; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI04G06810 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G06810
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionLate embryogenesis abundant protein
Genome locationChr4:4751404..4752062
RNA-Seq ExpressionCSPI04G06810
SyntenyCSPI04G06810
Gene Ontology termsNA
InterPro domainsIPR004926 - Late embryogenesis abundant protein, LEA_3 subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004148978.1 uncharacterized protein LOC101205531 [Cucumis sativus]3.5e-5199.01Show/hide
Query:  MATAFVRGAHTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNQSHVGGEVTPWVLDGRTGIYYPKGHEKVLDSIPDGGGAAVNTQVNWFNDEN
        MATAFVRGAHTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNQSHVGGEVTPWVLDGRTGIYYPKGHEKVL+SIPDGGGAAVNTQVNWFNDEN
Subjt:  MATAFVRGAHTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNQSHVGGEVTPWVLDGRTGIYYPKGHEKVLDSIPDGGGAAVNTQVNWFNDEN

Query:  I
        I
Subjt:  I
XP_008451903.1 PREDICTED: uncharacterized protein LOC103493056 [Cucumis melo]2.3e-5097.03Show/hide
Query:  MATAFVRGAHTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNQSHVGGEVTPWVLDGRTGIYYPKGHEKVLDSIPDGGGAAVNTQVNWFNDEN
        MATAFVRGAHTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNQSHVGGE TPWVLDGRTGIYYPKGHEKVLD IPDGGGA VNTQVNWFNDEN
Subjt:  MATAFVRGAHTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNQSHVGGEVTPWVLDGRTGIYYPKGHEKVLDSIPDGGGAAVNTQVNWFNDEN

Query:  I
        I
Subjt:  I
XP_022931383.1 uncharacterized protein LOC111437581 [Cucurbita moschata]2.2e-4592Show/hide
Query:  MATAFVRGAHTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNQSHVGGEVTPWVLDGRTGIYYPKGHEKVLDSIPDGGGAAVNTQVNWFNDEN
        MATAFVRGA TMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSN+S V GE TPWVLDGRTGIYYPKGHE VL+SIP+GGGAAVNTQVNWFNDEN
Subjt:  MATAFVRGAHTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNQSHVGGEVTPWVLDGRTGIYYPKGHEKVLDSIPDGGGAAVNTQVNWFNDEN
XP_023552297.1 uncharacterized protein LOC111810002 [Cucurbita pepo subsp. pepo]4.9e-4591Show/hide
Query:  MATAFVRGAHTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNQSHVGGEVTPWVLDGRTGIYYPKGHEKVLDSIPDGGGAAVNTQVNWFNDEN
        MATAF+RGA TMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSN+S V GE TPWVLDGRTGIYYPKGHE VL+SIP+GGGAAVNTQVNWFNDEN
Subjt:  MATAFVRGAHTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNQSHVGGEVTPWVLDGRTGIYYPKGHEKVLDSIPDGGGAAVNTQVNWFNDEN
XP_038884831.1 uncharacterized protein LOC120075477 [Benincasa hispida]6.2e-4893.07Show/hide
Query:  MATAFVRGAHTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNQSHVGGEVTPWVLDGRTGIYYPKGHEKVLDSIPDGGGAAVNTQVNWFNDEN
        MATAF RGA TMNSMFFKPIGRKGFHRKSSSPDM+RERVETESKE+KSN+SHVGGE TPWVLDGRTGIYYPKGHEKVL+SIPDGGGAAVNTQVNWFNDEN
Subjt:  MATAFVRGAHTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNQSHVGGEVTPWVLDGRTGIYYPKGHEKVLDSIPDGGGAAVNTQVNWFNDEN

Query:  I
        I
Subjt:  I
TrEMBL top hitse value%identityAlignment
A0A0A0KX78 Uncharacterized protein1.7e-5199.01Show/hide
Query:  MATAFVRGAHTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNQSHVGGEVTPWVLDGRTGIYYPKGHEKVLDSIPDGGGAAVNTQVNWFNDEN
        MATAFVRGAHTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNQSHVGGEVTPWVLDGRTGIYYPKGHEKVL+SIPDGGGAAVNTQVNWFNDEN
Subjt:  MATAFVRGAHTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNQSHVGGEVTPWVLDGRTGIYYPKGHEKVLDSIPDGGGAAVNTQVNWFNDEN

Query:  I
        I
Subjt:  I
A0A1S3BTQ2 uncharacterized protein LOC1034930561.1e-5097.03Show/hide
Query:  MATAFVRGAHTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNQSHVGGEVTPWVLDGRTGIYYPKGHEKVLDSIPDGGGAAVNTQVNWFNDEN
        MATAFVRGAHTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNQSHVGGE TPWVLDGRTGIYYPKGHEKVLD IPDGGGA VNTQVNWFNDEN
Subjt:  MATAFVRGAHTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNQSHVGGEVTPWVLDGRTGIYYPKGHEKVLDSIPDGGGAAVNTQVNWFNDEN

Query:  I
        I
Subjt:  I
A0A6J1C4X8 uncharacterized protein LOC1110083061.3e-4389Show/hide
Query:  MATAFVRGAHTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNQSHVGGEVTPWVLDGRTGIYYPKGHEKVLDSIPDGGGAAVNTQVNWFNDEN
        MATAFVRGA TMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKE+KSN+SHV GE TPW+LD RTGIYYPKGHEKVL+SIPDGGGAAVN QVN F+DEN
Subjt:  MATAFVRGAHTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNQSHVGGEVTPWVLDGRTGIYYPKGHEKVLDSIPDGGGAAVNTQVNWFNDEN
A0A6J1EYH0 uncharacterized protein LOC1114375811.1e-4592Show/hide
Query:  MATAFVRGAHTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNQSHVGGEVTPWVLDGRTGIYYPKGHEKVLDSIPDGGGAAVNTQVNWFNDEN
        MATAFVRGA TMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSN+S V GE TPWVLDGRTGIYYPKGHE VL+SIP+GGGAAVNTQVNWFNDEN
Subjt:  MATAFVRGAHTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNQSHVGGEVTPWVLDGRTGIYYPKGHEKVLDSIPDGGGAAVNTQVNWFNDEN
A0A6J1J914 uncharacterized protein LOC1114828453.1e-4591Show/hide
Query:  MATAFVRGAHTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNQSHVGGEVTPWVLDGRTGIYYPKGHEKVLDSIPDGGGAAVNTQVNWFNDEN
        MATAFVRGA +MNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSN+S V GE TPWVLDGRTGIYYPKGHE VL+SIP+GGGAAVNTQVNWFNDEN
Subjt:  MATAFVRGAHTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNQSHVGGEVTPWVLDGRTGIYYPKGHEKVLDSIPDGGGAAVNTQVNWFNDEN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G73120.1 unknown protein2.5e-1544.55Show/hide
Query:  RGAHTMNSMFFKPIGRKGFHRKSSSPDMMRERVETE----SKELKSNQSHVG-GE----VTPWVLDGRTGIYYPKGHEKVLDSI-PDGGGAAVNTQVNWF
        RGA TMN+MF KP+ RK  H+KS+S D++R+ V+TE     +E+K+ +   G GE     + WV    TGIYYPKG EKV+  + P   G+  +  VNWF
Subjt:  RGAHTMNSMFFKPIGRKGFHRKSSSPDMMRERVETE----SKELKSNQSHVG-GE----VTPWVLDGRTGIYYPKGHEKVLDSI-PDGGGAAVNTQVNWF

Query:  N
        +
Subjt:  N

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACAGCATTTGTAAGAGGGGCTCACACAATGAACTCCATGTTCTTCAAACCGATTGGGCGAAAGGGCTTCCACAGGAAAAGCTCTTCTCCAGATATGATGAGGGA
GAGAGTTGAAACAGAAAGCAAGGAACTGAAGAGCAACCAGAGCCATGTGGGGGGTGAAGTGACTCCTTGGGTGCTCGATGGGCGAACTGGAATTTATTACCCTAAAGGCC
ACGAGAAGGTCCTTGACAGCATTCCCGATGGCGGTGGGGCTGCAGTTAACACCCAGGTCAACTGGTTTAACGATGAAAACATCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCACAGCATTTGTAAGAGGGGCTCACACAATGAACTCCATGTTCTTCAAACCGATTGGGCGAAAGGGCTTCCACAGGAAAAGCTCTTCTCCAGATATGATGAGGGA
GAGAGTTGAAACAGAAAGCAAGGAACTGAAGAGCAACCAGAGCCATGTGGGGGGTGAAGTGACTCCTTGGGTGCTCGATGGGCGAACTGGAATTTATTACCCTAAAGGCC
ACGAGAAGGTCCTTGACAGCATTCCCGATGGCGGTGGGGCTGCAGTTAACACCCAGGTCAACTGGTTTAACGATGAAAACATCTAA
Protein sequenceShow/hide protein sequence
MATAFVRGAHTMNSMFFKPIGRKGFHRKSSSPDMMRERVETESKELKSNQSHVGGEVTPWVLDGRTGIYYPKGHEKVLDSIPDGGGAAVNTQVNWFNDENI