; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI04G07690 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G07690
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionglycine-rich protein 5-like
Genome locationChr4:5562686..5563175
RNA-Seq ExpressionCSPI04G07690
SyntenyCSPI04G07690
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577050.1 hypothetical protein SDJN03_24624, partial [Cucurbita argyrosperma subsp. sororia]3.1e-1760.77Show/hide
Query:  MKTYAIVLIAGGSVIGAVMILWCVCKFGRSRKKK----TITYNMPKRTPQRNLDIERGQLPKNNNNGGMTILGGAAAGLATAAVVTTLSSSGGGGGGDSG
        M+TYAIVLI  G VI + +ILWCVC +G  +KKK    T T +  + TP+ + D+E G+      NGGMTIL GAAAGLATAAVVT+L++ GGGGGG  G
Subjt:  MKTYAIVLIAGGSVIGAVMILWCVCKFGRSRKKK----TITYNMPKRTPQRNLDIERGQLPKNNNNGGMTILGGAAAGLATAAVVTTLSSSGGGGGGDSG

Query:  SGGDGDGGGGGGCGGGC-GGCGGGCGGGCG
            G  GGGGGCGGGC GGCGGGCGGGCG
Subjt:  SGGDGDGGGGGGCGGGC-GGCGGGCGGGCG

KGN53550.1 hypothetical protein Csa_015259 [Cucumis sativus]1.3e-50100Show/hide
Query:  MKTYAIVLIAGGSVIGAVMILWCVCKFGRSRKKKTITYNMPKRTPQRNLDIERGQLPKNNNNGGMTILGGAAAGLATAAVVTTLSSSGGGGGGDSGSGGD
        MKTYAIVLIAGGSVIGAVMILWCVCKFGRSRKKKTITYNMPKRTPQRNLDIERGQLPKNNNNGGMTILGGAAAGLATAAVVTTLSSSGGGGGGDSGSGGD
Subjt:  MKTYAIVLIAGGSVIGAVMILWCVCKFGRSRKKKTITYNMPKRTPQRNLDIERGQLPKNNNNGGMTILGGAAAGLATAAVVTTLSSSGGGGGGDSGSGGD

Query:  GDGGGGGGCGGGCGGCGGGCGGGCG
        GDGGGGGGCGGGCGGCGGGCGGGCG
Subjt:  GDGGGGGGCGGGCGGCGGGCGGGCG

XP_022931328.1 glycine-rich protein 5-like [Cucurbita moschata]4.1e-1762.12Show/hide
Query:  MKTYAIVLIAGGSVIGAVMILWCVCKFGRSRKKK----TITYNMPKRTPQRNLDIERGQLPKNNNNGGMTILGGAAAGLATAAVVTTLSS-SGGGGGGDS
        M+TYAIVLI  G VI + +ILWCVC +G  +KKK    T T +  + TP+ + D+E G+      NGGMTIL GAAAGLATAAVVT+L++  GGGGGG  
Subjt:  MKTYAIVLIAGGSVIGAVMILWCVCKFGRSRKKK----TITYNMPKRTPQRNLDIERGQLPKNNNNGGMTILGGAAAGLATAAVVTTLSS-SGGGGGGDS

Query:  GSGGDGDGG-GGGGCGGGC-GGCGGGCGGGCG
          GGDG GG GGGGCGGGC GGCGGGCGGGCG
Subjt:  GSGGDGDGG-GGGGCGGGC-GGCGGGCGGGCG

XP_022985127.1 glycine-rich protein 5-like [Cucurbita maxima]2.8e-1862.6Show/hide
Query:  MKTYAIVLIAGGSVIGAVMILWCVCKFGRSRKKK----TITYNMPKRTPQRNLDIERGQLPKNNNNGGMTILGGAAAGLATAAVVTTLSSSGGGGGGDSG
        M+TYAIVLI  G VI + +ILWCVC +G  +KKK    T T +  + TP+ + D+E G+      NGGMTIL GAAAGLATAAVVT+LS+ GGGGGG   
Subjt:  MKTYAIVLIAGGSVIGAVMILWCVCKFGRSRKKK----TITYNMPKRTPQRNLDIERGQLPKNNNNGGMTILGGAAAGLATAAVVTTLSSSGGGGGGDSG

Query:  SGGDGDGG-GGGGCGGGC-GGCGGGCGGGCG
         G DG GG GGGGCGGGC GGCGGGCGGGCG
Subjt:  SGGDGDGG-GGGGCGGGC-GGCGGGCGGGCG

XP_023552868.1 glycine-rich protein DOT1-like [Cucurbita pepo subsp. pepo]9.7e-1963.36Show/hide
Query:  MKTYAIVLIAGGSVIGAVMILWCVCKFGRSRKKK----TITYNMPKRTPQRNLDIERGQLPKNNNNGGMTILGGAAAGLATAAVVTTLSSSGGGGGGDSG
        M+TYAIVLI  G VI + +ILWCVC +G  +KKK    T T +  + TP+ + D+E G+      NGGMTIL GAAAGLATAAVVT+LS+ GGGGGG   
Subjt:  MKTYAIVLIAGGSVIGAVMILWCVCKFGRSRKKK----TITYNMPKRTPQRNLDIERGQLPKNNNNGGMTILGGAAAGLATAAVVTTLSSSGGGGGGDSG

Query:  SGGDGDGG-GGGGCGGGC-GGCGGGCGGGCG
         GGDG GG GGGGCGGGC GGCGGGCGGGCG
Subjt:  SGGDGDGG-GGGGCGGGC-GGCGGGCGGGCG

TrEMBL top hitse value%identityAlignment
A0A0A0KVE1 Uncharacterized protein6.1e-51100Show/hide
Query:  MKTYAIVLIAGGSVIGAVMILWCVCKFGRSRKKKTITYNMPKRTPQRNLDIERGQLPKNNNNGGMTILGGAAAGLATAAVVTTLSSSGGGGGGDSGSGGD
        MKTYAIVLIAGGSVIGAVMILWCVCKFGRSRKKKTITYNMPKRTPQRNLDIERGQLPKNNNNGGMTILGGAAAGLATAAVVTTLSSSGGGGGGDSGSGGD
Subjt:  MKTYAIVLIAGGSVIGAVMILWCVCKFGRSRKKKTITYNMPKRTPQRNLDIERGQLPKNNNNGGMTILGGAAAGLATAAVVTTLSSSGGGGGGDSGSGGD

Query:  GDGGGGGGCGGGCGGCGGGCGGGCG
        GDGGGGGGCGGGCGGCGGGCGGGCG
Subjt:  GDGGGGGGCGGGCGGCGGGCGGGCG

A0A1S3YHZ0 zinc finger protein ZIC 2-like1.2e-0955.56Show/hide
Query:  MKTYAIVLIAGGSVIGAVMILWCVCKFGRSRKKKTITYNMPKRTP-----QRNLDIERGQL-PKN---NNNGGMTILGGAAAGLATAAVVTTLSSSGGGG
        MK YAI LI  GSV   V+IL C+CK GR +K +  T N+    P     Q N D+E+G++ PK+     +GGM ILG  AA +ATAAV+T+ + SGGGG
Subjt:  MKTYAIVLIAGGSVIGAVMILWCVCKFGRSRKKKTITYNMPKRTP-----QRNLDIERGQL-PKN---NNNGGMTILGGAAAGLATAAVVTTLSSSGGGG

Query:  GGDSGSGGDGD-GGGGGGCGGGCGGCGGGCGGGCG
        GG SGSGG G  G GGGGCGGG GGCGGG  GGCG
Subjt:  GGDSGSGGDGD-GGGGGGCGGGCGGCGGGCGGGCG

A0A1U7W9C4 zinc finger protein ZIC 2-like2.6e-0955.3Show/hide
Query:  MKTYAIVLIAGGSVIGAVMILWCVCKFGRSRKKKTITYNMPKRTP-----QRNLDIERGQL-PKN---NNNGGMTILGGAAAGLATAAVVTTLSSSGGGG
        MK YAI LI  GSV   V+IL C+CK GR +K +  T N+    P     Q N D+E+G++ PK+     +GGM ILG  AA +ATAAV+T+ + SGGGG
Subjt:  MKTYAIVLIAGGSVIGAVMILWCVCKFGRSRKKKTITYNMPKRTP-----QRNLDIERGQL-PKN---NNNGGMTILGGAAAGLATAAVVTTLSSSGGGG

Query:  GGDSGSGGDGD-GGGGGGCGGGCGGCGGGCGG
        GG SGSGG G  G GGGGCGGG GGC GGCGG
Subjt:  GGDSGSGGDGD-GGGGGGCGGGCGGCGGGCGG

A0A6J1EY84 glycine-rich protein 5-like2.0e-1762.12Show/hide
Query:  MKTYAIVLIAGGSVIGAVMILWCVCKFGRSRKKK----TITYNMPKRTPQRNLDIERGQLPKNNNNGGMTILGGAAAGLATAAVVTTLSS-SGGGGGGDS
        M+TYAIVLI  G VI + +ILWCVC +G  +KKK    T T +  + TP+ + D+E G+      NGGMTIL GAAAGLATAAVVT+L++  GGGGGG  
Subjt:  MKTYAIVLIAGGSVIGAVMILWCVCKFGRSRKKK----TITYNMPKRTPQRNLDIERGQLPKNNNNGGMTILGGAAAGLATAAVVTTLSS-SGGGGGGDS

Query:  GSGGDGDGG-GGGGCGGGC-GGCGGGCGGGCG
          GGDG GG GGGGCGGGC GGCGGGCGGGCG
Subjt:  GSGGDGDGG-GGGGCGGGC-GGCGGGCGGGCG

A0A6J1J409 glycine-rich protein 5-like1.4e-1862.6Show/hide
Query:  MKTYAIVLIAGGSVIGAVMILWCVCKFGRSRKKK----TITYNMPKRTPQRNLDIERGQLPKNNNNGGMTILGGAAAGLATAAVVTTLSSSGGGGGGDSG
        M+TYAIVLI  G VI + +ILWCVC +G  +KKK    T T +  + TP+ + D+E G+      NGGMTIL GAAAGLATAAVVT+LS+ GGGGGG   
Subjt:  MKTYAIVLIAGGSVIGAVMILWCVCKFGRSRKKK----TITYNMPKRTPQRNLDIERGQLPKNNNNGGMTILGGAAAGLATAAVVTTLSSSGGGGGGDSG

Query:  SGGDGDGG-GGGGCGGGC-GGCGGGCGGGCG
         G DG GG GGGGCGGGC GGCGGGCGGGCG
Subjt:  SGGDGDGG-GGGGCGGGC-GGCGGGCGGGCG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAACTTATGCCATCGTTCTTATAGCCGGGGGGTCTGTGATAGGGGCTGTGATGATTTTATGGTGTGTTTGTAAGTTCGGAAGAAGTCGTAAAAAGAAGACAATTAC
ATATAATATGCCCAAACGCACTCCACAAAGGAACCTTGACATTGAACGTGGCCAATTACCTAAGAACAATAATAACGGTGGGATGACTATTCTCGGTGGAGCAGCTGCGG
GTTTAGCTACAGCTGCTGTTGTAACCACTTTAAGCAGCAGTGGTGGTGGAGGTGGAGGTGATTCTGGTAGTGGTGGTGATGGCGATGGCGGTGGAGGTGGCGGCTGCGGA
GGTGGCTGTGGCGGCTGCGGAGGTGGATGTGGAGGTGGCTGTGGATGA
mRNA sequenceShow/hide mRNA sequence
ATTTGGTATTCACCATTTGATATAAAAGGCAAAGAACAAGTTCTGAAGAGAGTACTTAATTGTAATTTAGTTTGAGTGTTATTAAGATCGTGATAATTTTGGAAGGAGAG
ACATGAAAACTTATGCCATCGTTCTTATAGCCGGGGGGTCTGTGATAGGGGCTGTGATGATTTTATGGTGTGTTTGTAAGTTCGGAAGAAGTCGTAAAAAGAAGACAATT
ACATATAATATGCCCAAACGCACTCCACAAAGGAACCTTGACATTGAACGTGGCCAATTACCTAAGAACAATAATAACGGTGGGATGACTATTCTCGGTGGAGCAGCTGC
GGGTTTAGCTACAGCTGCTGTTGTAACCACTTTAAGCAGCAGTGGTGGTGGAGGTGGAGGTGATTCTGGTAGTGGTGGTGATGGCGATGGCGGTGGAGGTGGCGGCTGCG
GAGGTGGCTGTGGCGGCTGCGGAGGTGGATGTGGAGGTGGCTGTGGATGA
Protein sequenceShow/hide protein sequence
MKTYAIVLIAGGSVIGAVMILWCVCKFGRSRKKKTITYNMPKRTPQRNLDIERGQLPKNNNNGGMTILGGAAAGLATAAVVTTLSSSGGGGGGDSGSGGDGDGGGGGGCG
GGCGGCGGGCGGGCG