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CSPI04G08380 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G08380
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionTransposon Ty3-G Gag-Pol polyprotein
Genome locationChr4:6137955..6138425
RNA-Seq ExpressionCSPI04G08380
SyntenyCSPI04G08380
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040570.1 uncharacterized protein E6C27_scaffold262G001400 [Cucumis melo var. makuwa]1.7e-2551.52Show/hide
Query:  FSVDVEYYSVIEDLGWDYCKEEIYRELFSTKKFFKDELKW--LEEVNVVIGEKECEHLDLENKGDKGTKPSIEEPPELELKLLPPHPKYVFLVENDTLPI
        F +DVE  + IE LGWDYC+EE Y ELFSTK+F +++  +  L+EVN V G+ + E LDL+ KG+  T+ SIEEPP+LELK LP H KY +L ENDTLP+
Subjt:  FSVDVEYYSVIEDLGWDYCKEEIYRELFSTKKFFKDELKW--LEEVNVVIGEKECEHLDLENKGDKGTKPSIEEPPELELKLLPPHPKYVFLVENDTLPI

Query:  ITFASFNGIGERALLNMQKCQKKAIRWNLADI
           A  +   E+ALLNM K  KK     L ++
Subjt:  ITFASFNGIGERALLNMQKCQKKAIRWNLADI

KAA0052866.1 uncharacterized protein E6C27_scaffold33G00230 [Cucumis melo var. makuwa]4.7e-3156.74Show/hide
Query:  VMKFSVDVEYYSVIEDLGWDYCKEEIYRELFSTKKFFK--DELKWLEEVNVVIGEKECEHLDLENKGDKGTKPSIEEPPELELKLLPPHPKYVFLVENDT
        +  F  D E  +VIE LGW+Y ++E Y+ELFST++FF+  D    L+EVNVV  EK+ E LDL+ KG+K TKPSIEEPPELELK LP H KYV+L ENDT
Subjt:  VMKFSVDVEYYSVIEDLGWDYCKEEIYRELFSTKKFFK--DELKWLEEVNVVIGEKECEHLDLENKGDKGTKPSIEEPPELELKLLPPHPKYVFLVENDT

Query:  LPIITFASFNGIGERALLNMQKCQKKAIRWNLADIQGISPS
        LP+      +   E+ LLNM K  KK I W L DIQGIS S
Subjt:  LPIITFASFNGIGERALLNMQKCQKKAIRWNLADIQGISPS

KAA0054122.1 uncharacterized protein E6C27_scaffold131G00340 [Cucumis melo var. makuwa]5.1e-2558.12Show/hide
Query:  MHLNNEEMKFNVANVMKFSVDVEYYSVIEDLGWDYCKEEIYRELFSTKKFFKDE--LKWLEEVNVVIGEKECEHLDLENKGDKGTKPSIEEPPELELKLL
        M  N+EE+KFN    MKF  +   Y+ IE LGWDYCKEE Y ELFST++FF++E     LEEVNV++G+ + E LDL+ KG K  K SIEEPPE+ELK L
Subjt:  MHLNNEEMKFNVANVMKFSVDVEYYSVIEDLGWDYCKEEIYRELFSTKKFFKDE--LKWLEEVNVVIGEKECEHLDLENKGDKGTKPSIEEPPELELKLL

Query:  PPHPKYVFLVENDTLPI
        P H KY +L ENDTL I
Subjt:  PPHPKYVFLVENDTLPI

TYJ96947.1 integrase [Cucumis melo var. makuwa]1.4e-2257.63Show/hide
Query:  EEIYRELFSTKKFF-KDELKW-LEEVNVVIGEKECEHLDLENKGDKGTKPSIEEPPELELKLLPPHPKYVFLVENDTLPIITFASFNGIGERALLNMQKC
        EE Y +LF+ +KF  +DE  + LEEVNVV GEK+ E LDL+ KG+K TK SIEEPPELELK    H KY +L  NDTL II     +   E+ LLN+ K 
Subjt:  EEIYRELFSTKKFF-KDELKW-LEEVNVVIGEKECEHLDLENKGDKGTKPSIEEPPELELKLLPPHPKYVFLVENDTLPIITFASFNGIGERALLNMQKC

Query:  QKKAIRWNLADIQGISPS
         KKA  W LADIQGISPS
Subjt:  QKKAIRWNLADIQGISPS

TYK05498.1 uncharacterized protein E5676_scaffold83G002090 [Cucumis melo var. makuwa]3.0e-2558.26Show/hide
Query:  MHLNNEEMKFNVANVMKFSVDVEYYSVIEDLGWDYCKEEIYRELFSTKKFFKDE--LKWLEEVNVVIGEKECEHLDLENKGDKGTKPSIEEPPELELKLL
        MH N+EE+KFNV N MKF +D + Y+VI+  GW Y KEE+Y ELFSTK+FF++E     LEE N + GE++ E LDL+ KG K  KPSIEE  ELELK L
Subjt:  MHLNNEEMKFNVANVMKFSVDVEYYSVIEDLGWDYCKEEIYRELFSTKKFFKDE--LKWLEEVNVVIGEKECEHLDLENKGDKGTKPSIEEPPELELKLL

Query:  PPHPKYVFLVENDTL
        P H KY +L ENDT+
Subjt:  PPHPKYVFLVENDTL

TrEMBL top hitse value%identityAlignment
A0A5A7UE99 Uncharacterized protein2.5e-2558.12Show/hide
Query:  MHLNNEEMKFNVANVMKFSVDVEYYSVIEDLGWDYCKEEIYRELFSTKKFFKDE--LKWLEEVNVVIGEKECEHLDLENKGDKGTKPSIEEPPELELKLL
        M  N+EE+KFN    MKF  +   Y+ IE LGWDYCKEE Y ELFST++FF++E     LEEVNV++G+ + E LDL+ KG K  K SIEEPPE+ELK L
Subjt:  MHLNNEEMKFNVANVMKFSVDVEYYSVIEDLGWDYCKEEIYRELFSTKKFFKDE--LKWLEEVNVVIGEKECEHLDLENKGDKGTKPSIEEPPELELKLL

Query:  PPHPKYVFLVENDTLPI
        P H KY +L ENDTL I
Subjt:  PPHPKYVFLVENDTLPI

A0A5A7UF79 Uncharacterized protein2.3e-3156.74Show/hide
Query:  VMKFSVDVEYYSVIEDLGWDYCKEEIYRELFSTKKFFK--DELKWLEEVNVVIGEKECEHLDLENKGDKGTKPSIEEPPELELKLLPPHPKYVFLVENDT
        +  F  D E  +VIE LGW+Y ++E Y+ELFST++FF+  D    L+EVNVV  EK+ E LDL+ KG+K TKPSIEEPPELELK LP H KYV+L ENDT
Subjt:  VMKFSVDVEYYSVIEDLGWDYCKEEIYRELFSTKKFFK--DELKWLEEVNVVIGEKECEHLDLENKGDKGTKPSIEEPPELELKLLPPHPKYVFLVENDT

Query:  LPIITFASFNGIGERALLNMQKCQKKAIRWNLADIQGISPS
        LP+      +   E+ LLNM K  KK I W L DIQGIS S
Subjt:  LPIITFASFNGIGERALLNMQKCQKKAIRWNLADIQGISPS

A0A5D3BCU9 Integrase6.7e-2357.63Show/hide
Query:  EEIYRELFSTKKFF-KDELKW-LEEVNVVIGEKECEHLDLENKGDKGTKPSIEEPPELELKLLPPHPKYVFLVENDTLPIITFASFNGIGERALLNMQKC
        EE Y +LF+ +KF  +DE  + LEEVNVV GEK+ E LDL+ KG+K TK SIEEPPELELK    H KY +L  NDTL II     +   E+ LLN+ K 
Subjt:  EEIYRELFSTKKFF-KDELKW-LEEVNVVIGEKECEHLDLENKGDKGTKPSIEEPPELELKLLPPHPKYVFLVENDTLPIITFASFNGIGERALLNMQKC

Query:  QKKAIRWNLADIQGISPS
         KKA  W LADIQGISPS
Subjt:  QKKAIRWNLADIQGISPS

A0A5D3C0Z2 Integrase_H2C2 domain-containing protein8.5e-2651.52Show/hide
Query:  FSVDVEYYSVIEDLGWDYCKEEIYRELFSTKKFFKDELKW--LEEVNVVIGEKECEHLDLENKGDKGTKPSIEEPPELELKLLPPHPKYVFLVENDTLPI
        F +DVE  + IE LGWDYC+EE Y ELFSTK+F +++  +  L+EVN V G+ + E LDL+ KG+  T+ SIEEPP+LELK LP H KY +L ENDTLP+
Subjt:  FSVDVEYYSVIEDLGWDYCKEEIYRELFSTKKFFKDELKW--LEEVNVVIGEKECEHLDLENKGDKGTKPSIEEPPELELKLLPPHPKYVFLVENDTLPI

Query:  ITFASFNGIGERALLNMQKCQKKAIRWNLADI
           A  +   E+ALLNM K  KK     L ++
Subjt:  ITFASFNGIGERALLNMQKCQKKAIRWNLADI

A0A5D3C2R8 Uncharacterized protein1.4e-2558.26Show/hide
Query:  MHLNNEEMKFNVANVMKFSVDVEYYSVIEDLGWDYCKEEIYRELFSTKKFFKDE--LKWLEEVNVVIGEKECEHLDLENKGDKGTKPSIEEPPELELKLL
        MH N+EE+KFNV N MKF +D + Y+VI+  GW Y KEE+Y ELFSTK+FF++E     LEE N + GE++ E LDL+ KG K  KPSIEE  ELELK L
Subjt:  MHLNNEEMKFNVANVMKFSVDVEYYSVIEDLGWDYCKEEIYRELFSTKKFFKDE--LKWLEEVNVVIGEKECEHLDLENKGDKGTKPSIEEPPELELKLL

Query:  PPHPKYVFLVENDTL
        P H KY +L ENDT+
Subjt:  PPHPKYVFLVENDTL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACTTGAACAATGAAGAAATGAAATTTAATGTTGCCAACGTGATGAAATTTTCCGTTGATGTTGAGTACTACAGCGTAATAGAAGACCTTGGTTGGGACTATTGTAA
GGAAGAAATATATCGAGAACTATTTAGCACTAAAAAATTCTTTAAAGACGAGCTAAAATGGCTTGAAGAAGTAAATGTCGTAATTGGTGAAAAGGAGTGTGAACATCTGG
ACTTGGAAAACAAAGGTGATAAGGGAACAAAGCCATCGATTGAAGAACCACCAGAACTAGAGCTCAAGTTGTTGCCTCCTCACCCGAAGTATGTATTTTTAGTAGAGAAT
GACACTCTACCTATCATTACCTTTGCATCATTTAATGGTATTGGAGAAAGGGCATTATTGAACATGCAAAAATGCCAAAAGAAGGCAATAAGATGGAACCTTGCTGATAT
TCAAGGCATAAGTCCATCAAGATCAGGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCACTTGAACAATGAAGAAATGAAATTTAATGTTGCCAACGTGATGAAATTTTCCGTTGATGTTGAGTACTACAGCGTAATAGAAGACCTTGGTTGGGACTATTGTAA
GGAAGAAATATATCGAGAACTATTTAGCACTAAAAAATTCTTTAAAGACGAGCTAAAATGGCTTGAAGAAGTAAATGTCGTAATTGGTGAAAAGGAGTGTGAACATCTGG
ACTTGGAAAACAAAGGTGATAAGGGAACAAAGCCATCGATTGAAGAACCACCAGAACTAGAGCTCAAGTTGTTGCCTCCTCACCCGAAGTATGTATTTTTAGTAGAGAAT
GACACTCTACCTATCATTACCTTTGCATCATTTAATGGTATTGGAGAAAGGGCATTATTGAACATGCAAAAATGCCAAAAGAAGGCAATAAGATGGAACCTTGCTGATAT
TCAAGGCATAAGTCCATCAAGATCAGGCTAA
Protein sequenceShow/hide protein sequence
MHLNNEEMKFNVANVMKFSVDVEYYSVIEDLGWDYCKEEIYRELFSTKKFFKDELKWLEEVNVVIGEKECEHLDLENKGDKGTKPSIEEPPELELKLLPPHPKYVFLVEN
DTLPIITFASFNGIGERALLNMQKCQKKAIRWNLADIQGISPSRSG