CuGenDBv2

Gene ID	CSPI04G06600
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Protein Ycf2
Genome location	Chr4:4629656..4630063
RNA-Seq Expression	CSPI04G06600
Synteny	CSPI04G06600
Gene Ontology terms	GO:0009570 - chloroplast stroma (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0005524 - ATP binding (molecular function) GO:0016887 - ATPase activity (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

ALF03362.1 Ycf2 [Cucumis sativus var. hardwickii]

1.2e-70

100

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Query:  FLFDCIERPNELGVPYWARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFLINQFIWDPADPLFFLFQDHPFVSVFSHREFFADEEMA
        FLFDCIERPNELGVPYWARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFLINQFIWDPADPLFFLFQDHPFVSVFSHREFFADEEMA
Subjt:  FLFDCIERPNELGVPYWARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFLINQFIWDPADPLFFLFQDHPFVSVFSHREFFADEEMA

Query:  KGLLTSQPAFPTSLEKRWFINIKNTQEKYVE
        KGLLTSQPAFPTSLEKRWFINIKNTQEKYVE
Subjt:  KGLLTSQPAFPTSLEKRWFINIKNTQEKYVE

ASY97525.1 Ycf2 [Cucumis sativus var. hardwickii]

1.2e-70

100

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Query:  FLFDCIERPNELGVPYWARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFLINQFIWDPADPLFFLFQDHPFVSVFSHREFFADEEMA
        FLFDCIERPNELGVPYWARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFLINQFIWDPADPLFFLFQDHPFVSVFSHREFFADEEMA
Subjt:  FLFDCIERPNELGVPYWARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFLINQFIWDPADPLFFLFQDHPFVSVFSHREFFADEEMA

Query:  KGLLTSQPAFPTSLEKRWFINIKNTQEKYVE
        KGLLTSQPAFPTSLEKRWFINIKNTQEKYVE
Subjt:  KGLLTSQPAFPTSLEKRWFINIKNTQEKYVE

Q2QD30.1 RecName: Full=Protein Ycf2 [Cucumis sativus]

1.2e-70

100

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Query:  FLFDCIERPNELGVPYWARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFLINQFIWDPADPLFFLFQDHPFVSVFSHREFFADEEMA
        FLFDCIERPNELGVPYWARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFLINQFIWDPADPLFFLFQDHPFVSVFSHREFFADEEMA
Subjt:  FLFDCIERPNELGVPYWARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFLINQFIWDPADPLFFLFQDHPFVSVFSHREFFADEEMA

Query:  KGLLTSQPAFPTSLEKRWFINIKNTQEKYVE
        KGLLTSQPAFPTSLEKRWFINIKNTQEKYVE
Subjt:  KGLLTSQPAFPTSLEKRWFINIKNTQEKYVE

YP_009346523.1 ycf2 [Cucumis x hytivus]

2.9e-69

98.47

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Query:  FLFDCIERPNELGVPYWARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFLINQFIWDPADPLFFLFQDHPFVSVFSHREFFADEEMA
        FLFDCIERPNELGVPYWARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFLINQFIWDPADPLFFLFQDHPFVSVFSHREFFADEEMA
Subjt:  FLFDCIERPNELGVPYWARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFLINQFIWDPADPLFFLFQDHPFVSVFSHREFFADEEMA

Query:  KGLLTSQPAFPTSLEKRWFINIKNTQEKYVE
        KGLLTSQ AFPTSLEKRWFINIKNTQEKY+E
Subjt:  KGLLTSQPAFPTSLEKRWFINIKNTQEKYVE

YP_247661.1 Ycf2 [Cucumis sativus]

5.9e-70

99.24

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Query:  FLFDCIERPNELGVPYWARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFLINQFIWDPADPLFFLFQDHPFVSVFSHREFFADEEMA
        FLFDCIERPNELGVPYWARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRD SSKEQGFFLINQFIWDPADPLFFLFQDHPFVSVFSHREFFADEEMA
Subjt:  FLFDCIERPNELGVPYWARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFLINQFIWDPADPLFFLFQDHPFVSVFSHREFFADEEMA

Query:  KGLLTSQPAFPTSLEKRWFINIKNTQEKYVE
        KGLLTSQPAFPTSLEKRWFINIKNTQEKYVE
Subjt:  KGLLTSQPAFPTSLEKRWFINIKNTQEKYVE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L8I4 Uncharacterized protein

5.7e-71

100

Show/hide

Query:  FLFDCIERPNELGVPYWARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFLINQFIWDPADPLFFLFQDHPFVSVFSHREFFADEEMA
        FLFDCIERPNELGVPYWARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFLINQFIWDPADPLFFLFQDHPFVSVFSHREFFADEEMA
Subjt:  FLFDCIERPNELGVPYWARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFLINQFIWDPADPLFFLFQDHPFVSVFSHREFFADEEMA

Query:  KGLLTSQPAFPTSLEKRWFINIKNTQEKYVE
        KGLLTSQPAFPTSLEKRWFINIKNTQEKYVE
Subjt:  KGLLTSQPAFPTSLEKRWFINIKNTQEKYVE

A0A1X9Q181 Protein Ycf2

5.7e-71

100

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Query:  FLFDCIERPNELGVPYWARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFLINQFIWDPADPLFFLFQDHPFVSVFSHREFFADEEMA
        FLFDCIERPNELGVPYWARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFLINQFIWDPADPLFFLFQDHPFVSVFSHREFFADEEMA
Subjt:  FLFDCIERPNELGVPYWARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFLINQFIWDPADPLFFLFQDHPFVSVFSHREFFADEEMA

Query:  KGLLTSQPAFPTSLEKRWFINIKNTQEKYVE
        KGLLTSQPAFPTSLEKRWFINIKNTQEKYVE
Subjt:  KGLLTSQPAFPTSLEKRWFINIKNTQEKYVE

A0A218KGA5 Protein Ycf2

5.7e-71

100

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Query:  FLFDCIERPNELGVPYWARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFLINQFIWDPADPLFFLFQDHPFVSVFSHREFFADEEMA
        FLFDCIERPNELGVPYWARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFLINQFIWDPADPLFFLFQDHPFVSVFSHREFFADEEMA
Subjt:  FLFDCIERPNELGVPYWARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFLINQFIWDPADPLFFLFQDHPFVSVFSHREFFADEEMA

Query:  KGLLTSQPAFPTSLEKRWFINIKNTQEKYVE
        KGLLTSQPAFPTSLEKRWFINIKNTQEKYVE
Subjt:  KGLLTSQPAFPTSLEKRWFINIKNTQEKYVE

A0A286SBA1 Protein Ycf2

5.7e-71

100

Show/hide

Query:  FLFDCIERPNELGVPYWARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFLINQFIWDPADPLFFLFQDHPFVSVFSHREFFADEEMA
        FLFDCIERPNELGVPYWARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFLINQFIWDPADPLFFLFQDHPFVSVFSHREFFADEEMA
Subjt:  FLFDCIERPNELGVPYWARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFLINQFIWDPADPLFFLFQDHPFVSVFSHREFFADEEMA

Query:  KGLLTSQPAFPTSLEKRWFINIKNTQEKYVE
        KGLLTSQPAFPTSLEKRWFINIKNTQEKYVE
Subjt:  KGLLTSQPAFPTSLEKRWFINIKNTQEKYVE

A0A343UM94 Protein Ycf2

5.7e-71

100

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Query:  FLFDCIERPNELGVPYWARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFLINQFIWDPADPLFFLFQDHPFVSVFSHREFFADEEMA
        FLFDCIERPNELGVPYWARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFLINQFIWDPADPLFFLFQDHPFVSVFSHREFFADEEMA
Subjt:  FLFDCIERPNELGVPYWARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFLINQFIWDPADPLFFLFQDHPFVSVFSHREFFADEEMA

Query:  KGLLTSQPAFPTSLEKRWFINIKNTQEKYVE
        KGLLTSQPAFPTSLEKRWFINIKNTQEKYVE
Subjt:  KGLLTSQPAFPTSLEKRWFINIKNTQEKYVE

SwissProt top hits

e value

%identity

Alignment

B1A978 Protein Ycf2

4.0e-61

87.02

Show/hide

Query:  FLFDCIERPNELGVPYWARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFLINQFIWDPADPLFFLFQDHPFVSVFSHREFFADEEMA
        FLFDCIERPNELG PYWARSFRGKRIIYDE+DELQ NDSEFLQSGTVQYQTRDRSSKEQGFF I+QFIWDPADPLFFLF+D PFVSVFSHREFFADEEM+
Subjt:  FLFDCIERPNELGVPYWARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFLINQFIWDPADPLFFLFQDHPFVSVFSHREFFADEEMA

Query:  KGLLTSQPAFPTSLEKRWFINIKNTQEKYVE
        KGLLTSQ   PTS+ KRWF  IKNTQEK+ E
Subjt:  KGLLTSQPAFPTSLEKRWFINIKNTQEKYVE

Q09WV7 Protein Ycf2

1.8e-61

87.02

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Query:  FLFDCIERPNELGVPYWARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFLINQFIWDPADPLFFLFQDHPFVSVFSHREFFADEEMA
        FLFDCIE PNELG PYWARSFRGKRIIYDEED LQENDSEFLQSGT+QYQTRDRSSKEQGFF I+QFIWDPADPLFFLF+D PFVSVFSHREFFADEEM+
Subjt:  FLFDCIERPNELGVPYWARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFLINQFIWDPADPLFFLFQDHPFVSVFSHREFFADEEMA

Query:  KGLLTSQPAFPTSLEKRWFINIKNTQEKYVE
        KGLLTSQ   PTS+ KRWF  IKNTQEKY E
Subjt:  KGLLTSQPAFPTSLEKRWFINIKNTQEKYVE

Q0ZIV6 Protein Ycf2

5.2e-61

87.02

Show/hide

Query:  FLFDCIERPNELGVPYWARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFLINQFIWDPADPLFFLFQDHPFVSVFSHREFFADEEMA
        FLFDCIER NELG PYWARSFRGKRIIYDEEDELQENDSEFLQSGT+QYQTRDRSSKEQGFF I+QFIWDPADPLFFLF+D PFVSVFSHREFFADEEM+
Subjt:  FLFDCIERPNELGVPYWARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFLINQFIWDPADPLFFLFQDHPFVSVFSHREFFADEEMA

Query:  KGLLTSQPAFPTSLEKRWFINIKNTQEKYVE
        KGLLTSQ   PTS+ KRWF  IKNTQEK+ E
Subjt:  KGLLTSQPAFPTSLEKRWFINIKNTQEKYVE

Q2QD30 Protein Ycf2

1.5e-73

100

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Query:  FLFDCIERPNELGVPYWARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFLINQFIWDPADPLFFLFQDHPFVSVFSHREFFADEEMA
        FLFDCIERPNELGVPYWARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFLINQFIWDPADPLFFLFQDHPFVSVFSHREFFADEEMA
Subjt:  FLFDCIERPNELGVPYWARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFLINQFIWDPADPLFFLFQDHPFVSVFSHREFFADEEMA

Query:  KGLLTSQPAFPTSLEKRWFINIKNTQEKYVE
        KGLLTSQPAFPTSLEKRWFINIKNTQEKYVE
Subjt:  KGLLTSQPAFPTSLEKRWFINIKNTQEKYVE

Q49KT6 Protein Ycf2

1.2e-60

85.5

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Query:  FLFDCIERPNELGVPYWARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFLINQFIWDPADPLFFLFQDHPFVSVFSHREFFADEEMA
        FLFDCIERPN LG PYWARSFRGKRIIYDE++ELQENDSEFLQSGT+QYQTRDRSSKEQGFF I+QFIWDPADPLFFLF+D PFVSVFSHREFFADEEM+
Subjt:  FLFDCIERPNELGVPYWARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFLINQFIWDPADPLFFLFQDHPFVSVFSHREFFADEEMA

Query:  KGLLTSQPAFPTSLEKRWFINIKNTQEKYVE
        KGLLTSQ   PTS+ KRWF  IKNTQEK+ E
Subjt:  KGLLTSQPAFPTSLEKRWFINIKNTQEKYVE

Arabidopsis top hits

e value

%identity

Alignment

ATCG00860.1 Chloroplast Ycf2;ATPase, AAA type, core

1.9e-58

83.97

Show/hide

Query:  FLFDCIERPNELGVPYWARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFLINQFIWDPADPLFFLFQDHPFVSVFSHREFFADEEMA
        FLFDCIERPNELG PY A SFRGKRIIYDE+ ELQENDSEFLQSGT+QYQ RDRSSKEQGFF I+QFIWDPADPLFFLF+D PFVSVFSHREFFADEEM+
Subjt:  FLFDCIERPNELGVPYWARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFLINQFIWDPADPLFFLFQDHPFVSVFSHREFFADEEMA

Query:  KGLLTSQPAFPTSLEKRWFINIKNTQEKYVE
        KGLLTSQ   PTS+ KRWF  IKNTQEK+ E
Subjt:  KGLLTSQPAFPTSLEKRWFINIKNTQEKYVE

ATCG01280.1 Chloroplast Ycf2;ATPase, AAA type, core

1.9e-58

83.97

Show/hide

Query:  FLFDCIERPNELGVPYWARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFLINQFIWDPADPLFFLFQDHPFVSVFSHREFFADEEMA
        FLFDCIERPNELG PY A SFRGKRIIYDE+ ELQENDSEFLQSGT+QYQ RDRSSKEQGFF I+QFIWDPADPLFFLF+D PFVSVFSHREFFADEEM+
Subjt:  FLFDCIERPNELGVPYWARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFLINQFIWDPADPLFFLFQDHPFVSVFSHREFFADEEMA

Query:  KGLLTSQPAFPTSLEKRWFINIKNTQEKYVE
        KGLLTSQ   PTS+ KRWF  IKNTQEK+ E
Subjt:  KGLLTSQPAFPTSLEKRWFINIKNTQEKYVE

Sequences

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CDS sequence

Show/hide CDS sequence

ATGATAAAATTTCTATTTGATTGTATCGAAAGGCCCAATGAATTGGGAGTTCCCTATTGGGCTAGGTCATTTCGGGGCAAGCGGATCATTTATGATGAAGAGGATGAGCT
TCAAGAGAATGATTCGGAGTTCTTGCAGAGTGGAACCGTGCAGTACCAGACACGAGATAGATCTTCCAAAGAACAAGGCTTTTTTCTAATAAACCAATTCATTTGGGATC
CTGCAGATCCACTCTTTTTCCTATTCCAAGATCATCCTTTTGTCTCTGTGTTTTCACATCGAGAATTCTTTGCAGATGAAGAGATGGCAAAGGGGCTGCTTACTTCCCAA
CCAGCTTTTCCTACATCTCTAGAAAAACGCTGGTTTATCAATATCAAGAATACGCAAGAAAAGTACGTCGAGGCATGA

mRNA sequence

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Protein sequence

Show/hide protein sequence

MIKFLFDCIERPNELGVPYWARSFRGKRIIYDEEDELQENDSEFLQSGTVQYQTRDRSSKEQGFFLINQFIWDPADPLFFLFQDHPFVSVFSHREFFADEEMAKGLLTSQ
PAFPTSLEKRWFINIKNTQEKYVEA

CSPI04G06600 (gene) of Cucumber (PI 183967) v1 genome