; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CSPI04G08690 (gene) of Cucumber (PI 183967) v1 genome

Gene IDCSPI04G08690
OrganismCucumis sativus L. var. sativus cv. PI 183967 (Cucumber (PI 183967) v1)
Description50S ribosomal protein L29, chloroplastic
Genome locationChr4:6441132..6443472
RNA-Seq ExpressionCSPI04G08690
SyntenyCSPI04G08690
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001854 - Ribosomal protein L29/L35
IPR036049 - Ribosomal protein L29/L35 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004137190.1 50S ribosomal protein L29, chloroplastic [Cucumis sativus]6.0e-80100Show/hide
Query:  MINLSIASLPSTLPIPSKFLNSTSKSSFNALQIRFPFSFRLPPKTATTGRGRNSSVVMMAKREDELKDIRSKTTEEINEEVIDLKGELLMLRLQKSARNE
        MINLSIASLPSTLPIPSKFLNSTSKSSFNALQIRFPFSFRLPPKTATTGRGRNSSVVMMAKREDELKDIRSKTTEEINEEVIDLKGELLMLRLQKSARNE
Subjt:  MINLSIASLPSTLPIPSKFLNSTSKSSFNALQIRFPFSFRLPPKTATTGRGRNSSVVMMAKREDELKDIRSKTTEEINEEVIDLKGELLMLRLQKSARNE

Query:  FKSSEFRRMRKRISRMLTVRREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA
        FKSSEFRRMRKRISRMLTVRREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA
Subjt:  FKSSEFRRMRKRISRMLTVRREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA

XP_008455595.1 PREDICTED: 50S ribosomal protein L29, chloroplastic [Cucumis melo]1.7e-7492.94Show/hide
Query:  MINLSIASLPSTLPIPSKFLNSTSKSSFNALQIRFPFSFRLPPKTATTGRGRNSSVVMMAKREDELKDIRSKTTEEINEEVIDLKGELLMLRLQKSARNE
        MINLS+ASLPS LPIPSKFLNSTSKS FN LQIRFPFSF +PPKTATTG GRNSSVVMMAKRE+ELKDIR+KTTEEINEEV+DLKGELLMLRLQKSARNE
Subjt:  MINLSIASLPSTLPIPSKFLNSTSKSSFNALQIRFPFSFRLPPKTATTGRGRNSSVVMMAKREDELKDIRSKTTEEINEEVIDLKGELLMLRLQKSARNE

Query:  FKSSEFRRMRKRISRMLTVRREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA
        FKSSEFRRMRKRISRMLTV+REREIEEGVGKR+SRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA
Subjt:  FKSSEFRRMRKRISRMLTVRREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA

XP_022941582.1 50S ribosomal protein L29, chloroplastic-like [Cucurbita moschata]3.7e-6990Show/hide
Query:  MINLSIASLPSTLPIPSKFLNSTSKSSFNALQIRFPFSFRLPPKTATTGRGRNSSVVMMAKREDELKDIRSKTTEEINEEVIDLKGELLMLRLQKSARNE
        MINLSIAS PS++  PSKFL+STSKSSFN  QIRFPFSFR+PPKTA+TG GRNSSVVMMAKRE+ELK+IR+KTTEEINEEVIDLKGELLMLRLQKSARNE
Subjt:  MINLSIASLPSTLPIPSKFLNSTSKSSFNALQIRFPFSFRLPPKTATTGRGRNSSVVMMAKREDELKDIRSKTTEEINEEVIDLKGELLMLRLQKSARNE

Query:  FKSSEFRRMRKRISRMLTVRREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA
        FKSSEFRRMRKRI+RMLTV+REREIEEGVGKRLSRKLDRKWK+SIVVRPPPSLKKLREEEAAAEEAEKSA
Subjt:  FKSSEFRRMRKRISRMLTVRREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA

XP_022977189.1 50S ribosomal protein L29, chloroplastic-like [Cucurbita maxima]8.2e-6989.41Show/hide
Query:  MINLSIASLPSTLPIPSKFLNSTSKSSFNALQIRFPFSFRLPPKTATTGRGRNSSVVMMAKREDELKDIRSKTTEEINEEVIDLKGELLMLRLQKSARNE
        M+NLSIAS PS++  PSKFL+STSKSSFN  QIRFPFSFR+PPKTA+TG GRNSSVVMMAKRE+ELK+IR+KTTEEINEEVIDLKGELLMLRLQKSARNE
Subjt:  MINLSIASLPSTLPIPSKFLNSTSKSSFNALQIRFPFSFRLPPKTATTGRGRNSSVVMMAKREDELKDIRSKTTEEINEEVIDLKGELLMLRLQKSARNE

Query:  FKSSEFRRMRKRISRMLTVRREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA
        FKSSEFRRMRKRI+RMLTV+REREIEEGVGKRLSRKLDRKWK+SIVVRPPPSLKKLREEEAAAEEAEKSA
Subjt:  FKSSEFRRMRKRISRMLTVRREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA

XP_023531622.1 50S ribosomal protein L29, chloroplastic-like [Cucurbita pepo subsp. pepo]1.8e-6889.41Show/hide
Query:  MINLSIASLPSTLPIPSKFLNSTSKSSFNALQIRFPFSFRLPPKTATTGRGRNSSVVMMAKREDELKDIRSKTTEEINEEVIDLKGELLMLRLQKSARNE
        MINLSIAS PS++  PSKFL+STSKSSFN  QIRFPFSFR+PPKTA+TG GRNS VVMMAKRE+ELK+IR+KTTEEINEEVIDLKGELLMLRLQKSARNE
Subjt:  MINLSIASLPSTLPIPSKFLNSTSKSSFNALQIRFPFSFRLPPKTATTGRGRNSSVVMMAKREDELKDIRSKTTEEINEEVIDLKGELLMLRLQKSARNE

Query:  FKSSEFRRMRKRISRMLTVRREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA
        FKSSEFRRMRKRI+RMLTV+REREIEEGVGKRLSRKLDRKWK+SIVVRPPPSLKKLREEEAAAEEAEKSA
Subjt:  FKSSEFRRMRKRISRMLTVRREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA

TrEMBL top hitse value%identityAlignment
A0A0A0KVL7 Uncharacterized protein2.9e-80100Show/hide
Query:  MINLSIASLPSTLPIPSKFLNSTSKSSFNALQIRFPFSFRLPPKTATTGRGRNSSVVMMAKREDELKDIRSKTTEEINEEVIDLKGELLMLRLQKSARNE
        MINLSIASLPSTLPIPSKFLNSTSKSSFNALQIRFPFSFRLPPKTATTGRGRNSSVVMMAKREDELKDIRSKTTEEINEEVIDLKGELLMLRLQKSARNE
Subjt:  MINLSIASLPSTLPIPSKFLNSTSKSSFNALQIRFPFSFRLPPKTATTGRGRNSSVVMMAKREDELKDIRSKTTEEINEEVIDLKGELLMLRLQKSARNE

Query:  FKSSEFRRMRKRISRMLTVRREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA
        FKSSEFRRMRKRISRMLTVRREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA
Subjt:  FKSSEFRRMRKRISRMLTVRREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA

A0A1S3C2I8 50S ribosomal protein L29, chloroplastic8.2e-7592.94Show/hide
Query:  MINLSIASLPSTLPIPSKFLNSTSKSSFNALQIRFPFSFRLPPKTATTGRGRNSSVVMMAKREDELKDIRSKTTEEINEEVIDLKGELLMLRLQKSARNE
        MINLS+ASLPS LPIPSKFLNSTSKS FN LQIRFPFSF +PPKTATTG GRNSSVVMMAKRE+ELKDIR+KTTEEINEEV+DLKGELLMLRLQKSARNE
Subjt:  MINLSIASLPSTLPIPSKFLNSTSKSSFNALQIRFPFSFRLPPKTATTGRGRNSSVVMMAKREDELKDIRSKTTEEINEEVIDLKGELLMLRLQKSARNE

Query:  FKSSEFRRMRKRISRMLTVRREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA
        FKSSEFRRMRKRISRMLTV+REREIEEGVGKR+SRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA
Subjt:  FKSSEFRRMRKRISRMLTVRREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA

A0A5D3CWZ4 50S ribosomal protein L298.2e-7592.94Show/hide
Query:  MINLSIASLPSTLPIPSKFLNSTSKSSFNALQIRFPFSFRLPPKTATTGRGRNSSVVMMAKREDELKDIRSKTTEEINEEVIDLKGELLMLRLQKSARNE
        MINLS+ASLPS LPIPSKFLNSTSKS FN LQIRFPFSF +PPKTATTG GRNSSVVMMAKRE+ELKDIR+KTTEEINEEV+DLKGELLMLRLQKSARNE
Subjt:  MINLSIASLPSTLPIPSKFLNSTSKSSFNALQIRFPFSFRLPPKTATTGRGRNSSVVMMAKREDELKDIRSKTTEEINEEVIDLKGELLMLRLQKSARNE

Query:  FKSSEFRRMRKRISRMLTVRREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA
        FKSSEFRRMRKRISRMLTV+REREIEEGVGKR+SRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA
Subjt:  FKSSEFRRMRKRISRMLTVRREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA

A0A6J1FMW5 50S ribosomal protein L29, chloroplastic-like1.8e-6990Show/hide
Query:  MINLSIASLPSTLPIPSKFLNSTSKSSFNALQIRFPFSFRLPPKTATTGRGRNSSVVMMAKREDELKDIRSKTTEEINEEVIDLKGELLMLRLQKSARNE
        MINLSIAS PS++  PSKFL+STSKSSFN  QIRFPFSFR+PPKTA+TG GRNSSVVMMAKRE+ELK+IR+KTTEEINEEVIDLKGELLMLRLQKSARNE
Subjt:  MINLSIASLPSTLPIPSKFLNSTSKSSFNALQIRFPFSFRLPPKTATTGRGRNSSVVMMAKREDELKDIRSKTTEEINEEVIDLKGELLMLRLQKSARNE

Query:  FKSSEFRRMRKRISRMLTVRREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA
        FKSSEFRRMRKRI+RMLTV+REREIEEGVGKRLSRKLDRKWK+SIVVRPPPSLKKLREEEAAAEEAEKSA
Subjt:  FKSSEFRRMRKRISRMLTVRREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA

A0A6J1IQR3 50S ribosomal protein L29, chloroplastic-like3.9e-6989.41Show/hide
Query:  MINLSIASLPSTLPIPSKFLNSTSKSSFNALQIRFPFSFRLPPKTATTGRGRNSSVVMMAKREDELKDIRSKTTEEINEEVIDLKGELLMLRLQKSARNE
        M+NLSIAS PS++  PSKFL+STSKSSFN  QIRFPFSFR+PPKTA+TG GRNSSVVMMAKRE+ELK+IR+KTTEEINEEVIDLKGELLMLRLQKSARNE
Subjt:  MINLSIASLPSTLPIPSKFLNSTSKSSFNALQIRFPFSFRLPPKTATTGRGRNSSVVMMAKREDELKDIRSKTTEEINEEVIDLKGELLMLRLQKSARNE

Query:  FKSSEFRRMRKRISRMLTVRREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA
        FKSSEFRRMRKRI+RMLTV+REREIEEGVGKRLSRKLDRKWK+SIVVRPPPSLKKLREEEAAAEEAEKSA
Subjt:  FKSSEFRRMRKRISRMLTVRREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA

SwissProt top hitse value%identityAlignment
B8HMR2 50S ribosomal protein L295.6e-0431.75Show/hide
Query:  ELKDIRSKTTEEINEEVIDLKGELLMLRLQKSARNEFKSSEFRRMRKRISRMLTVRREREIEE
        ++KD+   +  E+  +++DLK +L  LRLQK+ R E K  +F+ +R ++++++T+ R+R++ +
Subjt:  ELKDIRSKTTEEINEEVIDLKGELLMLRLQKSARNEFKSSEFRRMRKRISRMLTVRREREIEE

P82248 50S ribosomal protein L29, chloroplastic2.7e-3858.62Show/hide
Query:  LSIASLPST-----LPIPSKFLNSTSKSSFNALQ---IRFPFSFRLPPKTATTGRGRNSSVVMMAKREDELKDIRSKTTEEINEEVIDLKGELLMLRLQK
        L+I SL ST     L  P K    T KSSF+ L+   +    S RL  +T        SSVV+M K+EDELK++R+KT E++NEE++ LKGEL MLRLQ+
Subjt:  LSIASLPST-----LPIPSKFLNSTSKSSFNALQ---IRFPFSFRLPPKTATTGRGRNSSVVMMAKREDELKDIRSKTTEEINEEVIDLKGELLMLRLQK

Query:  SARNEFKSSEFRRMRKRISRMLTVRREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKS
        SAR  FK S+F RMRKR++RMLTV+REREIE+GVGKRLSRKLD+ WK+SIVVRPPPSLKKL+E+  A  EAEK+
Subjt:  SARNEFKSSEFRRMRKRISRMLTVRREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKS

Q49ZG0 50S ribosomal protein L299.5e-0445.16Show/hide
Query:  KDIRSKTTEEINEEVIDLKGELLMLRLQKSARNEFKSSEFRRMRKRISRMLTVRREREIEEG
        K+IR  TT EI E++   K EL  LR Q +     +++  R +RK I+R+ TV REREIE+G
Subjt:  KDIRSKTTEEINEEVIDLKGELLMLRLQKSARNEFKSSEFRRMRKRISRMLTVRREREIEEG

Q9FJP3 50S ribosomal protein L29, chloroplastic8.5e-4563.31Show/hide
Query:  MINLSIASLPSTLPIPSKFLNS--TSKSSFNALQIRFPFSFRLPPKTATTGRGRNSSVVMMAKREDELKDIRSKTTEEINEEVIDLKGELLMLRLQKSAR
        M++LSIA+ P T  I  +   S  ++ SSF+ ++I+   S R+P     +      SVVMM+KRE ELK+IRSKTTE++ EEV+DLKGEL MLRLQKSAR
Subjt:  MINLSIASLPSTLPIPSKFLNS--TSKSSFNALQIRFPFSFRLPPKTATTGRGRNSSVVMMAKREDELKDIRSKTTEEINEEVIDLKGELLMLRLQKSAR

Query:  NEFKSSEFRRMRKRISRMLTVRREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAE
        NEFKSS+FRRM+K+++RMLTV+REREI+EG+ KRLSRKLDR+WKKSIV RPPPSLKKL+EEEAA E AE
Subjt:  NEFKSSEFRRMRKRISRMLTVRREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAE

Q9SWI6 50S ribosomal protein L29, chloroplastic1.2e-3353.25Show/hide
Query:  MINLSIASLPSTLPIPSKFLNSTSKSSFNALQIRFPFSFRLPPKTATTGRG----------RNSSVVMMAKREDELKDIRSKTTEEINEEVIDLKGELLM
        M  +S+A+      IP         ++F         S RL   TAT   G          R +++V MAKRE EL++IR+ TTE++ EEV+DLKGEL +
Subjt:  MINLSIASLPSTLPIPSKFLNSTSKSSFNALQIRFPFSFRLPPKTATTGRG----------RNSSVVMMAKREDELKDIRSKTTEEINEEVIDLKGELLM

Query:  LRLQKSARNEFKSSEFRRMRKRISRMLTVRREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREE
        LRL++SAR EFK+SEF RMRKRI+RMLTV+REREIE+G+ KRLSRKLDRKWK+SIVVRPPPSL+  +EE
Subjt:  LRLQKSARNEFKSSEFRRMRKRISRMLTVRREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREE

Arabidopsis top hitse value%identityAlignment
AT5G65220.1 Ribosomal L29 family protein6.1e-4663.31Show/hide
Query:  MINLSIASLPSTLPIPSKFLNS--TSKSSFNALQIRFPFSFRLPPKTATTGRGRNSSVVMMAKREDELKDIRSKTTEEINEEVIDLKGELLMLRLQKSAR
        M++LSIA+ P T  I  +   S  ++ SSF+ ++I+   S R+P     +      SVVMM+KRE ELK+IRSKTTE++ EEV+DLKGEL MLRLQKSAR
Subjt:  MINLSIASLPSTLPIPSKFLNS--TSKSSFNALQIRFPFSFRLPPKTATTGRGRNSSVVMMAKREDELKDIRSKTTEEINEEVIDLKGELLMLRLQKSAR

Query:  NEFKSSEFRRMRKRISRMLTVRREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAE
        NEFKSS+FRRM+K+++RMLTV+REREI+EG+ KRLSRKLDR+WKKSIV RPPPSLKKL+EEEAA E AE
Subjt:  NEFKSSEFRRMRKRISRMLTVRREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAAACCTTTCAATTGCTTCTTTACCTTCCACCCTTCCTATCCCTTCAAAATTTCTTAATTCTACTTCCAAATCCTCCTTCAATGCCCTTCAAATCCGTTTCCCATT
TTCCTTTCGCCTTCCTCCTAAAACTGCAACTACTGGAAGAGGCCGAAATTCGTCGGTGGTAATGATGGCCAAGAGGGAGGACGAATTGAAGGATATCAGGTCCAAAACTA
CTGAGGAAATAAACGAAGAGGTCATCGATCTTAAGGGTGAACTTCTTATGCTTCGTCTTCAAAAATCAGCCCGCAATGAGTTTAAGTCTAGCGAATTCCGCCGCATGCGC
AAACGGATTTCTCGGATGCTAACAGTAAGACGAGAGAGAGAGATTGAAGAGGGTGTGGGCAAAAGGCTGTCAAGAAAGTTAGATAGAAAGTGGAAGAAAAGTATTGTTGT
CAGACCACCTCCATCTCTGAAGAAGTTGCGAGAGGAAGAAGCAGCAGCTGAAGAAGCTGAGAAATCTGCTTGA
mRNA sequenceShow/hide mRNA sequence
CTGGTGGATTACTAGGGGCAAGAGAGGGTAATAAAGGATCTCGAAAAATAACATTAGAACTACTGGGAGCTTATCTTATTCTTCAATTCCACAGCGCTCTTACAACCTTC
GAAGATGATAAACCTTTCAATTGCTTCTTTACCTTCCACCCTTCCTATCCCTTCAAAATTTCTTAATTCTACTTCCAAATCCTCCTTCAATGCCCTTCAAATCCGTTTCC
CATTTTCCTTTCGCCTTCCTCCTAAAACTGCAACTACTGGAAGAGGCCGAAATTCGTCGGTGGTAATGATGGCCAAGAGGGAGGACGAATTGAAGGATATCAGGTCCAAA
ACTACTGAGGAAATAAACGAAGAGGTCATCGATCTTAAGGGTGAACTTCTTATGCTTCGTCTTCAAAAATCAGCCCGCAATGAGTTTAAGTCTAGCGAATTCCGCCGCAT
GCGCAAACGGATTTCTCGGATGCTAACAGTAAGACGAGAGAGAGAGATTGAAGAGGGTGTGGGCAAAAGGCTGTCAAGAAAGTTAGATAGAAAGTGGAAGAAAAGTATTG
TTGTCAGACCACCTCCATCTCTGAAGAAGTTGCGAGAGGAAGAAGCAGCAGCTGAAGAAGCTGAGAAATCTGCTTGATCTAATCAGATACATGCTCTCATTCAATCTTTA
TGAGTTTGAAGTTGTTGAGAATTGAGAACGCTGTTTAAACAACACTTTAGAAAATATTTTTTTTCCAACCTAAACATTCTGATTCTTGTACTTAGCGTATGGACAAATGG
AAATAGATTTCGAGTGGATCACGTTGAATTTATATACTTTCATTCCTTAATTTAAATTTAGGGAAGGATATGTTTAAGAGTGATTTTGACATGCGAAGAGTATGTTTGTT
TGGAAGTGATACATTTGATTTTGTAATATTAATTTTCAAACAATCAAATTTATGTTTGGT
Protein sequenceShow/hide protein sequence
MINLSIASLPSTLPIPSKFLNSTSKSSFNALQIRFPFSFRLPPKTATTGRGRNSSVVMMAKREDELKDIRSKTTEEINEEVIDLKGELLMLRLQKSARNEFKSSEFRRMR
KRISRMLTVRREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA