAA
          P     G    +  L  GG GVW+V+LVI  +QL EILAE+  TEAL+E +R  A
Subjt:  VPPPSKDVGSESGLEVLPAGGNGVWRVKLVIDTKQLGEILAEEGNTEALIERMRAAA

AT4G10910.1 unknown protein

4.2e-09

58.82

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Query:  LEVLPAGGNGVWRVKLVIDTKQLGEILAEEGNTEALIERMRAAAATAAVQS
        ++V P   NGVW+ K+VI +KQL EILA EGNT ALI+++R AAA A V S
Subjt:  LEVLPAGGNGVWRVKLVIDTKQLGEILAEEGNTEALIERMRAAAATAAVQS

Sequences

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CDS sequence

Show/hide CDS sequence

ATGAGCTCCGCCATTAACGAGGTGGAAGAAAAAGCTTTGAAAATCGCAATGGGAAACTGTTCTCTCAAAGGAATGGCGGTGGATTGCGAGAAGCCCATCAGAATCTTAAC
GGATTCCGGCCACATAATCAACTTCCACGGCCCTAAACAAGTTCATCAAATCCTCAACAACTATCCTCCCGGCATCTATGGCGTTTTCCGGCGACCCAATCTATCTTCTC
CCTTACCCATCTCCGAGCCCCTTGACGCCGGAAAATCCTACTTTCTTCTCCCGCTTTCCCAATCCACTAACGACGGAGAGTCACCGCTGCCGGTGCCGCCGCCGTCGAAG
GATGTGGGAAGTGAGTCGGGTCTGGAAGTGCTCCCGGCGGGTGGCAACGGCGTTTGGAGGGTGAAATTGGTGATCGATACGAAGCAGTTGGGGGAAATTTTGGCGGAGGA
AGGGAATACGGAGGCGTTGATTGAGAGGATGAGAGCGGCAGCGGCGACGGCGGCGGTGCAAAGTCCACGGCGGGGGAAGATCGGAGGGTGGAAGCCGATGTGGGGGAATT
GGTTCAAATTTTTTCCAATTGACGTTGGAAATAGTAATAAAGCACAAATGAAAGAATTTAATTCTTGA

mRNA sequence

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AAAATTTAAAAAAACAAAGTTCAAATTTTCACTATATATATAAAGAAAAGCCACTGATGAGCTCCGCCATTAACGAGGTGGAAGAAAAAGCTTTGAAAATCGCAATGGGA
AACTGTTCTCTCAAAGGAATGGCGGTGGATTGCGAGAAGCCCATCAGAATCTTAACGGATTCCGGCCACATAATCAACTTCCACGGCCCTAAACAAGTTCATCAAATCCT
CAACAACTATCCTCCCGGCATCTATGGCGTTTTCCGGCGACCCAATCTATCTTCTCCCTTACCCATCTCCGAGCCCCTTGACGCCGGAAAATCCTACTTTCTTCTCCCGC
TTTCCCAATCCACTAACGACGGAGAGTCACCGCTGCCGGTGCCGCCGCCGTCGAAGGATGTGGGAAGTGAGTCGGGTCTGGAAGTGCTCCCGGCGGGTGGCAACGGCGTT
TGGAGGGTGAAATTGGTGATCGATACGAAGCAGTTGGGGGAAATTTTGGCGGAGGAAGGGAATACGGAGGCGTTGATTGAGAGGATGAGAGCGGCAGCGGCGACGGCGGC
GGTGCAAAGTCCACGGCGGGGGAAGATCGGAGGGTGGAAGCCGATGTGGGGGAATTGGTTCAAATTTTTTCCAATTGACGTTGGAAATAGTAATAAAGCACAAATGAAAG
AATTTAATTCTTGAAATGGGTGTTCATATTCAACATAAACCCTAAGTATTTTCTTTCTAATTTGATTATTAGGAGAAAGTTTGTGTAAAATGTAATTTTTGAGCTTGTTT
GGTTGTATATAAGCTTGTATGTAAGGTGTGAGTTTTTAGGGCTCTCTTAATAGAGTTATAAAGTTATTATTATGTTGTGCTCTCAATTTTTTTATTTAATTGAAGACTTT
GTGAAAATATACAAAAGGATAATAATACCAGGGCCCTACCGGGTTCGAACCGG

Protein sequence

Show/hide protein sequence

MSSAINEVEEKALKIAMGNCSLKGMAVDCEKPIRILTDSGHIINFHGPKQVHQILNNYPPGIYGVFRRPNLSSPLPISEPLDAGKSYFLLPLSQSTNDGESPLPVPPPSK
DVGSESGLEVLPAGGNGVWRVKLVIDTKQLGEILAEEGNTEALIERMRAAAATAAVQSPRRGKIGGWKPMWGNWFKFFPIDVGNSNKAQMKEFNS

CSPI04G06530 (gene) of Cucumber (PI 183967) v1 genome