| GenBank top hits | e value | %identity | Alignment |
|---|
| KYP38652.1 Transposon Ty3-I Gag-Pol polyprotein [Cajanus cajan] | 3.3e-58 | 38.99 | Show/hide |
Query: FSDFLERSVEIFMDDFSIFRESFKECLNSLEEVMENCEETRLLLNWEKHHCMVKEGIVLGHKVSNAGFEVDSTKIDVVSKLPPPCDVKPVRSFLGHVGFY
FSD +E+ +E+FMDDFS+F SF CL++L+ V++ C ET L+LNWEK H MV EGIVLGHK+S G EVD KI+V+ KLPPP +VK ++SFLGH GFY
Subjt: FSDFLERSVEIFMDDFSIFRESFKECLNSLEEVMENCEETRLLLNWEKHHCMVKEGIVLGHKVSNAGFEVDSTKIDVVSKLPPPCDVKPVRSFLGHVGFY
Query: RRFL----------------FVGDVAIRAILGQKKNKVIHPIYYANKVLNEAQENYTTTKKKLLVAVFTMEKFRSYILGTKVTVHSNHSAIRYLMAKNDV
RRF+ D AI A+LGQ+K KV H I+YA+KVLN+ Q NY TT+K+LL V+ +EKFR+Y++G+K+ V ++H+AI+YL+ K+D
Subjt: RRFL----------------FVGDVAIRAILGQKKNKVIHPIYYANKVLNEAQENYTTTKKKLLVAVFTMEKFRSYILGTKVTVHSNHSAIRYLMAKNDV
Query: KPR----------------------------------------------------------------------------------------------WDE
KPR WD+
Subjt: KPR----------------------------------------------------------------------------------------------WDE
Query: PFLYKFDAYHLLRRCVSKYETTDILAKYHEASYGGH
P L+K A +LLRRCV+K E DIL H + YGGH
Subjt: PFLYKFDAYHLLRRCVSKYETTDILAKYHEASYGGH
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| KYP74405.1 Transposon Ty3-I Gag-Pol polyprotein, partial [Cajanus cajan] | 1.9e-61 | 40.59 | Show/hide |
Query: FSDFLERSVEIFMDDFSIFRESFKECLNSLEEVMENCEETRLLLNWEKHHCMVKEGIVLGHKVSNAGFEVDSTKIDVVSKLPPPCDVKPVRSFLGHVGFY
FSD +E+ +EIFMDDFS+F SF CL +L V+ C ET L+LNWEK H MV EGIVLGHK+S G EVD K++V+SKLPPP +VK +RSFLGH GFY
Subjt: FSDFLERSVEIFMDDFSIFRESFKECLNSLEEVMENCEETRLLLNWEKHHCMVKEGIVLGHKVSNAGFEVDSTKIDVVSKLPPPCDVKPVRSFLGHVGFY
Query: RRFL----------------FVGDVAIRAILGQKKNKVIHPIYYANKVLNEAQENYTTTKKKLLVAVFTMEKFRSYILGTKVTVHSNHSAIRYLMAKNDV
RRF+ V D A+ A+LGQ+KNK+ H I+YA+KVLNEAQ NY TT+K+LL V+ +EKFRSY++G+K+TV ++H+AI+YL+ K+D
Subjt: RRFL----------------FVGDVAIRAILGQKKNKVIHPIYYANKVLNEAQENYTTTKKKLLVAVFTMEKFRSYILGTKVTVHSNHSAIRYLMAKNDV
Query: KPR----------------------------------------------------------------------------------------------WDE
KPR WD+
Subjt: KPR----------------------------------------------------------------------------------------------WDE
Query: PFLYKFDAYHLLRRCVSKYETTDILAKYHEASYGGHVSED
P+L+K A LLRRCVS E DIL H + YGGH + D
Subjt: PFLYKFDAYHLLRRCVSKYETTDILAKYHEASYGGHVSED
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| PIN17626.1 DNA-directed DNA polymerase [Handroanthus impetiginosus] | 1.7e-67 | 52.82 | Show/hide |
Query: MVDFSDFLERSVEIFMDDFSIFRESFKECLNSLEEVMENCEETRLLLNWEKHHCMVKEGIVLGHKVSNAGFEVDSTKIDVVSKLPPPCDVKPVRSFLGHV
M F+D +E +E+FMDDFS++ SF ECLN+L V++ CE+T L+LNWEK H MV+EGIVLGHKVSN G EVD K++ + KLPPP VK VR+FLGH
Subjt: MVDFSDFLERSVEIFMDDFSIFRESFKECLNSLEEVMENCEETRLLLNWEKHHCMVKEGIVLGHKVSNAGFEVDSTKIDVVSKLPPPCDVKPVRSFLGHV
Query: GFYRRFLFVGDVAIRAILGQKKNKVIHPIYYANKVLNEAQENYTTTKKKLLVAVFTMEKFRSYILGTKVTVHSNHSAIRYLMAKNDVKPR----------
VGD AI A+LGQ+K+K+ IYYA+K LN+AQ NYTTTKK+LL VF +KFRSY++GTKV V+++H+AIRYL+ K D KPR
Subjt: GFYRRFLFVGDVAIRAILGQKKNKVIHPIYYANKVLNEAQENYTTTKKKLLVAVFTMEKFRSYILGTKVTVHSNHSAIRYLMAKNDVKPR----------
Query: -----WDEPFLYKFDAYHLLRRCVSKYETTDILAKYHEASYGGHVSED
WD+PFL+K ++LRRCV + E D+L + H + +GGH D
Subjt: -----WDEPFLYKFDAYHLLRRCVSKYETTDILAKYHEASYGGHVSED
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| PIN22518.1 DNA-directed DNA polymerase [Handroanthus impetiginosus] | 1.8e-56 | 35.58 | Show/hide |
Query: MVDFSDFLERSVEIFMDDFSIFRESFKECLNSLEEVMENCEETRLLLNWEKHHCMVKEGIVLGHKVSNAGFEVDSTKIDVVSKLPPPCDVKPVRSFLGHV
M F+D +E +E+FMDDFS++ +SF ECLN+L V++ CE+T L+LNWEK H MV+EGIVLGHKVSN G EVD K++ + KLPPP VK VRSFLGH
Subjt: MVDFSDFLERSVEIFMDDFSIFRESFKECLNSLEEVMENCEETRLLLNWEKHHCMVKEGIVLGHKVSNAGFEVDSTKIDVVSKLPPPCDVKPVRSFLGHV
Query: GFYRRFL--------------------------------------------------------FVGDVAIRAILGQKKNKVIHPIYYANKVLNEAQENYT
GFYRRF+ D AI A+LGQ+K+K+ IYYA+K LN+AQ NYT
Subjt: GFYRRFL--------------------------------------------------------FVGDVAIRAILGQKKNKVIHPIYYANKVLNEAQENYT
Query: TTKKKLLVAVFTMEKFRSYILGTKVTVHSNHSAIRYLMAKNDVKPR------------------------------------------------------
TT+K+LL VF +KFRSY++GTKV V+++H+AIRYL+ K D KPR
Subjt: TTKKKLLVAVFTMEKFRSYILGTKVTVHSNHSAIRYLMAKNDVKPR------------------------------------------------------
Query: ------------------------------------------WDEPFLYKFDAYHLLRRCVSKYETTDILAKYHEASYGGHVSED
WD+PFL+K ++LRRCV + E DIL + H + YGGH D
Subjt: ------------------------------------------WDEPFLYKFDAYHLLRRCVSKYETTDILAKYHEASYGGHVSED
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| XP_040871056.1 uncharacterized protein LOC121174822 [Glycine max] | 1.1e-56 | 36.32 | Show/hide |
Query: FSDFLERSVEIFMDDFSIFRESFKECLNSLEEVMENCEETRLLLNWEKHHCMVKEGIVLGHKVSNAGFEVDSTKIDVVSKLPPPCDVKPVRSFLGHVGFY
FSD +E+S+E+FMDDFS+F SF CL +LE V++ C ET L+LNWEK H MV+EGIVLGHK+S G EVD KI+V+ KLPPP ++K VRSFLGH GFY
Subjt: FSDFLERSVEIFMDDFSIFRESFKECLNSLEEVMENCEETRLLLNWEKHHCMVKEGIVLGHKVSNAGFEVDSTKIDVVSKLPPPCDVKPVRSFLGHVGFY
Query: RRFL--------------------------------------------------------FVGDVAIRAILGQKKNKVIHPIYYANKVLNEAQENYTTTK
RRF+ D AI A+LGQ+ +KV H IYYA++VLNEAQ NY TT+
Subjt: RRFL--------------------------------------------------------FVGDVAIRAILGQKKNKVIHPIYYANKVLNEAQENYTTTK
Query: KKLLVAVFTMEKFRSYILGTKVTVHSNHSAIRYLMAKNDVKPR---------------------------------------------------------
K++L VF +EKFRSY++G+KVT+ ++H+AI++L+AK D KPR
Subjt: KKLLVAVFTMEKFRSYILGTKVTVHSNHSAIRYLMAKNDVKPR---------------------------------------------------------
Query: -------------------------------------WDEPFLYKFDAYHLLRRCVSKYETTDILAKYHEASYGGHVSED
WD+P L+K A ++LRRCV+K E IL H +SYGGH S D
Subjt: -------------------------------------WDEPFLYKFDAYHLLRRCVSKYETTDILAKYHEASYGGHVSED
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A151R7X5 Reverse transcriptase | 1.6e-58 | 38.99 | Show/hide |
Query: FSDFLERSVEIFMDDFSIFRESFKECLNSLEEVMENCEETRLLLNWEKHHCMVKEGIVLGHKVSNAGFEVDSTKIDVVSKLPPPCDVKPVRSFLGHVGFY
FSD +E+ +E+FMDDFS+F SF CL++L+ V++ C ET L+LNWEK H MV EGIVLGHK+S G EVD KI+V+ KLPPP +VK ++SFLGH GFY
Subjt: FSDFLERSVEIFMDDFSIFRESFKECLNSLEEVMENCEETRLLLNWEKHHCMVKEGIVLGHKVSNAGFEVDSTKIDVVSKLPPPCDVKPVRSFLGHVGFY
Query: RRFL----------------FVGDVAIRAILGQKKNKVIHPIYYANKVLNEAQENYTTTKKKLLVAVFTMEKFRSYILGTKVTVHSNHSAIRYLMAKNDV
RRF+ D AI A+LGQ+K KV H I+YA+KVLN+ Q NY TT+K+LL V+ +EKFR+Y++G+K+ V ++H+AI+YL+ K+D
Subjt: RRFL----------------FVGDVAIRAILGQKKNKVIHPIYYANKVLNEAQENYTTTKKKLLVAVFTMEKFRSYILGTKVTVHSNHSAIRYLMAKNDV
Query: KPR----------------------------------------------------------------------------------------------WDE
KPR WD+
Subjt: KPR----------------------------------------------------------------------------------------------WDE
Query: PFLYKFDAYHLLRRCVSKYETTDILAKYHEASYGGH
P L+K A +LLRRCV+K E DIL H + YGGH
Subjt: PFLYKFDAYHLLRRCVSKYETTDILAKYHEASYGGH
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| A0A151U533 Transposon Ty3-I Gag-Pol polyprotein (Fragment) | 9.0e-62 | 40.59 | Show/hide |
Query: FSDFLERSVEIFMDDFSIFRESFKECLNSLEEVMENCEETRLLLNWEKHHCMVKEGIVLGHKVSNAGFEVDSTKIDVVSKLPPPCDVKPVRSFLGHVGFY
FSD +E+ +EIFMDDFS+F SF CL +L V+ C ET L+LNWEK H MV EGIVLGHK+S G EVD K++V+SKLPPP +VK +RSFLGH GFY
Subjt: FSDFLERSVEIFMDDFSIFRESFKECLNSLEEVMENCEETRLLLNWEKHHCMVKEGIVLGHKVSNAGFEVDSTKIDVVSKLPPPCDVKPVRSFLGHVGFY
Query: RRFL----------------FVGDVAIRAILGQKKNKVIHPIYYANKVLNEAQENYTTTKKKLLVAVFTMEKFRSYILGTKVTVHSNHSAIRYLMAKNDV
RRF+ V D A+ A+LGQ+KNK+ H I+YA+KVLNEAQ NY TT+K+LL V+ +EKFRSY++G+K+TV ++H+AI+YL+ K+D
Subjt: RRFL----------------FVGDVAIRAILGQKKNKVIHPIYYANKVLNEAQENYTTTKKKLLVAVFTMEKFRSYILGTKVTVHSNHSAIRYLMAKNDV
Query: KPR----------------------------------------------------------------------------------------------WDE
KPR WD+
Subjt: KPR----------------------------------------------------------------------------------------------WDE
Query: PFLYKFDAYHLLRRCVSKYETTDILAKYHEASYGGHVSED
P+L+K A LLRRCVS E DIL H + YGGH + D
Subjt: PFLYKFDAYHLLRRCVSKYETTDILAKYHEASYGGHVSED
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| A0A2G9HJB6 Reverse transcriptase | 8.4e-68 | 52.82 | Show/hide |
Query: MVDFSDFLERSVEIFMDDFSIFRESFKECLNSLEEVMENCEETRLLLNWEKHHCMVKEGIVLGHKVSNAGFEVDSTKIDVVSKLPPPCDVKPVRSFLGHV
M F+D +E +E+FMDDFS++ SF ECLN+L V++ CE+T L+LNWEK H MV+EGIVLGHKVSN G EVD K++ + KLPPP VK VR+FLGH
Subjt: MVDFSDFLERSVEIFMDDFSIFRESFKECLNSLEEVMENCEETRLLLNWEKHHCMVKEGIVLGHKVSNAGFEVDSTKIDVVSKLPPPCDVKPVRSFLGHV
Query: GFYRRFLFVGDVAIRAILGQKKNKVIHPIYYANKVLNEAQENYTTTKKKLLVAVFTMEKFRSYILGTKVTVHSNHSAIRYLMAKNDVKPR----------
VGD AI A+LGQ+K+K+ IYYA+K LN+AQ NYTTTKK+LL VF +KFRSY++GTKV V+++H+AIRYL+ K D KPR
Subjt: GFYRRFLFVGDVAIRAILGQKKNKVIHPIYYANKVLNEAQENYTTTKKKLLVAVFTMEKFRSYILGTKVTVHSNHSAIRYLMAKNDVKPR----------
Query: -----WDEPFLYKFDAYHLLRRCVSKYETTDILAKYHEASYGGHVSED
WD+PFL+K ++LRRCV + E D+L + H + +GGH D
Subjt: -----WDEPFLYKFDAYHLLRRCVSKYETTDILAKYHEASYGGHVSED
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| A0A2G9HYD8 Reverse transcriptase | 8.7e-57 | 35.58 | Show/hide |
Query: MVDFSDFLERSVEIFMDDFSIFRESFKECLNSLEEVMENCEETRLLLNWEKHHCMVKEGIVLGHKVSNAGFEVDSTKIDVVSKLPPPCDVKPVRSFLGHV
M F+D +E +E+FMDDFS++ +SF ECLN+L V++ CE+T L+LNWEK H MV+EGIVLGHKVSN G EVD K++ + KLPPP VK VRSFLGH
Subjt: MVDFSDFLERSVEIFMDDFSIFRESFKECLNSLEEVMENCEETRLLLNWEKHHCMVKEGIVLGHKVSNAGFEVDSTKIDVVSKLPPPCDVKPVRSFLGHV
Query: GFYRRFL--------------------------------------------------------FVGDVAIRAILGQKKNKVIHPIYYANKVLNEAQENYT
GFYRRF+ D AI A+LGQ+K+K+ IYYA+K LN+AQ NYT
Subjt: GFYRRFL--------------------------------------------------------FVGDVAIRAILGQKKNKVIHPIYYANKVLNEAQENYT
Query: TTKKKLLVAVFTMEKFRSYILGTKVTVHSNHSAIRYLMAKNDVKPR------------------------------------------------------
TT+K+LL VF +KFRSY++GTKV V+++H+AIRYL+ K D KPR
Subjt: TTKKKLLVAVFTMEKFRSYILGTKVTVHSNHSAIRYLMAKNDVKPR------------------------------------------------------
Query: ------------------------------------------WDEPFLYKFDAYHLLRRCVSKYETTDILAKYHEASYGGHVSED
WD+PFL+K ++LRRCV + E DIL + H + YGGH D
Subjt: ------------------------------------------WDEPFLYKFDAYHLLRRCVSKYETTDILAKYHEASYGGHVSED
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| A0A5N6N9T2 Reverse transcriptase | 8.7e-57 | 47.74 | Show/hide |
Query: FSDFLERSVEIFMDDFSIFRESFKECLNSLEEVMENCEETRLLLNWEKHHCMVKEGIVLGHKVSNAGFEVDSTKIDVVSKLPPPCDVKPVRSFLGHVGFY
F D +E S+E+FMDDFS+F SF CL++L++++ CEE+ L+LNWEK+H MVKEGIVLGHK+SNAG EVD K+D +SKLPPP VK +RSFLGH GFY
Subjt: FSDFLERSVEIFMDDFSIFRESFKECLNSLEEVMENCEETRLLLNWEKHHCMVKEGIVLGHKVSNAGFEVDSTKIDVVSKLPPPCDVKPVRSFLGHVGFY
Query: RRFL-------------------FV-------------------------------------GDVAIRAILGQKKNKVIHPIYYANKVLNEAQENYTTTK
RRF+ FV D A+ +LGQ+K+K HPIYYA+K LN+AQENYTTT+
Subjt: RRFL-------------------FV-------------------------------------GDVAIRAILGQKKNKVIHPIYYANKVLNEAQENYTTTK
Query: KKLLVAVFTMEKFRSYILGTKVTVHSNHSAIRYLMAKNDVKPR
KKLL VF +KFRSY++ +K V+++H+A+RYL K D KPR
Subjt: KKLLVAVFTMEKFRSYILGTKVTVHSNHSAIRYLMAKNDVKPR
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04323 Retrovirus-related Pol polyprotein from transposon 17.6 | 5.5e-16 | 25.42 | Show/hide |
Query: LERSVEIFMDDFSIFRESFKECLNSLEEVMENCEETRLLLNWEKHHCMVKEGIVLGHKVSNAGFEVDSTKIDVVSKLPPPCDVKPVRSFLGHVGFYRRFL
L + +++DD +F S E L SL V E + L L +K + +E LGH ++ G + + KI+ + K P P K +++FLG G+YR+F+
Subjt: LERSVEIFMDDFSIFRESFKECLNSLEEVMENCEETRLLLNWEKHHCMVKEGIVLGHKVSNAGFEVDSTKIDVVSKLPPPCDVKPVRSFLGHVGFYRRFL
Query: ---------------------------------------------------------FVGDVAIRAILGQKKNKVIHPIYYANKVLNEAQENYTTTKKKL
DVA+ A+L Q HP+ Y ++ LNE + NY+T +K+L
Subjt: ---------------------------------------------------------FVGDVAIRAILGQKKNKVIHPIYYANKVLNEAQENYTTTKKKL
Query: LVAVFTMEKFRSYILGTKVTVHSNHSAIRYLMAKND
L V+ + FR Y+LG + S+H + +L D
Subjt: LVAVFTMEKFRSYILGTKVTVHSNHSAIRYLMAKND
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| P10394 Retrovirus-related Pol polyprotein from transposon 412 | 4.8e-12 | 24.79 | Show/hide |
Query: VDFSDFLERSVEIFMDDFSIFRESFKECLNSLEEVMENCEETRLLLNWEKHHCMVKEGIVLGHKVSNAGFEVDSTKIDVVSKLPPPCDVKPVRSFLGHVG
+ FS ++MDD + S K L +L EV C E L L+ EK + E LGHK ++ G D K DV+ P P D R F+
Subjt: VDFSDFLERSVEIFMDDFSIFRESFKECLNSLEEVMENCEETRLLLNWEKHHCMVKEGIVLGHKVSNAGFEVDSTKIDVVSKLPPPCDVKPVRSFLGHVG
Query: FYRRFL-----------------------------FV---------------------------GDVAIRAILGQKKNKVIHPIYYANKVLNEAQENYTT
+YRRF+ F+ A A+L Q N P+ YA++ + + N +T
Subjt: FYRRFL-----------------------------FV---------------------------GDVAIRAILGQKKNKVIHPIYYANKVLNEAQENYTT
Query: TKKKLLVAVFTMEKFRSYILGTKVTVHSNHSAIRYLMA
T+++L + + FR YI G TV ++H + YL +
Subjt: TKKKLLVAVFTMEKFRSYILGTKVTVHSNHSAIRYLMA
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| P20825 Retrovirus-related Pol polyprotein from transposon 297 | 1.0e-14 | 25.54 | Show/hide |
Query: LERSVEIFMDDFSIFRESFKECLNSLEEVMENCEETRLLLNWEKHHCMVKEGIVLGHKVSNAGFEVDSTKIDVVSKLPPPCDVKPVRSFLGHVGFYRRFL
L + +++DD IF S E LNS++ V + L L +K + KE LGH V+ G + + K+ + P P K +R+FLG G+YR+F+
Subjt: LERSVEIFMDDFSIFRESFKECLNSLEEVMENCEETRLLLNWEKHHCMVKEGIVLGHKVSNAGFEVDSTKIDVVSKLPPPCDVKPVRSFLGHVGFYRRFL
Query: ----------------------------------------------------FV-----GDVAIRAILGQKKNKVIHPIYYANKVLNEAQENYTTTKKKL
FV ++A+ A+L Q HPI + ++ LN+ + NY+ +K+L
Subjt: ----------------------------------------------------FV-----GDVAIRAILGQKKNKVIHPIYYANKVLNEAQENYTTTKKKL
Query: LVAVFTMEKFRSYILGTKVTVHSNHSAIRYL
L V+ + FR Y+LG + + S+H +R+L
Subjt: LVAVFTMEKFRSYILGTKVTVHSNHSAIRYL
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| Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus | 2.2e-09 | 30.85 | Show/hide |
Query: IFMDDFSIFRESFKECLNSLEEVMENCEETRLLLNWEKHHCMVKEGIVLGHKVSNAGFEVDSTKIDVVSKLPPPCDVKPVRSFLGHVGFYRRFL
+++DD +F E + +L V+ + + L +N EK H + + LG+ V+ G + D K+ +S++PPP VK ++ FLG +YR+F+
Subjt: IFMDDFSIFRESFKECLNSLEEVMENCEETRLLLNWEKHHCMVKEGIVLGHKVSNAGFEVDSTKIDVVSKLPPPCDVKPVRSFLGHVGFYRRFL
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| Q99315 Transposon Ty3-G Gag-Pol polyprotein | 6.5e-09 | 23.92 | Show/hide |
Query: RSVEIFMDDFSIFRESFKECLNSLEEVMENCEETRLLLNWEKHHCMVKEGIVLGHKVSNAGFEVDSTKIDVVSKLPPPCDVKPVRSFLGHVGFYRRF---
R V +++DD IF ES +E L+ V+E + L++ +K +E LG+ + K + P P VK + FLG + +YRRF
Subjt: RSVEIFMDDFSIFRESFKECLNSLEEVMENCEETRLLLNWEKHHCMVKEGIVLGHKVSNAGFEVDSTKIDVVSKLPPPCDVKPVRSFLGHVGFYRRF---
Query: ---------LFVGDVA------------------------------------------IRAILGQ--KKNKVIHPIYYANKVLNEAQENYTTTKKKLLVA
LF+ D + I A+L + KNK++ + Y +K L AQ+NY + +LL
Subjt: ---------LFVGDVA------------------------------------------IRAILGQ--KKNKVIHPIYYANKVLNEAQENYTTTKKKLLVA
Query: VFTMEKFRSYILGTKVTVHSNHSAIRYLMAKNDVK---PRW-DEPFLYKFDAYHL
+ + FR + G T+ ++H ++ L KN+ RW D+ Y F +L
Subjt: VFTMEKFRSYILGTKVTVHSNHSAIRYLMAKNDVK---PRW-DEPFLYKFDAYHL
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