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CSPI04G06800 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G06800
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionProtein NUCLEAR FUSION DEFECTIVE 4
Genome locationChr4:4741884..4742228
RNA-Seq ExpressionCSPI04G06800
SyntenyCSPI04G06800
Gene Ontology termsGO:0055085 - transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0022857 - transmembrane transporter activity (molecular function)
InterPro domainsIPR010658 - Nodulin-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044972.1 protein NUCLEAR FUSION DEFECTIVE 4 [Cucumis melo var. makuwa]3.7e-4185.71Show/hide
Query:  MVSQSRKWLVLVVTIWIQTFTGTNFNFSAYSSKLKSVLGISQVHLNYLATASDLGKVFGWSSRLALLHLPLSMVLFIAVFLGFIGYGFQWLLITGFISLP
        M  QSRKWLVLV TIWIQ FTGTNF+FSAYSSKLKSVLGISQV LNYLATASDLGKVFGWSS LALLHLPL +V+FIA F GFIGYGFQWLLI  FISLP
Subjt:  MVSQSRKWLVLVVTIWIQTFTGTNFNFSAYSSKLKSVLGISQVHLNYLATASDLGKVFGWSSRLALLHLPLSMVLFIAVFLGFIGYGFQWLLITGFISLP

Query:  YFLVISLLVFLS
        YFLVIS  VFLS
Subjt:  YFLVISLLVFLS

TYK16495.1 protein NUCLEAR FUSION DEFECTIVE 4 [Cucumis melo var. makuwa]7.5e-4286.61Show/hide
Query:  MVSQSRKWLVLVVTIWIQTFTGTNFNFSAYSSKLKSVLGISQVHLNYLATASDLGKVFGWSSRLALLHLPLSMVLFIAVFLGFIGYGFQWLLITGFISLP
        M  QSRKWLVLV TIWIQ FTGTNF+FSAYSSKLKSVLGISQV LNYLATASDLGKVFGWSS LALLHLPL +V+FIA FLGFIGYGFQWLLI  FISLP
Subjt:  MVSQSRKWLVLVVTIWIQTFTGTNFNFSAYSSKLKSVLGISQVHLNYLATASDLGKVFGWSSRLALLHLPLSMVLFIAVFLGFIGYGFQWLLITGFISLP

Query:  YFLVISLLVFLS
        YFLVIS  VFLS
Subjt:  YFLVISLLVFLS

XP_004149001.1 protein NUCLEAR FUSION DEFECTIVE 4 isoform X2 [Cucumis sativus]8.3e-4185.98Show/hide
Query:  MVSQSRKWLVLVVTIWIQTFTGTNFNFSAYSSKLKSVLGISQVHLNYLATASDLGKVFGWSSRLALLHLPLSMVLFIAVFLGFIGYGFQWLLITGFISLP
        M  QSRKWLVLV TIWIQ FTGTNF+FSAYSSKLKSVLGISQV LNYLATASDLGKVFGWSS LALLHLPL M +FIA FLGFIGYGFQWLLI  FISLP
Subjt:  MVSQSRKWLVLVVTIWIQTFTGTNFNFSAYSSKLKSVLGISQVHLNYLATASDLGKVFGWSSRLALLHLPLSMVLFIAVFLGFIGYGFQWLLITGFISLP

Query:  YFLVISL
        YFLV  L
Subjt:  YFLVISL

XP_008451908.1 PREDICTED: protein NUCLEAR FUSION DEFECTIVE 4 [Cucumis melo]8.3e-4185.98Show/hide
Query:  MVSQSRKWLVLVVTIWIQTFTGTNFNFSAYSSKLKSVLGISQVHLNYLATASDLGKVFGWSSRLALLHLPLSMVLFIAVFLGFIGYGFQWLLITGFISLP
        M  QSRKWLVLV TIWIQ FTGTNF+FSAYSSKLKSVLGISQV LNYLATASDLGKVFGWSS LALLHLPL +V+FIA FLGFIGYGFQWLLI  FISLP
Subjt:  MVSQSRKWLVLVVTIWIQTFTGTNFNFSAYSSKLKSVLGISQVHLNYLATASDLGKVFGWSSRLALLHLPLSMVLFIAVFLGFIGYGFQWLLITGFISLP

Query:  YFLVISL
        YFLV  L
Subjt:  YFLVISL

XP_011653229.1 protein NUCLEAR FUSION DEFECTIVE 4 isoform X1 [Cucumis sativus]1.4e-4085.98Show/hide
Query:  MVSQSRKWLVLVVTIWIQTFTGTNFNFSAYSSKLKSVLGISQVHLNYLATASDLGKVFGWSSRLALLHLPLSMVLFIAVFLGFIGYGFQWLLITGFISLP
        MV QSRKWLVLV TIWIQ FTGTNF+FSAYSSKLK VLGISQV LNYLATASDLGKVFGWSS LALLHLPL +V+FIA FLGFIGYGFQWLLI  FISLP
Subjt:  MVSQSRKWLVLVVTIWIQTFTGTNFNFSAYSSKLKSVLGISQVHLNYLATASDLGKVFGWSSRLALLHLPLSMVLFIAVFLGFIGYGFQWLLITGFISLP

Query:  YFLVISL
        YFLV  L
Subjt:  YFLVISL

TrEMBL top hitse value%identityAlignment
A0A0A0KV80 Nodulin-like domain-containing protein2.6e-4087.38Show/hide
Query:  MVSQSRKWLVLVVTIWIQTFTGTNFNFSAYSSKLKSVLGISQVHLNYLATASDLGKVFGWSSRLALLHLPLSMVLFIAVFLGFIGYGFQWLLITGFISLP
        MV QSRKWLVLV TIWIQ FTGTNF+FSAYSSKLK VLGISQV LNYLATASDLGKVFGWSS LALLHLPL +V+FIA FLGFIGYGFQWLLI  FISLP
Subjt:  MVSQSRKWLVLVVTIWIQTFTGTNFNFSAYSSKLKSVLGISQVHLNYLATASDLGKVFGWSSRLALLHLPLSMVLFIAVFLGFIGYGFQWLLITGFISLP

Query:  YFL
        YFL
Subjt:  YFL

A0A0A0L001 Nodulin-like domain-containing protein4.0e-4185.98Show/hide
Query:  MVSQSRKWLVLVVTIWIQTFTGTNFNFSAYSSKLKSVLGISQVHLNYLATASDLGKVFGWSSRLALLHLPLSMVLFIAVFLGFIGYGFQWLLITGFISLP
        M  QSRKWLVLV TIWIQ FTGTNF+FSAYSSKLKSVLGISQV LNYLATASDLGKVFGWSS LALLHLPL M +FIA FLGFIGYGFQWLLI  FISLP
Subjt:  MVSQSRKWLVLVVTIWIQTFTGTNFNFSAYSSKLKSVLGISQVHLNYLATASDLGKVFGWSSRLALLHLPLSMVLFIAVFLGFIGYGFQWLLITGFISLP

Query:  YFLVISL
        YFLV  L
Subjt:  YFLVISL

A0A1S3BTD8 protein NUCLEAR FUSION DEFECTIVE 44.0e-4185.98Show/hide
Query:  MVSQSRKWLVLVVTIWIQTFTGTNFNFSAYSSKLKSVLGISQVHLNYLATASDLGKVFGWSSRLALLHLPLSMVLFIAVFLGFIGYGFQWLLITGFISLP
        M  QSRKWLVLV TIWIQ FTGTNF+FSAYSSKLKSVLGISQV LNYLATASDLGKVFGWSS LALLHLPL +V+FIA FLGFIGYGFQWLLI  FISLP
Subjt:  MVSQSRKWLVLVVTIWIQTFTGTNFNFSAYSSKLKSVLGISQVHLNYLATASDLGKVFGWSSRLALLHLPLSMVLFIAVFLGFIGYGFQWLLITGFISLP

Query:  YFLVISL
        YFLV  L
Subjt:  YFLVISL

A0A5A7TNN7 Protein NUCLEAR FUSION DEFECTIVE 41.8e-4185.71Show/hide
Query:  MVSQSRKWLVLVVTIWIQTFTGTNFNFSAYSSKLKSVLGISQVHLNYLATASDLGKVFGWSSRLALLHLPLSMVLFIAVFLGFIGYGFQWLLITGFISLP
        M  QSRKWLVLV TIWIQ FTGTNF+FSAYSSKLKSVLGISQV LNYLATASDLGKVFGWSS LALLHLPL +V+FIA F GFIGYGFQWLLI  FISLP
Subjt:  MVSQSRKWLVLVVTIWIQTFTGTNFNFSAYSSKLKSVLGISQVHLNYLATASDLGKVFGWSSRLALLHLPLSMVLFIAVFLGFIGYGFQWLLITGFISLP

Query:  YFLVISLLVFLS
        YFLVIS  VFLS
Subjt:  YFLVISLLVFLS

A0A5D3CYC0 Protein NUCLEAR FUSION DEFECTIVE 43.6e-4286.61Show/hide
Query:  MVSQSRKWLVLVVTIWIQTFTGTNFNFSAYSSKLKSVLGISQVHLNYLATASDLGKVFGWSSRLALLHLPLSMVLFIAVFLGFIGYGFQWLLITGFISLP
        M  QSRKWLVLV TIWIQ FTGTNF+FSAYSSKLKSVLGISQV LNYLATASDLGKVFGWSS LALLHLPL +V+FIA FLGFIGYGFQWLLI  FISLP
Subjt:  MVSQSRKWLVLVVTIWIQTFTGTNFNFSAYSSKLKSVLGISQVHLNYLATASDLGKVFGWSSRLALLHLPLSMVLFIAVFLGFIGYGFQWLLITGFISLP

Query:  YFLVISLLVFLS
        YFLVIS  VFLS
Subjt:  YFLVISLLVFLS

SwissProt top hitse value%identityAlignment
F4I9E1 Protein NUCLEAR FUSION DEFECTIVE 44.3e-3267.83Show/hide
Query:  MVSQSRKWLVLVVTIWIQTFTGTNFNFSAYSSKLKSVLGISQVHLNYLATASDLGKVFGWSSRLALLHLPLSMVLFIAVFLGFIGYGFQWLLITGFISLP
        M  + RKW VLV  IWIQ  TGTNF+FSAYSS LKSVLGISQV LNYLA ASDLGK FGWSS +AL + PLS+VLF A  +GF+GYG QWL+IT  I+LP
Subjt:  MVSQSRKWLVLVVTIWIQTFTGTNFNFSAYSSKLKSVLGISQVHLNYLATASDLGKVFGWSSRLALLHLPLSMVLFIAVFLGFIGYGFQWLLITGFISLP

Query:  YFLVI--SLLVFLSI
        Y LV    LL  LSI
Subjt:  YFLVI--SLLVFLSI

Arabidopsis top hitse value%identityAlignment
AT1G31470.1 Major facilitator superfamily protein3.0e-3367.83Show/hide
Query:  MVSQSRKWLVLVVTIWIQTFTGTNFNFSAYSSKLKSVLGISQVHLNYLATASDLGKVFGWSSRLALLHLPLSMVLFIAVFLGFIGYGFQWLLITGFISLP
        M  + RKW VLV  IWIQ  TGTNF+FSAYSS LKSVLGISQV LNYLA ASDLGK FGWSS +AL + PLS+VLF A  +GF+GYG QWL+IT  I+LP
Subjt:  MVSQSRKWLVLVVTIWIQTFTGTNFNFSAYSSKLKSVLGISQVHLNYLATASDLGKVFGWSSRLALLHLPLSMVLFIAVFLGFIGYGFQWLLITGFISLP

Query:  YFLVI--SLLVFLSI
        Y LV    LL  LSI
Subjt:  YFLVI--SLLVFLSI

AT2G30300.1 Major facilitator superfamily protein9.5e-1955.81Show/hide
Query:  WLVLVVTIWIQTFTGTNFNFSAYSSKLKSVLGISQVHLNYLATASDLGKVFGWSSRLALLHLPLSMVLFIAVFLGFIGYGFQWLLI
        WL LV  +W+Q+F GTN +F AYSS+LK +L ISQ  LNYL+ ASD GKV G+ S +A ++LPL +VL     LGF GYG Q+L I
Subjt:  WLVLVVTIWIQTFTGTNFNFSAYSSKLKSVLGISQVHLNYLATASDLGKVFGWSSRLALLHLPLSMVLFIAVFLGFIGYGFQWLLI

AT3G01630.1 Major facilitator superfamily protein1.7e-2859.05Show/hide
Query:  MVSQSRKWLVLVVTIWIQTFTGTNFNFSAYSSKLKSVLGISQVHLNYLATASDLGKVFGWSSRLALLHLPLSMVLFIAVFLGFIGYGFQWLLITGFISLP
        M+   R+W VLV  IWIQ FTGTNF+FSAYSS +KS +G+SQ  LNY+A ASDLGK  GWSS  A+ + P+S VLF A  +G +GYG QWL I   I LP
Subjt:  MVSQSRKWLVLVVTIWIQTFTGTNFNFSAYSSKLKSVLGISQVHLNYLATASDLGKVFGWSSRLALLHLPLSMVLFIAVFLGFIGYGFQWLLITGFISLP

Query:  YFLVI
        Y LV+
Subjt:  YFLVI

AT4G19450.1 Major facilitator superfamily protein1.8e-3873.04Show/hide
Query:  MVSQSRKWLVLVVTIWIQTFTGTNFNFSAYSSKLKSVLGISQVHLNYLATASDLGKVFGWSSRLALLHLPLSMVLFIAVFLGFIGYGFQWLLITGFISLP
        M  QSRKW++LV TIWIQ FTGTNF+FSAYSS LKSVLGISQV LNYLA ASDLGKVFGWSS LAL++ PL  VLF A F+GF+GYG QWL+IT FISLP
Subjt:  MVSQSRKWLVLVVTIWIQTFTGTNFNFSAYSSKLKSVLGISQVHLNYLATASDLGKVFGWSSRLALLHLPLSMVLFIAVFLGFIGYGFQWLLITGFISLP

Query:  YFLVI--SLLVFLSI
        Y +V    LL  LSI
Subjt:  YFLVI--SLLVFLSI

AT5G45275.1 Major facilitator superfamily protein2.6e-3772.17Show/hide
Query:  MVSQSRKWLVLVVTIWIQTFTGTNFNFSAYSSKLKSVLGISQVHLNYLATASDLGKVFGWSSRLALLHLPLSMVLFIAVFLGFIGYGFQWLLITGFISLP
        M  QSRKW++LV TIWIQ FTGTNF+FS YSS LKSVLGISQV LNYLA ASDLGKVFGWSS LALL+ PL  VLF A  +GF+GYG QWL+IT  ISLP
Subjt:  MVSQSRKWLVLVVTIWIQTFTGTNFNFSAYSSKLKSVLGISQVHLNYLATASDLGKVFGWSSRLALLHLPLSMVLFIAVFLGFIGYGFQWLLITGFISLP

Query:  YFLVI--SLLVFLSI
        Y LV    LL  LSI
Subjt:  YFLVI--SLLVFLSI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCAGCCAGTCGCGTAAGTGGCTGGTTCTTGTGGTGACGATATGGATTCAGACATTCACCGGCACCAACTTCAATTTCTCAGCCTACTCTTCCAAACTGAAATCGGT
ATTAGGCATTTCTCAGGTTCATCTTAATTATCTCGCCACTGCCTCCGATCTCGGCAAAGTCTTTGGCTGGTCCTCTAGATTAGCTCTGCTTCATCTCCCGTTGTCGATGG
TTCTTTTCATCGCTGTTTTTTTAGGATTCATCGGCTACGGATTCCAATGGCTTCTAATCACCGGTTTCATCTCCTTACCCTATTTCCTGGTAATCTCCCTTCTTGTCTTT
CTTTCGATTCGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTCAGCCAGTCGCGTAAGTGGCTGGTTCTTGTGGTGACGATATGGATTCAGACATTCACCGGCACCAACTTCAATTTCTCAGCCTACTCTTCCAAACTGAAATCGGT
ATTAGGCATTTCTCAGGTTCATCTTAATTATCTCGCCACTGCCTCCGATCTCGGCAAAGTCTTTGGCTGGTCCTCTAGATTAGCTCTGCTTCATCTCCCGTTGTCGATGG
TTCTTTTCATCGCTGTTTTTTTAGGATTCATCGGCTACGGATTCCAATGGCTTCTAATCACCGGTTTCATCTCCTTACCCTATTTCCTGGTAATCTCCCTTCTTGTCTTT
CTTTCGATTCGTTAA
Protein sequenceShow/hide protein sequence
MVSQSRKWLVLVVTIWIQTFTGTNFNFSAYSSKLKSVLGISQVHLNYLATASDLGKVFGWSSRLALLHLPLSMVLFIAVFLGFIGYGFQWLLITGFISLPYFLVISLLVF
LSIR