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CSPI04G08110 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G08110
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
Genome locationChr4:5856834..5858547
RNA-Seq ExpressionCSPI04G08110
SyntenyCSPI04G08110
Gene Ontology termsGO:0005776 - autophagosome (cellular component)
GO:0061908 - phagophore (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059021.1 uncharacterized protein E6C27_scaffold233G00420 [Cucumis melo var. makuwa]6.0e-8177.67Show/hide
Query:  DEEHDAFEQNQSESDFGDSASEVFSTTSSYMEDPIHVASLSEIGCNEFGSNMLPNKAFSVYYAALHNDENDIIKGNYDWISSHIDSDGNYSSNFVSSIDS
        D E+DAFEQNQSES FGDSA+EVFSTT SYMEDPIHVAS SEI CNE GSNMLPNKAF+VYYAALHNDEN+IIKGNYD I+SHIDS              
Subjt:  DEEHDAFEQNQSESDFGDSASEVFSTTSSYMEDPIHVASLSEIGCNEFGSNMLPNKAFSVYYAALHNDENDIIKGNYDWISSHIDSDGNYSSNFVSSIDS

Query:  FGSLEDYESTDFNKEANDLSHQVELEDNCVIVDY----HDDVSSEPPNQPSFKRTISNAFFSIKRLAMEYKQLAILKGYDATKSCQGTSLAAPHTMLLRD
         GSLEDYES DFNKEANDLSHQV LEDNCVIVDY    HDDVS+EPPNQPSFKRTI NA F  KRLAMEYK+L IL+G++ATK CQG SLAAP TMLL+D
Subjt:  FGSLEDYESTDFNKEANDLSHQVELEDNCVIVDY----HDDVSSEPPNQPSFKRTISNAFFSIKRLAMEYKQLAILKGYDATKSCQGTSLAAPHTMLLRD

Query:  SDQTIQSSDSDWELL
        SDQTIQSSDS+WELL
Subjt:  SDQTIQSSDSDWELL

TYK19574.1 uncharacterized protein E5676_scaffold416G00800 [Cucumis melo var. makuwa]2.7e-8178.14Show/hide
Query:  DEEHDAFEQNQSESDFGDSASEVFSTTSSYMEDPIHVASLSEIGCNEFGSNMLPNKAFSVYYAALHNDENDIIKGNYDWISSHIDSDGNYSSNFVSSIDS
        D E+DAFEQNQSES FGDSASEVFSTT SYMEDPIHVAS SEI CNE GSNMLPNKAF+VYYAALHNDEN+IIKGNYD I+SHIDS              
Subjt:  DEEHDAFEQNQSESDFGDSASEVFSTTSSYMEDPIHVASLSEIGCNEFGSNMLPNKAFSVYYAALHNDENDIIKGNYDWISSHIDSDGNYSSNFVSSIDS

Query:  FGSLEDYESTDFNKEANDLSHQVELEDNCVIVDY----HDDVSSEPPNQPSFKRTISNAFFSIKRLAMEYKQLAILKGYDATKSCQGTSLAAPHTMLLRD
         GSLEDYES DFNKEANDLSHQV LEDNCVIVDY    HDDVS+EPPNQPSFKRTI NA F  KRLAMEYK+L IL+G++ATK CQG SLAAP TMLL+D
Subjt:  FGSLEDYESTDFNKEANDLSHQVELEDNCVIVDY----HDDVSSEPPNQPSFKRTISNAFFSIKRLAMEYKQLAILKGYDATKSCQGTSLAAPHTMLLRD

Query:  SDQTIQSSDSDWELL
        SDQTIQSSDS+WELL
Subjt:  SDQTIQSSDSDWELL

XP_011654345.1 uncharacterized protein LOC105435348 [Cucumis sativus]2.3e-9699.45Show/hide
Query:  MEDPIHVASLSEIGCNEFGSNMLPNKAFSVYYAALHNDENDIIKGNYDWISSHIDSDGNYSSNFVSSIDSFGSLEDYESTDFNKEANDLSHQVELEDNCV
        MEDPIHVASLSEIGCNEFGSNMLPNKAFSVYYAALHNDENDIIKGNYDWISSHIDSDGNYSSNFVSSIDSFGSLEDYESTDFNKEANDLSHQVELEDNCV
Subjt:  MEDPIHVASLSEIGCNEFGSNMLPNKAFSVYYAALHNDENDIIKGNYDWISSHIDSDGNYSSNFVSSIDSFGSLEDYESTDFNKEANDLSHQVELEDNCV

Query:  IVDYHDDVSSEPPNQPSFKRTISNAFFSIKRLAMEYKQLAILKGYDATKSCQGTSLAAPHTMLLRDSDQTIQSSDSDWELL
        IVDYHDDVSSEPPNQPSFKRTISNAFFSIKRLAMEYKQLAILKGYDATKSCQGTSLAAPHTMLLRDSDQTIQSSDS+WELL
Subjt:  IVDYHDDVSSEPPNQPSFKRTISNAFFSIKRLAMEYKQLAILKGYDATKSCQGTSLAAPHTMLLRDSDQTIQSSDSDWELL

TrEMBL top hitse value%identityAlignment
A0A0A0KVL5 Uncharacterized protein1.1e-9699.45Show/hide
Query:  MEDPIHVASLSEIGCNEFGSNMLPNKAFSVYYAALHNDENDIIKGNYDWISSHIDSDGNYSSNFVSSIDSFGSLEDYESTDFNKEANDLSHQVELEDNCV
        MEDPIHVASLSEIGCNEFGSNMLPNKAFSVYYAALHNDENDIIKGNYDWISSHIDSDGNYSSNFVSSIDSFGSLEDYESTDFNKEANDLSHQVELEDNCV
Subjt:  MEDPIHVASLSEIGCNEFGSNMLPNKAFSVYYAALHNDENDIIKGNYDWISSHIDSDGNYSSNFVSSIDSFGSLEDYESTDFNKEANDLSHQVELEDNCV

Query:  IVDYHDDVSSEPPNQPSFKRTISNAFFSIKRLAMEYKQLAILKGYDATKSCQGTSLAAPHTMLLRDSDQTIQSSDSDWELL
        IVDYHDDVSSEPPNQPSFKRTISNAFFSIKRLAMEYKQLAILKGYDATKSCQGTSLAAPHTMLLRDSDQTIQSSDS+WELL
Subjt:  IVDYHDDVSSEPPNQPSFKRTISNAFFSIKRLAMEYKQLAILKGYDATKSCQGTSLAAPHTMLLRDSDQTIQSSDSDWELL

A0A5A7UZW1 Uncharacterized protein2.9e-8177.67Show/hide
Query:  DEEHDAFEQNQSESDFGDSASEVFSTTSSYMEDPIHVASLSEIGCNEFGSNMLPNKAFSVYYAALHNDENDIIKGNYDWISSHIDSDGNYSSNFVSSIDS
        D E+DAFEQNQSES FGDSA+EVFSTT SYMEDPIHVAS SEI CNE GSNMLPNKAF+VYYAALHNDEN+IIKGNYD I+SHIDS              
Subjt:  DEEHDAFEQNQSESDFGDSASEVFSTTSSYMEDPIHVASLSEIGCNEFGSNMLPNKAFSVYYAALHNDENDIIKGNYDWISSHIDSDGNYSSNFVSSIDS

Query:  FGSLEDYESTDFNKEANDLSHQVELEDNCVIVDY----HDDVSSEPPNQPSFKRTISNAFFSIKRLAMEYKQLAILKGYDATKSCQGTSLAAPHTMLLRD
         GSLEDYES DFNKEANDLSHQV LEDNCVIVDY    HDDVS+EPPNQPSFKRTI NA F  KRLAMEYK+L IL+G++ATK CQG SLAAP TMLL+D
Subjt:  FGSLEDYESTDFNKEANDLSHQVELEDNCVIVDY----HDDVSSEPPNQPSFKRTISNAFFSIKRLAMEYKQLAILKGYDATKSCQGTSLAAPHTMLLRD

Query:  SDQTIQSSDSDWELL
        SDQTIQSSDS+WELL
Subjt:  SDQTIQSSDSDWELL

A0A5D3D7Q1 Uncharacterized protein1.3e-8178.14Show/hide
Query:  DEEHDAFEQNQSESDFGDSASEVFSTTSSYMEDPIHVASLSEIGCNEFGSNMLPNKAFSVYYAALHNDENDIIKGNYDWISSHIDSDGNYSSNFVSSIDS
        D E+DAFEQNQSES FGDSASEVFSTT SYMEDPIHVAS SEI CNE GSNMLPNKAF+VYYAALHNDEN+IIKGNYD I+SHIDS              
Subjt:  DEEHDAFEQNQSESDFGDSASEVFSTTSSYMEDPIHVASLSEIGCNEFGSNMLPNKAFSVYYAALHNDENDIIKGNYDWISSHIDSDGNYSSNFVSSIDS

Query:  FGSLEDYESTDFNKEANDLSHQVELEDNCVIVDY----HDDVSSEPPNQPSFKRTISNAFFSIKRLAMEYKQLAILKGYDATKSCQGTSLAAPHTMLLRD
         GSLEDYES DFNKEANDLSHQV LEDNCVIVDY    HDDVS+EPPNQPSFKRTI NA F  KRLAMEYK+L IL+G++ATK CQG SLAAP TMLL+D
Subjt:  FGSLEDYESTDFNKEANDLSHQVELEDNCVIVDY----HDDVSSEPPNQPSFKRTISNAFFSIKRLAMEYKQLAILKGYDATKSCQGTSLAAPHTMLLRD

Query:  SDQTIQSSDSDWELL
        SDQTIQSSDS+WELL
Subjt:  SDQTIQSSDSDWELL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCCAAATTATATCAGTGAAGGGGAGGAGGAAGAAGCAGAGGAGGAAGAAGCAGAGGAGGAAGAAGCAGAGGAGGAAGAAGCAGAGGAGGAAGAAGCAGAGGAGGA
AGAAGCAGAGGAGGAAGAAGCAGAGGAGGAAGAAGCAGAGGAGGAAGAAGCAGAGGAGGAAGAGGAGGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNAAGAGGAAGAAGCAGATGAAGAAGAAGAAGCAGATGAAGAAGAAGAAGAAGGAGAAGGAGAAGGATCATTTATTTCTTATTTAAAATCATTGTTGGGA
ATTGATGAAGAACATGATGCTTTTGAACAAAATCAGTCAGAAAGTGATTTTGGGGATTCTGCTAGTGAAGTATTTTCAACTACATCTTCTTATATGGAAGATCCTATTCA
TGTGGCTTCATTATCAGAAATTGGTTGCAATGAATTTGGGAGCAATATGTTGCCAAATAAAGCTTTTTCTGTCTATTATGCTGCACTTCACAATGATGAGAATGATATAA
TCAAAGGGAATTATGATTGGATTAGTTCTCACATTGACTCAGATGGAAACTACTCTTCTAATTTTGTCTCATCAATCGACTCGTTTGGGTCATTGGAAGACTACGAATCT
ACTGACTTCAACAAGGAAGCAAACGATTTGTCTCATCAAGTGGAGCTTGAAGATAACTGTGTCATCGTGGATTATCATGATGATGTCTCTAGTGAACCCCCAAACCAACC
TTCATTTAAGAGAACAATATCGAATGCTTTCTTTTCCATAAAGAGGTTGGCAATGGAGTACAAACAGCTAGCTATTTTGAAAGGATATGATGCAACAAAGAGCTGCCAAG
GAACAAGTTTGGCTGCTCCACATACAATGCTTTTGAGGGATTCTGATCAAACAATTCAATCAAGTGACTCTGACTGGGAGCTTCTTTGA
mRNA sequenceShow/hide mRNA sequence
TTGTTATTGTTATTGGAGTTTCTTAATAATATAATTGGGATTTGACCCTCATTCACATTACAACTTTCACTTTGAATCTAGGAATCAATCAAATACATTGGGAGGAAGGT
GCAAAATGTGGGAGACAATGTTATGACTTTATATTCTTAAGTTGCTGAAGTTATAATTTCTCCAACTATGGATCCAAATTATATCAGTGAAGGGGAGGAGGAAGAAGCAG
AGGAGGAAGAAGCAGAGGAGGAAGAAGCAGAGGAGGAAGAAGCAGAGGAGGAAGAAGCAGAGGAGGAAGAAGCAGAGGAGGAAGAAGCAGAGGAGGAAGAAGCAGAGGAG
GAAGAAGCAGAGGAGGAAGAGGAGGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGAGGAAGAAGCAGATGAAGAAGAAGAAGC
AGATGAAGAAGAAGAAGAAGGAGAAGGAGAAGGATCATTTATTTCTTATTTAAAATCATTGTTGGGAATTGATGAAGAACATGATGCTTTTGAACAAAATCAGTCAGAAA
GTGATTTTGGGGATTCTGCTAGTGAAGTATTTTCAACTACATCTTCTTATATGGAAGATCCTATTCATGTGGCTTCATTATCAGAAATTGGTTGCAATGAATTTGGGAGC
AATATGTTGCCAAATAAAGCTTTTTCTGTCTATTATGCTGCACTTCACAATGATGAGAATGATATAATCAAAGGGAATTATGATTGGATTAGTTCTCACATTGACTCAGA
TGGAAACTACTCTTCTAATTTTGTCTCATCAATCGACTCGTTTGGGTCATTGGAAGACTACGAATCTACTGACTTCAACAAGGAAGCAAACGATTTGTCTCATCAAGTGG
AGCTTGAAGATAACTGTGTCATCGTGGATTATCATGATGATGTCTCTAGTGAACCCCCAAACCAACCTTCATTTAAGAGAACAATATCGAATGCTTTCTTTTCCATAAAG
AGGTTGGCAATGGAGTACAAACAGCTAGCTATTTTGAAAGGATATGATGCAACAAAGAGCTGCCAAGGAACAAGTTTGGCTGCTCCACATACAATGCTTTTGAGGGATTC
TGATCAAACAATTCAATCAAGTGACTCTGACTGGGAGCTTCTTTGA
Protein sequenceShow/hide protein sequence
MDPNYISEGEEEEAEEEEAEEEEAEEEEAEEEEAEEEEAEEEEAEEEEAEEEEAEEEEEEXXXXXXXXXXXXXXXXXXEEEADEEEEADEEEEEGEGEGSFISYLKSLLG
IDEEHDAFEQNQSESDFGDSASEVFSTTSSYMEDPIHVASLSEIGCNEFGSNMLPNKAFSVYYAALHNDENDIIKGNYDWISSHIDSDGNYSSNFVSSIDSFGSLEDYES
TDFNKEANDLSHQVELEDNCVIVDYHDDVSSEPPNQPSFKRTISNAFFSIKRLAMEYKQLAILKGYDATKSCQGTSLAAPHTMLLRDSDQTIQSSDSDWELL