CuGenDBv2

Gene ID	CSPI04G08300
Organism	Cucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description	GTP-binding protein At3g49725, chloroplastic
Genome location	Chr4:6034244..6035649
RNA-Seq Expression	CSPI04G08300
Synteny	CSPI04G08300
Gene Ontology terms	GO:0005525 - GTP binding (molecular function) GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR016496 - GTPase HflX

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0056658.1 GTP-binding protein [Cucumis melo var. makuwa]

1.1e-81

90.75

Show/hide

Query:  MKLQDMIEVWNKIDYHQEGESIDDSCDDDNGEAAKSSGEDSIEGKLSSAGTNNIVEMEKGDITIKQATEEHL--GNKMEGQESDCCDDWLQDDDEDQNPW
        MKLQDMIEVWNKIDYH+EG+ ID+SCDDDNGEAA SSGEDSIEGKLSSAGTNNI+EMEKGDITI+QATEE L  GN+MEGQESDCCDDWL+DDDED+NPW
Subjt:  MKLQDMIEVWNKIDYHQEGESIDDSCDDDNGEAAKSSGEDSIEGKLSSAGTNNIVEMEKGDITIKQATEEHL--GNKMEGQESDCCDDWLQDDDEDQNPW

Query:  ADKGQGMGEDVQASLDQSGPHVRISARLGVGLGELLQLIDNKLKVQDEKLQAQNVLERNVFDRKWRPSQMESD
        ADKG+G+GEDVQASLDQSGPHVRISARLGVGLGELLQLIDNKLKVQDEKLQAQNVLERNVFDRKWRPSQME+D
Subjt:  ADKGQGMGEDVQASLDQSGPHVRISARLGVGLGELLQLIDNKLKVQDEKLQAQNVLERNVFDRKWRPSQMESD

XP_004137207.1 GTP-binding protein At3g49725, chloroplastic [Cucumis sativus]

1.0e-87

97.66

Show/hide

Query:  MKLQDMIEVWNKIDYHQEGESIDDSCDDDNGEAAKSSGEDSIEGKLSSAGTNNIVEMEKGDITIKQATEEHLGNKMEGQESDCCDDWLQDDDEDQNPWAD
        MKLQDM+EVWNKIDYHQEGESIDDSCDDDNGEAA SSGEDS EGKLSSAGTNNIVEMEKGDITIKQATEEHLGN+MEGQESDCCDDWLQDDDEDQNPWAD
Subjt:  MKLQDMIEVWNKIDYHQEGESIDDSCDDDNGEAAKSSGEDSIEGKLSSAGTNNIVEMEKGDITIKQATEEHLGNKMEGQESDCCDDWLQDDDEDQNPWAD

Query:  KGQGMGEDVQASLDQSGPHVRISARLGVGLGELLQLIDNKLKVQDEKLQAQNVLERNVFDRKWRPSQMESD
        KGQGMGEDVQASLDQSGPHVRISARLGVGLGELLQLIDNKLKVQDEKLQAQNVLERNVFDRKWRPSQMESD
Subjt:  KGQGMGEDVQASLDQSGPHVRISARLGVGLGELLQLIDNKLKVQDEKLQAQNVLERNVFDRKWRPSQMESD

XP_008462905.1 PREDICTED: GTP-binding protein At3g49725, chloroplastic isoform X1 [Cucumis melo]

1.3e-82

91.91

Show/hide

Query:  MKLQDMIEVWNKIDYHQEGESIDDSCDDDNGEAAKSSGEDSIEGKLSSAGTNNIVEMEKGDITIKQATEEHL--GNKMEGQESDCCDDWLQDDDEDQNPW
        MKLQDMIEVWNKIDYH+EG+SID+SCDDDNGEAA SSGEDSIEGKLSSAGTNNI+EMEKGDITIKQATEE L  GN+MEGQESDCCDDWL+DDDED+NPW
Subjt:  MKLQDMIEVWNKIDYHQEGESIDDSCDDDNGEAAKSSGEDSIEGKLSSAGTNNIVEMEKGDITIKQATEEHL--GNKMEGQESDCCDDWLQDDDEDQNPW

Query:  ADKGQGMGEDVQASLDQSGPHVRISARLGVGLGELLQLIDNKLKVQDEKLQAQNVLERNVFDRKWRPSQMESD
        ADKG+G+GEDVQASLDQSGPHVRISARLGVGLGELLQLIDNKLKVQDEKLQAQNVLERNVFDRKWRPSQME+D
Subjt:  ADKGQGMGEDVQASLDQSGPHVRISARLGVGLGELLQLIDNKLKVQDEKLQAQNVLERNVFDRKWRPSQMESD

XP_008462906.1 PREDICTED: GTP-binding protein At3g49725, chloroplastic isoform X2 [Cucumis melo]

1.3e-82

91.91

Show/hide

Query:  MKLQDMIEVWNKIDYHQEGESIDDSCDDDNGEAAKSSGEDSIEGKLSSAGTNNIVEMEKGDITIKQATEEHL--GNKMEGQESDCCDDWLQDDDEDQNPW
        MKLQDMIEVWNKIDYH+EG+SID+SCDDDNGEAA SSGEDSIEGKLSSAGTNNI+EMEKGDITIKQATEE L  GN+MEGQESDCCDDWL+DDDED+NPW
Subjt:  MKLQDMIEVWNKIDYHQEGESIDDSCDDDNGEAAKSSGEDSIEGKLSSAGTNNIVEMEKGDITIKQATEEHL--GNKMEGQESDCCDDWLQDDDEDQNPW

Query:  ADKGQGMGEDVQASLDQSGPHVRISARLGVGLGELLQLIDNKLKVQDEKLQAQNVLERNVFDRKWRPSQMESD
        ADKG+G+GEDVQASLDQSGPHVRISARLGVGLGELLQLIDNKLKVQDEKLQAQNVLERNVFDRKWRPSQME+D
Subjt:  ADKGQGMGEDVQASLDQSGPHVRISARLGVGLGELLQLIDNKLKVQDEKLQAQNVLERNVFDRKWRPSQMESD

XP_038892869.1 GTP-binding protein At3g49725, chloroplastic isoform X2 [Benincasa hispida]

3.7e-69

78.89

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Query:  MKLQDMIEVWNKIDYHQEGESIDDSCDDDNGEAAKSSGEDSIEGKLSS----AGTNNIVEMEKGDITIKQATE----EHLGNKMEGQESDCCDDWL-QDD
        MKL+DMIEVWNKIDYH+EG+SID+SCDDDNG+A  SSGEDSI GKLSS    AGTNN +E+EKGDIT KQATE    E+ GN+MEGQESDCC+DWL  DD
Subjt:  MKLQDMIEVWNKIDYHQEGESIDDSCDDDNGEAAKSSGEDSIEGKLSS----AGTNNIVEMEKGDITIKQATE----EHLGNKMEGQESDCCDDWL-QDD

Query:  DEDQNPWADKGQGMGEDVQASLDQSGPHVRISARLGVGLGELLQLIDNKLKVQDEKLQAQNVLERNVFDRKWRPSQMESD
        D++QNPW D+GQ MGEDVQAS DQSGPHVRISA LGVGL ELLQLIDNKLKVQDEKL+AQNVLERNVF+RKWRPSQ+E+D
Subjt:  DEDQNPWADKGQGMGEDVQASLDQSGPHVRISARLGVGLGELLQLIDNKLKVQDEKLQAQNVLERNVFDRKWRPSQMESD

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KZ07 Uncharacterized protein

5.0e-88

97.66

Show/hide

Query:  MKLQDMIEVWNKIDYHQEGESIDDSCDDDNGEAAKSSGEDSIEGKLSSAGTNNIVEMEKGDITIKQATEEHLGNKMEGQESDCCDDWLQDDDEDQNPWAD
        MKLQDM+EVWNKIDYHQEGESIDDSCDDDNGEAA SSGEDS EGKLSSAGTNNIVEMEKGDITIKQATEEHLGN+MEGQESDCCDDWLQDDDEDQNPWAD
Subjt:  MKLQDMIEVWNKIDYHQEGESIDDSCDDDNGEAAKSSGEDSIEGKLSSAGTNNIVEMEKGDITIKQATEEHLGNKMEGQESDCCDDWLQDDDEDQNPWAD

Query:  KGQGMGEDVQASLDQSGPHVRISARLGVGLGELLQLIDNKLKVQDEKLQAQNVLERNVFDRKWRPSQMESD
        KGQGMGEDVQASLDQSGPHVRISARLGVGLGELLQLIDNKLKVQDEKLQAQNVLERNVFDRKWRPSQMESD
Subjt:  KGQGMGEDVQASLDQSGPHVRISARLGVGLGELLQLIDNKLKVQDEKLQAQNVLERNVFDRKWRPSQMESD

A0A1S3CIG8 GTP-binding protein At3g49725, chloroplastic isoform X1

6.3e-83

91.91

Show/hide

Query:  MKLQDMIEVWNKIDYHQEGESIDDSCDDDNGEAAKSSGEDSIEGKLSSAGTNNIVEMEKGDITIKQATEEHL--GNKMEGQESDCCDDWLQDDDEDQNPW
        MKLQDMIEVWNKIDYH+EG+SID+SCDDDNGEAA SSGEDSIEGKLSSAGTNNI+EMEKGDITIKQATEE L  GN+MEGQESDCCDDWL+DDDED+NPW
Subjt:  MKLQDMIEVWNKIDYHQEGESIDDSCDDDNGEAAKSSGEDSIEGKLSSAGTNNIVEMEKGDITIKQATEEHL--GNKMEGQESDCCDDWLQDDDEDQNPW

Query:  ADKGQGMGEDVQASLDQSGPHVRISARLGVGLGELLQLIDNKLKVQDEKLQAQNVLERNVFDRKWRPSQMESD
        ADKG+G+GEDVQASLDQSGPHVRISARLGVGLGELLQLIDNKLKVQDEKLQAQNVLERNVFDRKWRPSQME+D
Subjt:  ADKGQGMGEDVQASLDQSGPHVRISARLGVGLGELLQLIDNKLKVQDEKLQAQNVLERNVFDRKWRPSQMESD

A0A1S3CJK3 GTP-binding protein At3g49725, chloroplastic isoform X2

6.3e-83

91.91

Show/hide

Query:  MKLQDMIEVWNKIDYHQEGESIDDSCDDDNGEAAKSSGEDSIEGKLSSAGTNNIVEMEKGDITIKQATEEHL--GNKMEGQESDCCDDWLQDDDEDQNPW
        MKLQDMIEVWNKIDYH+EG+SID+SCDDDNGEAA SSGEDSIEGKLSSAGTNNI+EMEKGDITIKQATEE L  GN+MEGQESDCCDDWL+DDDED+NPW
Subjt:  MKLQDMIEVWNKIDYHQEGESIDDSCDDDNGEAAKSSGEDSIEGKLSSAGTNNIVEMEKGDITIKQATEEHL--GNKMEGQESDCCDDWLQDDDEDQNPW

Query:  ADKGQGMGEDVQASLDQSGPHVRISARLGVGLGELLQLIDNKLKVQDEKLQAQNVLERNVFDRKWRPSQMESD
        ADKG+G+GEDVQASLDQSGPHVRISARLGVGLGELLQLIDNKLKVQDEKLQAQNVLERNVFDRKWRPSQME+D
Subjt:  ADKGQGMGEDVQASLDQSGPHVRISARLGVGLGELLQLIDNKLKVQDEKLQAQNVLERNVFDRKWRPSQMESD

A0A5A7UNJ1 GTP-binding protein

5.3e-82

90.75

Show/hide

Query:  MKLQDMIEVWNKIDYHQEGESIDDSCDDDNGEAAKSSGEDSIEGKLSSAGTNNIVEMEKGDITIKQATEEHL--GNKMEGQESDCCDDWLQDDDEDQNPW
        MKLQDMIEVWNKIDYH+EG+ ID+SCDDDNGEAA SSGEDSIEGKLSSAGTNNI+EMEKGDITI+QATEE L  GN+MEGQESDCCDDWL+DDDED+NPW
Subjt:  MKLQDMIEVWNKIDYHQEGESIDDSCDDDNGEAAKSSGEDSIEGKLSSAGTNNIVEMEKGDITIKQATEEHL--GNKMEGQESDCCDDWLQDDDEDQNPW

Query:  ADKGQGMGEDVQASLDQSGPHVRISARLGVGLGELLQLIDNKLKVQDEKLQAQNVLERNVFDRKWRPSQMESD
        ADKG+G+GEDVQASLDQSGPHVRISARLGVGLGELLQLIDNKLKVQDEKLQAQNVLERNVFDRKWRPSQME+D
Subjt:  ADKGQGMGEDVQASLDQSGPHVRISARLGVGLGELLQLIDNKLKVQDEKLQAQNVLERNVFDRKWRPSQMESD

A0A5D3C2J4 GTP-binding protein

6.3e-83

91.91

Show/hide

Query:  MKLQDMIEVWNKIDYHQEGESIDDSCDDDNGEAAKSSGEDSIEGKLSSAGTNNIVEMEKGDITIKQATEEHL--GNKMEGQESDCCDDWLQDDDEDQNPW
        MKLQDMIEVWNKIDYH+EG+SID+SCDDDNGEAA SSGEDSIEGKLSSAGTNNI+EMEKGDITIKQATEE L  GN+MEGQESDCCDDWL+DDDED+NPW
Subjt:  MKLQDMIEVWNKIDYHQEGESIDDSCDDDNGEAAKSSGEDSIEGKLSSAGTNNIVEMEKGDITIKQATEEHL--GNKMEGQESDCCDDWLQDDDEDQNPW

Query:  ADKGQGMGEDVQASLDQSGPHVRISARLGVGLGELLQLIDNKLKVQDEKLQAQNVLERNVFDRKWRPSQMESD
        ADKG+G+GEDVQASLDQSGPHVRISARLGVGLGELLQLIDNKLKVQDEKLQAQNVLERNVFDRKWRPSQME+D
Subjt:  ADKGQGMGEDVQASLDQSGPHVRISARLGVGLGELLQLIDNKLKVQDEKLQAQNVLERNVFDRKWRPSQMESD

SwissProt top hits

e value

%identity

Alignment

Q0WTB4 GTP-binding protein At3g49725, chloroplastic

9.6e-12

33.91

Show/hide

Query:  KLQDMIEVWNKIDYHQEGESIDDSCDDDNGEAAKSSGEDSIEGKLSSAGTNNIVEMEKGDITIKQATEEHLGNKMEGQESDCCDDWLQDDDEDQNPWADK
        KLQ+MIEVWNKIDY  E + +++    D+GE      ED  + K                +   +AT +   ++++  + D  D WL  +DE+    AD 
Subjt:  KLQDMIEVWNKIDYHQEGESIDDSCDDDNGEAAKSSGEDSIEGKLSSAGTNNIVEMEKGDITIKQATEEHLGNKMEGQESDCCDDWLQDDDEDQNPWADK

Query:  GQGMGEDVQASLD---QSGPHVRISARLGVGLGELLQLIDNKLKVQDEKLQAQNVLERN-VFDRKWRPSQMESD
         +       A +D   + GP VR+SA  GVGL ELL LID+K+K  ++KL++  ++ER+ +  RKWRP + + +
Subjt:  GQGMGEDVQASLD---QSGPHVRISARLGVGLGELLQLIDNKLKVQDEKLQAQNVLERN-VFDRKWRPSQMESD

Arabidopsis top hits

e value

%identity

Alignment

AT3G49725.1 GTP-binding protein, HflX

6.8e-13

33.91

Show/hide

Query:  KLQDMIEVWNKIDYHQEGESIDDSCDDDNGEAAKSSGEDSIEGKLSSAGTNNIVEMEKGDITIKQATEEHLGNKMEGQESDCCDDWLQDDDEDQNPWADK
        KLQ+MIEVWNKIDY  E + +++    D+GE      ED  + K                +   +AT +   ++++  + D  D WL  +DE+    AD 
Subjt:  KLQDMIEVWNKIDYHQEGESIDDSCDDDNGEAAKSSGEDSIEGKLSSAGTNNIVEMEKGDITIKQATEEHLGNKMEGQESDCCDDWLQDDDEDQNPWADK

Query:  GQGMGEDVQASLD---QSGPHVRISARLGVGLGELLQLIDNKLKVQDEKLQAQNVLERN-VFDRKWRPSQMESD
         +       A +D   + GP VR+SA  GVGL ELL LID+K+K  ++KL++  ++ER+ +  RKWRP + + +
Subjt:  GQGMGEDVQASLD---QSGPHVRISARLGVGLGELLQLIDNKLKVQDEKLQAQNVLERN-VFDRKWRPSQMESD

Sequences

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CDS sequence

Show/hide CDS sequence

ATGAAGCTTCAAGATATGATTGAGGTTTGGAACAAGATTGATTATCACCAAGAAGGCGAAAGTATAGATGACTCTTGTGATGATGATAATGGTGAGGCTGCTAAATCGTC
AGGAGAAGATAGTATAGAAGGAAAGCTGTCATCTGCTGGAACTAACAATATTGTTGAAATGGAAAAGGGTGATATTACAATAAAGCAAGCAACTGAAGAACATCTTGGAA
ATAAGATGGAGGGACAAGAGAGTGATTGTTGTGATGACTGGTTGCAAGATGATGATGAGGATCAAAACCCTTGGGCTGATAAAGGCCAGGGAATGGGAGAAGATGTACAG
GCTTCATTAGATCAATCTGGTCCACATGTCAGAATATCAGCTAGGTTAGGGGTTGGTTTGGGAGAGTTACTACAACTCATAGATAACAAACTGAAGGTTCAGGATGAGAA
ACTGCAAGCTCAAAACGTTTTAGAGAGGAATGTTTTTGATCGTAAATGGAGGCCATCTCAGATGGAGTCTGATTAA

mRNA sequence

Show/hide mRNA sequence

GATGTAATTAATTTGAGGATTAAATCCCTTTTCAGTTAAATATCCTCTCGGCATGTGGTGGATTGCACTGCTCCCAACCTTGATGAGCACCGATCAACTGTTTTTCAAGT
ACTTCAGCAAATAGGAGTTTCTAAAATGAAGCTTCAAGATATGATTGAGGTTTGGAACAAGATTGATTATCACCAAGAAGGCGAAAGTATAGATGACTCTTGTGATGATG
ATAATGGTGAGGCTGCTAAATCGTCAGGAGAAGATAGTATAGAAGGAAAGCTGTCATCTGCTGGAACTAACAATATTGTTGAAATGGAAAAGGGTGATATTACAATAAAG
CAAGCAACTGAAGAACATCTTGGAAATAAGATGGAGGGACAAGAGAGTGATTGTTGTGATGACTGGTTGCAAGATGATGATGAGGATCAAAACCCTTGGGCTGATAAAGG
CCAGGGAATGGGAGAAGATGTACAGGCTTCATTAGATCAATCTGGTCCACATGTCAGAATATCAGCTAGGTTAGGGGTTGGTTTGGGAGAGTTACTACAACTCATAGATA
ACAAACTGAAGGTTCAGGATGAGAAACTGCAAGCTCAAAACGTTTTAGAGAGGAATGTTTTTGATCGTAAATGGAGGCCATCTCAGATGGAGTCTGATTAATTTTGAGAA
GATTATGATTCCTTGCATCTGCAATGGCTGCAGGCAAGTGTGTGGCTATCATATCTATGAAGCACTGAATATTATTTAGTATTCATGCATGTCTTGCCTCCTTTGCTTAC
ATTTTCAGCATACGTTAAATCTTTTTTCTTTTTAGGAAAACGTTGTACTGATTATCAAGTGTGCAACTTCTGGTCCTGTACAGATAAATGGTCCTGGGATGTAATAATAA
CAATAATAAGCCTTTTGCCTTCTTTTAGTTTTCACAAATGTTGATGGTGATACAACTTACCACTCC

Protein sequence

Show/hide protein sequence

MKLQDMIEVWNKIDYHQEGESIDDSCDDDNGEAAKSSGEDSIEGKLSSAGTNNIVEMEKGDITIKQATEEHLGNKMEGQESDCCDDWLQDDDEDQNPWADKGQGMGEDVQ
ASLDQSGPHVRISARLGVGLGELLQLIDNKLKVQDEKLQAQNVLERNVFDRKWRPSQMESD

CSPI04G08300 (gene) of Cucumber (PI 183967) v1 genome